RNA–Protein interactions for RNA: ENST00000504881.1

SRFBP1-202, Transcript of serum response factor binding protein 1, humanhuman

TSL 3

Gene SRFBP1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-202ENST00000504881 CALML5Q9NZT1 146 aa0.72□□□□□ -2.29
SRFBP1-202ENST00000504881 COPZ2Q9P299 210 aa0.72□□□□□ -2.29
SRFBP1-202ENST00000504881 SNURFQ9Y675 71 aa0.72□□□□□ -2.29
SRFBP1-202ENST00000504881 PHIPQ8WWQ0 1821 aa0.72□□□□□ -2.29
SRFBP1-202ENST00000504881 ABCA10Q8WWZ4 1543 aa0.72□□□□□ -2.29
SRFBP1-202ENST00000504881 FANCMQ8IYD8 2048 aa0.72□□□□□ -2.29
SRFBP1-202ENST00000504881 POLA1P09884 1462 aaPredicted RBP0.72□□□□□ -2.29
SRFBP1-202ENST00000504881 ARHGEF28Q8N1W1 1705 aaKnown RBP0.72□□□□□ -2.29
SRFBP1-202ENST00000504881 EML6Q6ZMW3 1958 aa0.72□□□□□ -2.29
SRFBP1-202ENST00000504881 DAPK1P53355 1430 aa0.72□□□□□ -2.29
SRFBP1-202ENST00000504881 YTHDC2Q9H6S0 1430 aaKnown RBP0.72□□□□□ -2.29
SRFBP1-202ENST00000504881 CTTNBP2Q8WZ74 1663 aa0.72□□□□□ -2.29
SRFBP1-202ENST00000504881 MYH6P13533 1939 aa0.72□□□□□ -2.29
SRFBP1-202ENST00000504881 ZCCHC11Q5TAX3 1644 aaKnown RBP0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 MED23Q9ULK4 1368 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 PSME4Q14997 1843 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 DNMBPQ6XZF7 1577 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 BICRAQ9NZM4 1560 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 INO80Q9ULG1 1556 aaPredicted RBP0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 CHD3Q12873 2000 aaKnown RBP0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 MAP3K1Q13233 1512 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 UNC13CQ8NB66 2214 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 TRAV3A0A0B4J244 114 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 PRORSD1PA6NEY8 169 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 RIIAD1A6NNX1 92 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 E7EQ34 232 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 TMEM256-PLSCR3K7ERE1 68 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 M0R143 59 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 NDUFB3O43676 98 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 TIMM17BO60830 172 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 HYPMO75409 117 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 APOA2P02652 100 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 DBIP07108 87 aaKnown RBP0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 TRAPPC2P0DI81 140 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 TRAPPC2BP0DI82 140 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 ZNF25P17030 456 aaPredicted RBP0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 CMPK1P30085 196 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 RPL35P42766 123 aaKnown RBP0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 RAB5CP51148 216 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 DNAJB13P59910 316 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 CKS1BP61024 79 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 COPZ1P61923 177 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 PPP3R1P63098 170 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 MYL5Q02045 173 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 DEFB113Q30KQ7 82 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 TMEM128Q5BJH2 165 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 HAGHLQ6PII5 290 aaPredicted RBP0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 SOSTDC1Q6X4U4 206 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 LINC00299Q6ZSB3 139 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 SMIM20Q8N5G0 67 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 ACBD7Q8N6N7 88 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 TSTD1Q8NFU3 115 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 C4orf3Q8WVX3 66 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 S100ZQ8WXG8 99 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 MALSU1Q96EH3 234 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 C14orf144Q96I85 54 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 LYSMD1Q96S90 227 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 GPER1Q99527 375 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 SLC25A21Q9BQT8 299 aaPredicted RBP0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 PBDC1Q9BVG4 233 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 OR2J1Q9GZK6 312 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 Q9H521 79 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 CACYBPQ9HB71 228 aaKnown RBP0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 LRTM1Q9HBL6 345 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 MED11Q9P086 117 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 METTL1Q9UBP6 276 aaKnown RBP0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 SS18L2Q9UHA2 77 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 SCP2D1Q9UJQ7 156 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 UFC1Q9Y3C8 167 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 V9GYS6 101 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 BCORL1Q5H9F3 1711 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 KIAA1551Q9HCM1 1747 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 MED14O60244 1454 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 TCOF1Q13428 1488 aaKnown RBP0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 FYCO1Q9BQS8 1478 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 ARHGAP35Q9NRY4 1499 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 FREM3P0C091 2139 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 HEATR1Q9H583 2144 aaKnown RBP0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 ROS1P08922 2347 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 OVOS2A0A0J9YW53 1432 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 OVOS2Q6IE36 1432 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 NSD3Q9BZ95 1437 aa0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 NCOA6Q14686 2063 aaPredicted RBP0.71□□□□□ -2.3
SRFBP1-202ENST00000504881 ASCC3Q8N3C0 2202 aaKnown RBP0.7□□□□□ -2.3
SRFBP1-202ENST00000504881 N4BP2Q86UW6 1770 aaPredicted RBP0.7□□□□□ -2.3
SRFBP1-202ENST00000504881 PRDM15P57071 1507 aaPredicted RBP0.7□□□□□ -2.3
SRFBP1-202ENST00000504881 TCHHQ07283 1943 aa0.7□□□□□ -2.3
SRFBP1-202ENST00000504881 MYO18AQ92614 2054 aaKnown RBP0.7□□□□□ -2.3
SRFBP1-202ENST00000504881 CDK5RAP2Q96SN8 1893 aa0.7□□□□□ -2.3
SRFBP1-202ENST00000504881 KDM5AP29375 1690 aaKnown RBP0.7□□□□□ -2.3
SRFBP1-202ENST00000504881 GOLGA3Q08378 1498 aa0.7□□□□□ -2.3
SRFBP1-202ENST00000504881 FANCD2Q9BXW9 1451 aa0.7□□□□□ -2.3
SRFBP1-202ENST00000504881 CEP164Q9UPV0 1460 aa0.7□□□□□ -2.3
SRFBP1-202ENST00000504881 TRAV30A0A087WSZ9 112 aa0.7□□□□□ -2.3
SRFBP1-202ENST00000504881 A0A087WX48 190 aa0.7□□□□□ -2.3
SRFBP1-202ENST00000504881 A0A096LPI6 279 aa0.7□□□□□ -2.3
SRFBP1-202ENST00000504881 PNMA8CA0A1B0GUJ8 204 aa0.7□□□□□ -2.3
SRFBP1-202ENST00000504881 TMEM218A2RU14 115 aa0.7□□□□□ -2.3
SRFBP1-202ENST00000504881 TMEM189A5PLL7 270 aa0.7□□□□□ -2.3
SRFBP1-202ENST00000504881 MAP1LC3B2A6NCE7 125 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms