RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 BAXQ07812 192 aa8.47□□□□□ -1.05
MED28-203ENST00000503945 ASAH1Q13510 395 aa8.47□□□□□ -1.05
MED28-203ENST00000503945 OPCMLQ14982 345 aa8.47□□□□□ -1.05
MED28-203ENST00000503945 FCN2Q15485 313 aa8.47□□□□□ -1.05
MED28-203ENST00000503945 VWC2Q2TAL6 325 aa8.47□□□□□ -1.05
MED28-203ENST00000503945 ZNF493Q6ZR52 646 aa8.47□□□□□ -1.05
MED28-203ENST00000503945 CCDC28AQ8IWP9 274 aa8.47□□□□□ -1.05
MED28-203ENST00000503945 ENKURQ8TC29 256 aa8.47□□□□□ -1.05
MED28-203ENST00000503945 CHAC2Q8WUX2 184 aa8.47□□□□□ -1.05
MED28-203ENST00000503945 C11orf1Q9H5F2 150 aa8.47□□□□□ -1.05
MED28-203ENST00000503945 SLC39A9Q9NUM3 307 aa8.47□□□□□ -1.05
MED28-203ENST00000503945 TIMM8BQ9Y5J9 83 aaPredicted RBP8.47□□□□□ -1.05
MED28-203ENST00000503945 PKD1P98161 4303 aa8.46□□□□□ -1.06
MED28-203ENST00000503945 CBY3A6NI87 242 aa8.46□□□□□ -1.06
MED28-203ENST00000503945 H3BQ15 152 aa8.46□□□□□ -1.06
MED28-203ENST00000503945 H3BTX0 84 aa8.46□□□□□ -1.06
MED28-203ENST00000503945 H7BYZ3 331 aa8.46□□□□□ -1.06
MED28-203ENST00000503945 IGLC2P0DOY2 106 aa8.46□□□□□ -1.06
MED28-203ENST00000503945 PRB4P10163 310 aaPredicted RBP8.46□□□□□ -1.06
MED28-203ENST00000503945 LGALS9BQ3B8N2 356 aa8.46□□□□□ -1.06
MED28-203ENST00000503945 MORN5Q5VZ52 161 aa8.46□□□□□ -1.06
MED28-203ENST00000503945 TMEM88Q6PEY1 159 aa8.46□□□□□ -1.06
MED28-203ENST00000503945 SAT2Q96F10 170 aaPredicted RBP8.46□□□□□ -1.06
MED28-203ENST00000503945 C16orf74Q96GX8 76 aa8.46□□□□□ -1.06
MED28-203ENST00000503945 C20orf144Q9BQM9 153 aa8.46□□□□□ -1.06
MED28-203ENST00000503945 UBE2L5PA0A1B0GUS4 154 aa8.45□□□□□ -1.06
MED28-203ENST00000503945 IGSF23A1L1A6 192 aa8.45□□□□□ -1.06
MED28-203ENST00000503945 PRAC2D3DTV9 90 aa8.45□□□□□ -1.06
MED28-203ENST00000503945 F5H768 121 aa8.45□□□□□ -1.06
MED28-203ENST00000503945 MPDU1O75352 247 aa8.45□□□□□ -1.06
MED28-203ENST00000503945 FGF7P21781 194 aa8.45□□□□□ -1.06
MED28-203ENST00000503945 CYCSP99999 105 aaKnown RBP8.45□□□□□ -1.06
MED28-203ENST00000503945 C15orf53Q8NAA6 179 aa8.45□□□□□ -1.06
MED28-203ENST00000503945 SLC25A31Q9H0C2 315 aa8.45□□□□□ -1.06
MED28-203ENST00000503945 TIMM9Q9Y5J7 89 aa8.45□□□□□ -1.06
MED28-203ENST00000503945 PKHD1P08F94 4074 aa8.44□□□□□ -1.06
MED28-203ENST00000503945 DNAH11Q96DT5 4516 aa8.44□□□□□ -1.06
MED28-203ENST00000503945 E5RGE8 158 aa8.44□□□□□ -1.06
MED28-203ENST00000503945 SLC17A3O00476 420 aa8.44□□□□□ -1.06
MED28-203ENST00000503945 ATP5G1P05496 136 aa8.44□□□□□ -1.06
MED28-203ENST00000503945 ATP5G3P48201 142 aa8.44□□□□□ -1.06
MED28-203ENST00000503945 NHLH2Q02577 135 aa8.44□□□□□ -1.06
MED28-203ENST00000503945 ATG101Q9BSB4 218 aa8.44□□□□□ -1.06
MED28-203ENST00000503945 NMES1Q9C002 83 aa8.44□□□□□ -1.06
MED28-203ENST00000503945 NOP10Q9NPE3 64 aaKnown RBP8.44□□□□□ -1.06
MED28-203ENST00000503945 ZNF586Q9NXT0 402 aa8.44□□□□□ -1.06
MED28-203ENST00000503945 IGLV2-18A0A075B6J9 118 aa8.43□□□□□ -1.06
MED28-203ENST00000503945 PLAC8L1A1L4L8 177 aa8.43□□□□□ -1.06
MED28-203ENST00000503945 INMT-MINDY4F8WBC2 141 aa8.43□□□□□ -1.06
MED28-203ENST00000503945 ZNF253O75346 499 aa8.43□□□□□ -1.06
MED28-203ENST00000503945 UPK1BO75841 260 aa8.43□□□□□ -1.06
MED28-203ENST00000503945 SIX6O95475 246 aa8.43□□□□□ -1.06
MED28-203ENST00000503945 CT45A10P0DMU9 189 aa8.43□□□□□ -1.06
MED28-203ENST00000503945 MED14OSP0DP75 135 aa8.43□□□□□ -1.06
MED28-203ENST00000503945 HIST1H1EP10412 219 aaKnown RBP8.43□□□□□ -1.06
MED28-203ENST00000503945 LEPP41159 167 aa8.43□□□□□ -1.06
MED28-203ENST00000503945 FAM3BP58499 235 aaPredicted RBP8.43□□□□□ -1.06
MED28-203ENST00000503945 SOHLH1Q5JUK2 328 aa8.43□□□□□ -1.06
MED28-203ENST00000503945 TMEM263Q8WUH6 116 aaKnown RBP8.43□□□□□ -1.06
MED28-203ENST00000503945 LINC00477Q96M19 166 aa8.43□□□□□ -1.06
MED28-203ENST00000503945 TMEM14CQ9P0S9 112 aa8.43□□□□□ -1.06
MED28-203ENST00000503945 PRELID1Q9Y255 219 aa8.43□□□□□ -1.06
MED28-203ENST00000503945 TRBV19A0A075B6N1 114 aa8.42□□□□□ -1.06
MED28-203ENST00000503945 TRAV12-3A0A0B4J271 114 aa8.42□□□□□ -1.06
MED28-203ENST00000503945 A6NHS1 94 aa8.42□□□□□ -1.06
MED28-203ENST00000503945 PRSS29PA6NIE9 313 aa8.42□□□□□ -1.06
MED28-203ENST00000503945 J3KRW8 73 aa8.42□□□□□ -1.06
MED28-203ENST00000503945 RTL8CO15255 209 aa8.42□□□□□ -1.06
MED28-203ENST00000503945 PRAF2O60831 178 aa8.42□□□□□ -1.06
MED28-203ENST00000503945 NUDT3O95989 172 aa8.42□□□□□ -1.06
MED28-203ENST00000503945 KIR3DS1Q14943 382 aa8.42□□□□□ -1.06
MED28-203ENST00000503945 OR5C1Q8NGR4 320 aa8.42□□□□□ -1.06
MED28-203ENST00000503945 BLNKQ8WV28 456 aa8.42□□□□□ -1.06
MED28-203ENST00000503945 MRPL53Q96EL3 112 aaKnown RBP8.42□□□□□ -1.06
MED28-203ENST00000503945 NPCDR1Q9BY65 106 aa8.42□□□□□ -1.06
MED28-203ENST00000503945 AAMDCQ9H7C9 122 aa8.42□□□□□ -1.06
MED28-203ENST00000503945 ABCA13Q86UQ4 5058 aa8.42□□□□□ -1.06
MED28-203ENST00000503945 SNURFLB1AK76 121 aa8.41□□□□□ -1.06
MED28-203ENST00000503945 CCL18P55774 89 aa8.41□□□□□ -1.06
MED28-203ENST00000503945 OR5I1Q13606 314 aa8.41□□□□□ -1.06
MED28-203ENST00000503945 PDE6HQ13956 83 aa8.41□□□□□ -1.06
MED28-203ENST00000503945 LRRC37A5PQ49AS3 106 aa8.41□□□□□ -1.06
MED28-203ENST00000503945 GFI1BQ5VTD9 330 aa8.41□□□□□ -1.06
MED28-203ENST00000503945 THAP6Q8TBB0 222 aa8.41□□□□□ -1.06
MED28-203ENST00000503945 RNASE8Q8TDE3 154 aaKnown RBP8.41□□□□□ -1.06
MED28-203ENST00000503945 ODF3Q96PU9 254 aa8.41□□□□□ -1.06
MED28-203ENST00000503945 PARD6GQ9BYG4 376 aaPredicted RBP8.41□□□□□ -1.06
MED28-203ENST00000503945 NPIPB6E9PJ23 425 aa8.4□□□□□ -1.06
MED28-203ENST00000503945 C17orf112F2Z3M2 114 aa8.4□□□□□ -1.06
MED28-203ENST00000503945 SLC25A5P05141 298 aaKnown RBP8.4□□□□□ -1.06
MED28-203ENST00000503945 NBEAP1P0C6P0 100 aa8.4□□□□□ -1.06
MED28-203ENST00000503945 DEFA1P59665 94 aa8.4□□□□□ -1.06
MED28-203ENST00000503945 DEFA3P59666 94 aa8.4□□□□□ -1.06
MED28-203ENST00000503945 PYGO2Q9BRQ0 406 aa8.4□□□□□ -1.06
MED28-203ENST00000503945 OR5AC2Q9NZP5 309 aa8.4□□□□□ -1.06
MED28-203ENST00000503945 SSNA1O43805 119 aa8.39□□□□□ -1.07
MED28-203ENST00000503945 NDUFB4O95168 129 aa8.39□□□□□ -1.07
MED28-203ENST00000503945 GPX1P07203 203 aa8.39□□□□□ -1.07
MED28-203ENST00000503945 PYYP10082 97 aa8.39□□□□□ -1.07
MED28-203ENST00000503945 IFITM3Q01628 133 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms