RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 MED6O75586 246 aa4.68□□□□□ -1.66
NPIPB3-203ENST00000504841 AKAIN1P0CW23 69 aa4.68□□□□□ -1.66
NPIPB3-203ENST00000504841 ANXA3P12429 323 aa4.68□□□□□ -1.66
NPIPB3-203ENST00000504841 RPP30P78346 268 aaKnown RBP4.68□□□□□ -1.66
NPIPB3-203ENST00000504841 SRPXP78539 464 aa4.68□□□□□ -1.66
NPIPB3-203ENST00000504841 PRRT1Q99946 306 aa4.68□□□□□ -1.66
NPIPB3-203ENST00000504841 C20orf144Q9BQM9 153 aa4.68□□□□□ -1.66
NPIPB3-203ENST00000504841 LINC00467Q9BRT7 94 aa4.68□□□□□ -1.66
NPIPB3-203ENST00000504841 SLIRPQ9GZT3 109 aaKnown RBP4.68□□□□□ -1.66
NPIPB3-203ENST00000504841 MIXL1Q9H2W2 232 aa4.68□□□□□ -1.66
NPIPB3-203ENST00000504841 GSN-AS1Q9NRJ2 163 aa4.68□□□□□ -1.66
NPIPB3-203ENST00000504841 MSRB1Q9NZV6 116 aa4.68□□□□□ -1.66
NPIPB3-203ENST00000504841 FUT9Q9Y231 359 aa4.68□□□□□ -1.66
NPIPB3-203ENST00000504841 LY96Q9Y6Y9 160 aa4.68□□□□□ -1.66
NPIPB3-203ENST00000504841 TRAV9-2A0A087WT02 112 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 LINC00854A0A1B0GVQ3 168 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 PMS2P5A8MQ11 134 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 PRSS46E5RG02 174 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 PSCAO43653 123 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 PITX3O75364 302 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 TNFSF8P32971 234 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 S100A5P33763 92 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 RRAS2P62070 204 aaPredicted RBP4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 DAZ2Q13117 558 aaKnown RBP4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 WFDC10BQ8IUB3 73 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 SYT8Q8NBV8 401 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 MCFD2Q8NI22 146 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 SMIM4Q8WVI0 70 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 DEDD2Q8WXF8 326 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 SCGB3A2Q96PL1 93 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 CIB3Q96Q77 187 aaPredicted RBP4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 SOSTQ9BQB4 213 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 PYGO2Q9BRQ0 406 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 TMEM70Q9BUB7 260 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 ARL6Q9H0F7 186 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 ARV1Q9H2C2 271 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 ZNF331Q9NQX6 463 aaPredicted RBP4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 MRPL16Q9NX20 251 aaKnown RBP4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 SCP2D1Q9UJQ7 156 aa4.67□□□□□ -1.66
NPIPB3-203ENST00000504841 FABP12A6NFH5 140 aa4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 CCDC160A6NGH7 325 aa4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 SLC17A3O00476 420 aa4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 MRPS12O15235 138 aaKnown RBP4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 SYNGR2O43760 224 aa4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 PRAF2O60831 178 aa4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 CT45A10P0DMU9 189 aa4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 LEPP41159 167 aa4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 SLC38A11Q08AI6 406 aa4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 IL18Q14116 193 aa4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 LYPD5Q6UWN5 251 aa4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 LCN15Q6UWW0 184 aa4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 ZNF680Q8NEM1 530 aa4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 C8orf49Q96NF6 230 aa4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 SLC50A1Q9BRV3 221 aa4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 RBM38Q9H0Z9 239 aaKnown RBP4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 STRAPQ9Y3F4 350 aaKnown RBP4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 KLF12Q9Y4X4 402 aa4.66□□□□□ -1.66
NPIPB3-203ENST00000504841 KRTAP29-1A8MX34 341 aaPredicted RBP4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 E5RGE8 158 aa4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 H3BS24 57 aa4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 ZNF324O75467 553 aaPredicted RBP4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 CCNKO75909 580 aa4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 PLA2G1BP04054 148 aaKnown RBP4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 HOXB5P09067 269 aa4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 CXCL2P19875 107 aa4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 EVI2AP22794 236 aa4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 AP3S2P59780 193 aa4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 ZNF415Q09FC8 603 aa4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 BTN1A1Q13410 526 aa4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 MRPL23Q16540 153 aaKnown RBP4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 S100A7AQ86SG5 101 aa4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 ZBTB8BQ8NAP8 495 aaPredicted RBP4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 C11orf72Q8NBR9 251 aa4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 ZNF431Q8TF32 576 aaPredicted RBP4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 KRTAP4-12Q9BQ66 201 aa4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 FAM30AQ9NZY2 134 aa4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 PRO0255Q9UI72 69 aa4.65□□□□□ -1.67
NPIPB3-203ENST00000504841 MYCBP2O75592 4640 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 PIGBOS1A0A0B4J2F0 54 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 DUXBA0A1W2PPF3 345 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 ANKRD20A5PA0PJZ0 165 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 C7orf71A4D174 169 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 RGS13O14921 159 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 SSSCA1O60232 199 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 COX7A2P2O60397 106 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 CRYGDP07320 174 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 SRIP30626 198 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 FAUP35544 74 aaKnown RBP4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 CRYBA4P53673 196 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 PLP1P60201 277 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 SELENOTP62341 195 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 POLR2GP62487 172 aaKnown RBP eCLIP4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 ERCC8Q13216 396 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 SPANXN2Q5MJ10 180 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 SERTAD4-AS1Q5TG53 156 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 TEPPQ6URK8 271 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 PATE2Q6UY27 113 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 NEGR1Q7Z3B1 354 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 LINC00305Q7Z4B0 112 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 BPIFA4PQ86YQ2 179 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms