RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 KLF9Q13886 244 aaPredicted RBP2.4□□□□□ -2.03
USP46-205ENST00000504078 GAMTQ14353 236 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 SCGB2B2Q4G0G5 96 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 AARDQ4LEZ3 155 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 C2orf83Q53S99 150 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 NMSQ5H8A3 153 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 SPATA31B1PQ5VZV4 182 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 CST9LP1Q5W188 147 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 TMEM182Q6ZP80 229 aaPredicted RBP2.4□□□□□ -2.03
USP46-205ENST00000504078 Q6ZQT7 251 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 Q6ZSA8 131 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 ACOT7LQ6ZUV0 252 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 PRSS48Q7RTY5 328 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 SAMD12Q8N8I0 201 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 NHLRC2Q8NBF2 726 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 OR4D10Q8NGI6 311 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 OR13C8Q8NGS7 320 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 RNASEH2CQ8TDP1 164 aaKnown RBP2.4□□□□□ -2.03
USP46-205ENST00000504078 LINC00477Q96M19 166 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 RBKSQ9H477 322 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 DUSP21Q9H596 190 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 DNAJC4Q9NNZ3 241 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 DIABLOQ9NR28 239 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 RCL1Q9Y2P8 373 aaKnown RBP2.4□□□□□ -2.03
USP46-205ENST00000504078 KLF12Q9Y4X4 402 aa2.4□□□□□ -2.03
USP46-205ENST00000504078 SMCO3A2RU48 225 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 XKRY2A2RUG3 117 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 INS-IGF2F8WCM5 200 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 H3BRN7 92 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 H7BYZ3 331 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 ADAP1O75689 374 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 IGKV2-30P06310 120 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 CXCL3P19876 107 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 EVI2AP22794 236 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 SRIP30626 198 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 MEOX2P50222 304 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 PPT1P50897 306 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 LSM3P62310 102 aaKnown RBP2.39□□□□□ -2.03
USP46-205ENST00000504078 AKR1C1Q04828 323 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 UBE2NLQ5JXB2 153 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 TMEM268Q5VZI3 342 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 ETFRF1Q6IPR1 90 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 LYPD5Q6UWN5 251 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 DHRS11Q6UWP2 260 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 TMEM256Q8N2U0 113 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 THAP8Q8NA92 274 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 CIRBP-AS1Q8TBR5 109 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 MARCH1Q8TCQ1 289 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 DTD1Q8TEA8 209 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 RPUSD4Q96CM3 377 aaKnown RBP2.39□□□□□ -2.03
USP46-205ENST00000504078 DAZAP1Q96EP5 407 aaKnown RBP2.39□□□□□ -2.03
USP46-205ENST00000504078 SAT2Q96F10 170 aaPredicted RBP2.39□□□□□ -2.03
USP46-205ENST00000504078 TMEM147Q9BVK8 224 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 VCXQ9H320 206 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 COPZ2Q9P299 210 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 TP53TG3Q9ULZ0 132 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 SSR3Q9UNL2 185 aa2.39□□□□□ -2.03
USP46-205ENST00000504078 A0A0A6YYH2 397 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 TRGV4A0A0C4DH28 118 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 IGHV3-16A0A0C4DH30 117 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 TEX13DA0A0J9YY54 714 aaPredicted RBP2.38□□□□□ -2.03
USP46-205ENST00000504078 A6NJ64 397 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 H3BNG1 76 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 GABARAPH6UMI1 98 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 K7EQD1 137 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 L7N2F9 121 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 GABARAPO95166 117 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 TNFAIP8O95379 198 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 CD3DP04234 171 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 OR5G3P0C626 314 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 PRSS3P35030 304 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 CRYBA4P53673 196 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 RAP2BP61225 183 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 RND3P61587 244 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 B2MP61769 119 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 ERCC8Q13216 396 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 NEDD8Q15843 81 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 PSG3Q16557 428 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 LBHQ53QV2 105 aaPredicted RBP2.38□□□□□ -2.03
USP46-205ENST00000504078 RNASE10Q5GAN6 216 aaKnown RBP2.38□□□□□ -2.03
USP46-205ENST00000504078 C1orf194Q5T5A4 169 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 PRR9Q5T870 116 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 LPCAT3Q6P1A2 487 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 ZNF493Q6ZR52 646 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 C9orf47Q6ZRZ4 202 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 SELENOHQ8IZQ5 122 aaKnown RBP2.38□□□□□ -2.03
USP46-205ENST00000504078 LGI3Q8N145 548 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 CCDC71LQ8N9Z2 235 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 C11orf72Q8NBR9 251 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 OCC1Q8TAD7 63 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 LRRC20Q8TCA0 184 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 GPX8Q8TED1 209 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 PCNPQ8WW12 178 aaKnown RBP2.38□□□□□ -2.03
USP46-205ENST00000504078 BAALCQ8WXS3 180 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 RBPMSQ93062 196 aaKnown RBP2.38□□□□□ -2.03
USP46-205ENST00000504078 DNAJC30Q96LL9 226 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 TRGV9Q99603 122 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 C8orf4Q9NR00 106 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 TMEM56-RWDD3S4R434 201 aa2.38□□□□□ -2.03
USP46-205ENST00000504078 TRAV9-2A0A087WT02 112 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms