RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 DNAJC13O75165 2243 aa12.58□□□□□ -0.4
SCLT1-208ENST00000506368 TRBV25-1A0A075B6N4 114 aa12.57□□□□□ -0.4
SCLT1-208ENST00000506368 WI2-2373I1.2A0A1W2PRP0 233 aa12.57□□□□□ -0.4
SCLT1-208ENST00000506368 FCER1GP30273 86 aa12.57□□□□□ -0.4
SCLT1-208ENST00000506368 ODF1Q14990 250 aa12.57□□□□□ -0.4
SCLT1-208ENST00000506368 C10orf55Q5SWW7 151 aa12.57□□□□□ -0.4
SCLT1-208ENST00000506368 LYZL1Q6UWQ5 148 aa12.57□□□□□ -0.4
SCLT1-208ENST00000506368 AMN1Q8IY45 258 aa12.57□□□□□ -0.4
SCLT1-208ENST00000506368 EXOC3-AS1Q8N2X6 119 aa12.57□□□□□ -0.4
SCLT1-208ENST00000506368 SPRY3O43610 288 aa12.57□□□□□ -0.4
SCLT1-208ENST00000506368 SLC25A17O43808 307 aa12.57□□□□□ -0.4
SCLT1-208ENST00000506368 IGHV3-48P01763 117 aa12.57□□□□□ -0.4
SCLT1-208ENST00000506368 RPL27AP46776 148 aaKnown RBP12.57□□□□□ -0.4
SCLT1-208ENST00000506368 SIGLEC15Q6ZMC9 328 aa12.57□□□□□ -0.4
SCLT1-208ENST00000506368 TTC9CQ8N5M4 171 aa12.57□□□□□ -0.4
SCLT1-208ENST00000506368 TNCP24821 2201 aa12.56□□□□□ -0.4
SCLT1-208ENST00000506368 SMG1Q96Q15 3661 aaKnown RBP12.56□□□□□ -0.4
SCLT1-208ENST00000506368 TMEM8BA6NDV4 472 aa12.56□□□□□ -0.4
SCLT1-208ENST00000506368 CRIP1P50238 77 aa12.56□□□□□ -0.4
SCLT1-208ENST00000506368 LYZP61626 148 aa12.56□□□□□ -0.4
SCLT1-208ENST00000506368 GAGE13Q4V321 117 aa12.56□□□□□ -0.4
SCLT1-208ENST00000506368 CCL13Q99616 98 aa12.56□□□□□ -0.4
SCLT1-208ENST00000506368 SPAG8Q99932 426 aaPredicted RBP12.56□□□□□ -0.4
SCLT1-208ENST00000506368 SHANK2-AS3Q9BTD1 123 aa12.56□□□□□ -0.4
SCLT1-208ENST00000506368 MRPL16Q9NX20 251 aaKnown RBP12.56□□□□□ -0.4
SCLT1-208ENST00000506368 NHP2Q9NX24 153 aaKnown RBP12.56□□□□□ -0.4
SCLT1-208ENST00000506368 DKK2Q9UBU2 259 aa12.56□□□□□ -0.4
SCLT1-208ENST00000506368 EPG5Q9HCE0 2579 aa12.56□□□□□ -0.4
SCLT1-208ENST00000506368 CEACAM4O75871 244 aa12.55□□□□□ -0.4
SCLT1-208ENST00000506368 DPM2O94777 84 aa12.55□□□□□ -0.4
SCLT1-208ENST00000506368 TNFAIP6P98066 277 aaPredicted RBP12.55□□□□□ -0.4
SCLT1-208ENST00000506368 ARPC1AQ92747 370 aa12.55□□□□□ -0.4
SCLT1-208ENST00000506368 CLUHP3Q96NS8 147 aa12.55□□□□□ -0.4
SCLT1-208ENST00000506368 VCX2Q9H322 139 aa12.55□□□□□ -0.4
SCLT1-208ENST00000506368 PROCRQ9UNN8 238 aa12.55□□□□□ -0.4
SCLT1-208ENST00000506368 MSMPQ1L6U9 139 aa12.55□□□□□ -0.4
SCLT1-208ENST00000506368 ZNF48Q96MX3 618 aaPredicted RBP12.55□□□□□ -0.4
SCLT1-208ENST00000506368 RASL11BQ9BPW5 248 aa12.55□□□□□ -0.4
SCLT1-208ENST00000506368 SRSF8Q9BRL6 282 aaKnown RBP12.55□□□□□ -0.4
SCLT1-208ENST00000506368 H3BRN7 92 aa12.54□□□□□ -0.4
SCLT1-208ENST00000506368 H3BTX0 84 aa12.54□□□□□ -0.4
SCLT1-208ENST00000506368 GOSR1O95249 250 aa12.54□□□□□ -0.4
SCLT1-208ENST00000506368 WFDC2Q14508 124 aa12.54□□□□□ -0.4
SCLT1-208ENST00000506368 SPRNQ5BIV9 151 aa12.54□□□□□ -0.4
SCLT1-208ENST00000506368 FAM216BQ8N7L0 139 aa12.54□□□□□ -0.4
SCLT1-208ENST00000506368 TPPP3Q9BW30 176 aa12.54□□□□□ -0.4
SCLT1-208ENST00000506368 NPIPB5A8MRT5 1133 aa12.53□□□□□ -0.4
SCLT1-208ENST00000506368 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.53□□□□□ -0.4
SCLT1-208ENST00000506368 DSCAMO60469 2012 aa12.53□□□□□ -0.4
SCLT1-208ENST00000506368 NPYP01303 97 aa12.53□□□□□ -0.4
SCLT1-208ENST00000506368 DUX4L9Q6RFH8 374 aaPredicted RBP12.53□□□□□ -0.4
SCLT1-208ENST00000506368 FDCSPQ8NFU4 85 aa12.53□□□□□ -0.4
SCLT1-208ENST00000506368 AAMDCQ9H7C9 122 aa12.53□□□□□ -0.4
SCLT1-208ENST00000506368 SELENOKQ9Y6D0 94 aa12.53□□□□□ -0.4
SCLT1-208ENST00000506368 PRRC2CQ9Y520 2896 aaKnown RBP12.53□□□□□ -0.4
SCLT1-208ENST00000506368 A0A1B0GWB2 263 aa12.53□□□□□ -0.4
SCLT1-208ENST00000506368 C12orf74Q32Q52 190 aa12.53□□□□□ -0.4
SCLT1-208ENST00000506368 FAM201AQ5SY85 155 aa12.53□□□□□ -0.4
SCLT1-208ENST00000506368 HCP5Q6MZN7 132 aa12.53□□□□□ -0.4
SCLT1-208ENST00000506368 CYSLTR1Q9Y271 337 aa12.53□□□□□ -0.4
SCLT1-208ENST00000506368 CACNA1BQ00975 2339 aa12.52□□□□□ -0.4
SCLT1-208ENST00000506368 TMEM213A2RRL7 107 aa12.52□□□□□ -0.4
SCLT1-208ENST00000506368 RRN3P1Q2M238 152 aa12.52□□□□□ -0.4
SCLT1-208ENST00000506368 MRGPRG-AS1Q2M3A8 158 aa12.52□□□□□ -0.4
SCLT1-208ENST00000506368 TM4SF20Q53R12 229 aa12.52□□□□□ -0.4
SCLT1-208ENST00000506368 C9orf106Q8NAJ2 232 aa12.52□□□□□ -0.4
SCLT1-208ENST00000506368 CNFNQ9BYD5 112 aa12.52□□□□□ -0.4
SCLT1-208ENST00000506368 ZNRD1Q9P1U0 126 aa12.52□□□□□ -0.4
SCLT1-208ENST00000506368 PRSS1P07477 247 aa12.52□□□□□ -0.41
SCLT1-208ENST00000506368 UCNP55089 124 aa12.52□□□□□ -0.41
SCLT1-208ENST00000506368 ZNF418Q8TF45 676 aaPredicted RBP12.52□□□□□ -0.41
SCLT1-208ENST00000506368 PRO0461Q9UI25 63 aa12.52□□□□□ -0.41
SCLT1-208ENST00000506368 RAI1Q7Z5J4 1906 aaPredicted RBP12.51□□□□□ -0.41
SCLT1-208ENST00000506368 IGKV2D-26A0A0A0MRZ7 120 aa12.51□□□□□ -0.41
SCLT1-208ENST00000506368 CRYGBP07316 175 aa12.51□□□□□ -0.41
SCLT1-208ENST00000506368 KLRD1Q13241 179 aa12.51□□□□□ -0.41
SCLT1-208ENST00000506368 ETDBQ3ZM63 59 aa12.51□□□□□ -0.41
SCLT1-208ENST00000506368 DEFB108BQ8NET1 73 aa12.51□□□□□ -0.41
SCLT1-208ENST00000506368 PRORYQ9H606 182 aa12.51□□□□□ -0.41
SCLT1-208ENST00000506368 ATRXP46100 2492 aa12.51□□□□□ -0.41
SCLT1-208ENST00000506368 K7ERJ3 54 aa12.5□□□□□ -0.41
SCLT1-208ENST00000506368 SH2D1AO60880 128 aa12.5□□□□□ -0.41
SCLT1-208ENST00000506368 IGHV1-46P01743 117 aa12.5□□□□□ -0.41
SCLT1-208ENST00000506368 IGLC6P0CF74 106 aa12.5□□□□□ -0.41
SCLT1-208ENST00000506368 LEPP41159 167 aa12.5□□□□□ -0.41
SCLT1-208ENST00000506368 PRR14LQ5THK1 2151 aa12.5□□□□□ -0.41
SCLT1-208ENST00000506368 ZC2HC1BQ5TFG8 222 aa12.5□□□□□ -0.41
SCLT1-208ENST00000506368 TMEM133Q9H2Q1 129 aa12.5□□□□□ -0.41
SCLT1-208ENST00000506368 GEMIN7Q9H840 131 aaKnown RBP12.5□□□□□ -0.41
SCLT1-208ENST00000506368 PRSS47A8MTI9 375 aa12.49□□□□□ -0.41
SCLT1-208ENST00000506368 H3BMG7 143 aa12.49□□□□□ -0.41
SCLT1-208ENST00000506368 MRPS12O15235 138 aaKnown RBP12.49□□□□□ -0.41
SCLT1-208ENST00000506368 RUSC1-AS1Q66K80 236 aa12.49□□□□□ -0.41
SCLT1-208ENST00000506368 C18orf15Q96N68 181 aa12.49□□□□□ -0.41
SCLT1-208ENST00000506368 KALRNO60229 2985 aa12.49□□□□□ -0.41
SCLT1-208ENST00000506368 I3L2K1 104 aa12.49□□□□□ -0.41
SCLT1-208ENST00000506368 M0R1B8 84 aa12.49□□□□□ -0.41
SCLT1-208ENST00000506368 PLNP26678 52 aa12.49□□□□□ -0.41
SCLT1-208ENST00000506368 C1QTNF4Q9BXJ3 329 aa12.49□□□□□ -0.41
SCLT1-208ENST00000506368 NCBP2LA6PVI3 153 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms