RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 IGHV1-69-2A0A0G2JMI3 117 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 BUB1B-PAK6H3BSN5 160 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 SYS1-DBNDD2H3BUS1 97 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 I3L2K1 104 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 M0R3E3 92 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 PRRG2O14669 202 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 CHEK1O14757 476 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 SNAI2O43623 268 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 LEPROTL1O95214 131 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 IGLV1-47P01700 117 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 APOHP02749 345 aaPredicted RBP5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 CRIP1P50238 77 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 TCTAP57738 103 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 FXYD7P58549 80 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 SUMO2P61956 95 aaKnown RBP5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 MPV17L2Q567V2 206 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 ATP5L2Q7Z4Y8 100 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 RNASE8Q8TDE3 154 aaKnown RBP5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 SRSF12Q8WXF0 261 aaKnown RBP5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 RBM14Q96PK6 669 aaKnown RBP5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 CHRDL1Q9BU40 450 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 MRPS16Q9Y3D3 137 aaKnown RBP5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 ABCA4P78363 2273 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 TMSB15BA0A087X1C1 80 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 C20orf202A1L168 122 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 NCR2O95944 276 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 PCP4P48539 62 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 PLGLAQ15195 96 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 FAM71F2Q6NXP2 309 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 GFRALQ6UXV0 394 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 MUC15Q8N387 334 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 C8orf31Q8N9H6 132 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 LINC01560Q8TB33 94 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 C8orf49Q96NF6 230 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 HILPDAQ9Y5L2 63 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 COX11Q9Y6N1 276 aa5.16□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 HELZ2Q9BYK8 2649 aaKnown RBP5.15□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 CNIH1O95406 144 aa5.15□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 LOXL1Q08397 574 aaPredicted RBP5.15□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 MED13LQ71F56 2210 aa5.15□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 C22orf15Q8WYQ4 148 aa5.15□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 RASL11BQ9BPW5 248 aa5.15□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 OTORQ9NRC9 128 aa5.15□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 ZNF492Q9P255 531 aa5.15□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 KAAG1Q9UBP8 84 aa5.15□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 DKK2Q9UBU2 259 aa5.15□□□□□ -1.58
NPHP3-AS1-202ENST00000504440 GCN1Q92616 2671 aaKnown RBP5.15□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 IGHV3OR16-8A0A075B7F1 116 aa5.15□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 LOC389332A0A1B0GUA5 103 aa5.15□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 K7EIM0 57 aa5.15□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 TIMM23O14925 209 aa5.15□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 NUDT3O95989 172 aa5.15□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 IGHV3-23P01764 117 aa5.15□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 SFTPCP11686 197 aa5.15□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 FCGR2BP31994 310 aaPredicted RBP5.15□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 PLP1P60201 277 aa5.15□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 IGFL4Q6B9Z1 124 aa5.15□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 ORAOV1Q8WV07 137 aa5.15□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 TRBV19A0A075B6N1 114 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 LOC105371242A0A075B767 164 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 A0A087X0K7 114 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 PPIAL4CA0A0B4J2A2 164 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 PPIAL4GP0DN37 164 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 HTR1DP28221 377 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 KLRB1Q12918 225 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 KLRD1Q13241 179 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 GLMPQ8WWB7 406 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 NEU4Q8WWR8 484 aaPredicted RBP5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 RPEQ96AT9 228 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 NDFIP1Q9BT67 221 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 NGBQ9NPG2 151 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 ONECUT1Q9UBC0 465 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 SELENOKQ9Y6D0 94 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 NBASA2RRP1 2371 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 TMEM213A2RRL7 107 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 CBY3A6NI87 242 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 CRXO43186 299 aaPredicted RBP5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 IL4P05112 153 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 ARF6P62330 175 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 UBE2V1Q13404 147 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 LY6DQ14210 128 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 SIGLEC15Q6ZMC9 328 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 ZNF491Q8N8L2 437 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 IL17DQ8TAD2 202 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 CHCHD1Q96BP2 118 aaKnown RBP5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 PSG8Q9UQ74 426 aa5.14□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 UBR5O95071 2799 aaPredicted RBP5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 FASNP49327 2511 aaKnown RBP5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 IGHV3-35A0A0C4DH35 117 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 A0A1B0GUT8 65 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 SERTM2A0A1B0GWG4 89 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 IFI27P40305 119 aaPredicted RBP5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 RBPJQ06330 500 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 LCNL1Q6ZST4 164 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 ZNF738Q8NE65 137 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 SMIM12Q96EX1 92 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 SHANK2-AS3Q9BTD1 123 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 GFRA4Q9GZZ7 299 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms