RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 HBG1P69891 147 aa6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 HBG2P69892 147 aa6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 ATP6V1FQ16864 119 aa6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 Q6ZRG5 221 aa6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 STX12Q86Y82 276 aa6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 OR1L4Q8NGR5 311 aa6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 LRRC20Q8TCA0 184 aa6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 PFDN5Q99471 154 aa6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 NDUFAF3Q9BU61 184 aa6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 NMES1Q9C002 83 aa6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 GPN1Q9HCN4 374 aaPredicted RBP6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 SLC39A9Q9NUM3 307 aa6.44□□□□□ -1.38
PDLIM5-209ENST00000506632 TRAV12-2A0A075B6T6 113 aa6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 TRAV5A0A0B4J249 113 aa6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 LYRM9A8MSI8 78 aa6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 PRAC2D3DTV9 90 aa6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 INMT-MINDY4F8WBC2 141 aa6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 H0YIZ8 118 aa6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 H3BTX0 84 aa6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 ZNF253O75346 499 aa6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 SIX6O95475 246 aa6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 SNRPCP09234 159 aaKnown RBP6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 PRB4P10163 310 aaPredicted RBP6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 RHOBP62745 196 aa6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 BAXQ07812 192 aa6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 GUK1Q16774 197 aa6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 TMEM256Q8N2U0 113 aa6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 MARVELD1Q9BSK0 173 aa6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 TMEM208Q9BTX3 173 aa6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 PXMP4Q9Y6I8 212 aa6.43□□□□□ -1.38
PDLIM5-209ENST00000506632 E5RGE8 158 aa6.42□□□□□ -1.38
PDLIM5-209ENST00000506632 MPDU1O75352 247 aa6.42□□□□□ -1.38
PDLIM5-209ENST00000506632 P0DMU3 169 aa6.42□□□□□ -1.38
PDLIM5-209ENST00000506632 FAM231AP0DMU4 169 aa6.42□□□□□ -1.38
PDLIM5-209ENST00000506632 FAM231CP0DMU5 169 aa6.42□□□□□ -1.38
PDLIM5-209ENST00000506632 AZU1P20160 251 aa6.42□□□□□ -1.38
PDLIM5-209ENST00000506632 FGF7P21781 194 aa6.42□□□□□ -1.38
PDLIM5-209ENST00000506632 CDKN1BP46527 198 aa6.42□□□□□ -1.38
PDLIM5-209ENST00000506632 H2BFSP57053 126 aa6.42□□□□□ -1.38
PDLIM5-209ENST00000506632 TAS2R60P59551 318 aa6.42□□□□□ -1.38
PDLIM5-209ENST00000506632 DAD1P61803 113 aa6.42□□□□□ -1.38
PDLIM5-209ENST00000506632 NHLH2Q02577 135 aa6.42□□□□□ -1.38
PDLIM5-209ENST00000506632 POM121L12Q8N7R1 296 aa6.42□□□□□ -1.38
PDLIM5-209ENST00000506632 NPCDR1Q9BY65 106 aa6.42□□□□□ -1.38
PDLIM5-209ENST00000506632 ZNF586Q9NXT0 402 aa6.42□□□□□ -1.38
PDLIM5-209ENST00000506632 OR5AC2Q9NZP5 309 aa6.42□□□□□ -1.38
PDLIM5-209ENST00000506632 TMEM14CQ9P0S9 112 aa6.42□□□□□ -1.38
PDLIM5-209ENST00000506632 TRBV19A0A075B6N1 114 aa6.41□□□□□ -1.38
PDLIM5-209ENST00000506632 NPIPB6E9PJ23 425 aa6.41□□□□□ -1.38
PDLIM5-209ENST00000506632 NDUFB4O95168 129 aa6.41□□□□□ -1.38
PDLIM5-209ENST00000506632 RLN2P04090 185 aa6.41□□□□□ -1.38
PDLIM5-209ENST00000506632 CYCSP99999 105 aaKnown RBP6.41□□□□□ -1.38
PDLIM5-209ENST00000506632 KIR3DS1Q14943 382 aa6.41□□□□□ -1.38
PDLIM5-209ENST00000506632 GCSAMLQ5JQS6 135 aa6.41□□□□□ -1.38
PDLIM5-209ENST00000506632 OR5C1Q8NGR4 320 aa6.41□□□□□ -1.38
PDLIM5-209ENST00000506632 MRPL53Q96EL3 112 aaKnown RBP6.41□□□□□ -1.38
PDLIM5-209ENST00000506632 ODF3Q96PU9 254 aa6.41□□□□□ -1.38
PDLIM5-209ENST00000506632 LINC01587Q99440 93 aa6.41□□□□□ -1.38
PDLIM5-209ENST00000506632 C20orf144Q9BQM9 153 aa6.41□□□□□ -1.38
PDLIM5-209ENST00000506632 SLC25A31Q9H0C2 315 aa6.41□□□□□ -1.38
PDLIM5-209ENST00000506632 HECTD4Q9Y4D8 3996 aa6.41□□□□□ -1.38
PDLIM5-209ENST00000506632 H3BS24 57 aa6.4□□□□□ -1.38
PDLIM5-209ENST00000506632 H7BYZ3 331 aa6.4□□□□□ -1.38
PDLIM5-209ENST00000506632 CT45A10P0DMU9 189 aa6.4□□□□□ -1.38
PDLIM5-209ENST00000506632 HIST1H1EP10412 219 aaKnown RBP6.4□□□□□ -1.38
PDLIM5-209ENST00000506632 PDE6HQ13956 83 aa6.4□□□□□ -1.38
PDLIM5-209ENST00000506632 LRRC37A5PQ49AS3 106 aa6.4□□□□□ -1.38
PDLIM5-209ENST00000506632 GFI1BQ5VTD9 330 aa6.4□□□□□ -1.38
PDLIM5-209ENST00000506632 TMEM88Q6PEY1 159 aa6.4□□□□□ -1.38
PDLIM5-209ENST00000506632 ZNF493Q6ZR52 646 aa6.4□□□□□ -1.38
PDLIM5-209ENST00000506632 OR10J6PQ8NGY7 276 aa6.4□□□□□ -1.38
PDLIM5-209ENST00000506632 THAP6Q8TBB0 222 aa6.4□□□□□ -1.38
PDLIM5-209ENST00000506632 RNASE8Q8TDE3 154 aaKnown RBP6.4□□□□□ -1.38
PDLIM5-209ENST00000506632 C16orf74Q96GX8 76 aa6.4□□□□□ -1.38
PDLIM5-209ENST00000506632 FAM167A-AS1Q96KT0 104 aa6.4□□□□□ -1.38
PDLIM5-209ENST00000506632 PARD6GQ9BYG4 376 aaPredicted RBP6.4□□□□□ -1.38
PDLIM5-209ENST00000506632 PPP1R14DQ9NXH3 145 aa6.4□□□□□ -1.38
PDLIM5-209ENST00000506632 M0R3E3 92 aa6.39□□□□□ -1.39
PDLIM5-209ENST00000506632 PYYP10082 97 aa6.39□□□□□ -1.39
PDLIM5-209ENST00000506632 HTN3P15516 51 aa6.39□□□□□ -1.39
PDLIM5-209ENST00000506632 DEFA1P59665 94 aa6.39□□□□□ -1.39
PDLIM5-209ENST00000506632 DEFA3P59666 94 aa6.39□□□□□ -1.39
PDLIM5-209ENST00000506632 CLINT1Q14677 625 aa6.39□□□□□ -1.39
PDLIM5-209ENST00000506632 RNF212Q495C1 297 aa6.39□□□□□ -1.39
PDLIM5-209ENST00000506632 LINC00612Q8N6U2 182 aa6.39□□□□□ -1.39
PDLIM5-209ENST00000506632 TMEM263Q8WUH6 116 aaKnown RBP6.39□□□□□ -1.39
PDLIM5-209ENST00000506632 PPP1R1CQ8WVI7 109 aa6.39□□□□□ -1.39
PDLIM5-209ENST00000506632 SLC25A2Q9BXI2 301 aa6.39□□□□□ -1.39
PDLIM5-209ENST00000506632 WDR61Q9GZS3 305 aaKnown RBP6.39□□□□□ -1.39
PDLIM5-209ENST00000506632 PRELID1Q9Y255 219 aa6.39□□□□□ -1.39
PDLIM5-209ENST00000506632 TIMM8BQ9Y5J9 83 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-209ENST00000506632 DNAH17Q9UFH2 4485 aa6.39□□□□□ -1.39
PDLIM5-209ENST00000506632 NACAE9PAV3 2078 aa6.38□□□□□ -1.39
PDLIM5-209ENST00000506632 CBY3A6NI87 242 aa6.38□□□□□ -1.39
PDLIM5-209ENST00000506632 MPC2O95563 127 aa6.38□□□□□ -1.39
PDLIM5-209ENST00000506632 DEFB130BP0DP73 79 aa6.38□□□□□ -1.39
PDLIM5-209ENST00000506632 DEFB130AP0DP74 79 aa6.38□□□□□ -1.39
PDLIM5-209ENST00000506632 LEPP41159 167 aa6.38□□□□□ -1.39
PDLIM5-209ENST00000506632 FCN2Q15485 313 aa6.38□□□□□ -1.39
PDLIM5-209ENST00000506632 LGALS9BQ3B8N2 356 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms