RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 EIF4E3Q8N5X7 224 aaKnown RBP10.54□□□□□ -0.72
PDLIM7-210ENST00000503827 C15orf40Q8WUR7 153 aa10.54□□□□□ -0.72
PDLIM7-210ENST00000503827 PCNPQ8WW12 178 aaKnown RBP10.54□□□□□ -0.72
PDLIM7-210ENST00000503827 CIB3Q96Q77 187 aaPredicted RBP10.54□□□□□ -0.72
PDLIM7-210ENST00000503827 VGLL1Q99990 258 aa10.54□□□□□ -0.72
PDLIM7-210ENST00000503827 MRPL32Q9BYC8 188 aaKnown RBP10.54□□□□□ -0.72
PDLIM7-210ENST00000503827 LINC00854A0A1B0GVQ3 168 aa10.53□□□□□ -0.72
PDLIM7-210ENST00000503827 K7EQD1 137 aa10.53□□□□□ -0.72
PDLIM7-210ENST00000503827 MRPS12O15235 138 aaKnown RBP10.53□□□□□ -0.72
PDLIM7-210ENST00000503827 SLC25A5P05141 298 aaKnown RBP10.53□□□□□ -0.72
PDLIM7-210ENST00000503827 SRPXP78539 464 aa10.53□□□□□ -0.72
PDLIM7-210ENST00000503827 ZNF415Q09FC8 603 aa10.53□□□□□ -0.72
PDLIM7-210ENST00000503827 EXTL2Q9UBQ6 330 aa10.53□□□□□ -0.72
PDLIM7-210ENST00000503827 PIGBOS1A0A0B4J2F0 54 aa10.52□□□□□ -0.73
PDLIM7-210ENST00000503827 TRGV4A0A0C4DH28 118 aa10.52□□□□□ -0.73
PDLIM7-210ENST00000503827 SMCO3A2RU48 225 aa10.52□□□□□ -0.73
PDLIM7-210ENST00000503827 C7orf71A4D174 169 aa10.52□□□□□ -0.73
PDLIM7-210ENST00000503827 PITX3O75364 302 aa10.52□□□□□ -0.73
PDLIM7-210ENST00000503827 SNRPCP09234 159 aaKnown RBP10.52□□□□□ -0.73
PDLIM7-210ENST00000503827 ANXA3P12429 323 aa10.52□□□□□ -0.73
PDLIM7-210ENST00000503827 SELENOTP62341 195 aa10.52□□□□□ -0.73
PDLIM7-210ENST00000503827 MZT2AQ6P582 158 aa10.52□□□□□ -0.73
PDLIM7-210ENST00000503827 SCXQ7RTU7 201 aa10.52□□□□□ -0.73
PDLIM7-210ENST00000503827 ARL6Q9H0F7 186 aa10.52□□□□□ -0.73
PDLIM7-210ENST00000503827 Q9H521 79 aa10.52□□□□□ -0.73
PDLIM7-210ENST00000503827 Q9HAA7 133 aa10.52□□□□□ -0.73
PDLIM7-210ENST00000503827 MRPL16Q9NX20 251 aaKnown RBP10.52□□□□□ -0.73
PDLIM7-210ENST00000503827 IGHV3-38A0A0C4DH36 116 aa10.51□□□□□ -0.73
PDLIM7-210ENST00000503827 IBA57-AS1B1ANH7 110 aa10.51□□□□□ -0.73
PDLIM7-210ENST00000503827 WRBO00258 174 aa10.51□□□□□ -0.73
PDLIM7-210ENST00000503827 GYPEP15421 78 aa10.51□□□□□ -0.73
PDLIM7-210ENST00000503827 SSBP1Q04837 148 aaKnown RBP10.51□□□□□ -0.73
PDLIM7-210ENST00000503827 SPANXN5Q5MJ07 72 aa10.51□□□□□ -0.73
PDLIM7-210ENST00000503827 IBA57Q5T440 356 aaKnown RBP10.51□□□□□ -0.73
PDLIM7-210ENST00000503827 OR51S1Q8NGJ8 323 aa10.51□□□□□ -0.73
PDLIM7-210ENST00000503827 YIPF6Q96EC8 236 aa10.51□□□□□ -0.73
PDLIM7-210ENST00000503827 PRRT1Q99946 306 aa10.51□□□□□ -0.73
PDLIM7-210ENST00000503827 TXNDC17Q9BRA2 123 aa10.51□□□□□ -0.73
PDLIM7-210ENST00000503827 ARV1Q9H2C2 271 aa10.51□□□□□ -0.73
PDLIM7-210ENST00000503827 RS1O15537 224 aa10.5□□□□□ -0.73
PDLIM7-210ENST00000503827 ORM1P02763 201 aa10.5□□□□□ -0.73
PDLIM7-210ENST00000503827 BPIFA4PQ86YQ2 179 aa10.5□□□□□ -0.73
PDLIM7-210ENST00000503827 SCGB3A2Q96PL1 93 aa10.5□□□□□ -0.73
PDLIM7-210ENST00000503827 PXMP4Q9Y6I8 212 aa10.5□□□□□ -0.73
PDLIM7-210ENST00000503827 DUXBA0A1W2PPF3 345 aa10.49□□□□□ -0.73
PDLIM7-210ENST00000503827 SLC17A3O00476 420 aa10.49□□□□□ -0.73
PDLIM7-210ENST00000503827 SYNGR2O43760 224 aa10.49□□□□□ -0.73
PDLIM7-210ENST00000503827 AKAIN1P0CW23 69 aa10.49□□□□□ -0.73
PDLIM7-210ENST00000503827 PATE2Q6UY27 113 aa10.49□□□□□ -0.73
PDLIM7-210ENST00000503827 STRAPQ9Y3F4 350 aaKnown RBP10.49□□□□□ -0.73
PDLIM7-210ENST00000503827 H3BP45 60 aa10.48□□□□□ -0.73
PDLIM7-210ENST00000503827 H3BTX0 84 aa10.48□□□□□ -0.73
PDLIM7-210ENST00000503827 MPDU1O75352 247 aa10.48□□□□□ -0.73
PDLIM7-210ENST00000503827 NCS1P62166 190 aa10.48□□□□□ -0.73
PDLIM7-210ENST00000503827 BTN1A1Q13410 526 aa10.48□□□□□ -0.73
PDLIM7-210ENST00000503827 C4orf46Q504U0 113 aa10.48□□□□□ -0.73
PDLIM7-210ENST00000503827 LINC01556Q5JQF7 62 aa10.48□□□□□ -0.73
PDLIM7-210ENST00000503827 LINC00305Q7Z4B0 112 aa10.48□□□□□ -0.73
PDLIM7-210ENST00000503827 IQCF2Q8IXL9 164 aa10.48□□□□□ -0.73
PDLIM7-210ENST00000503827 RNF213Q63HN8 5207 aa10.47□□□□□ -0.73
PDLIM7-210ENST00000503827 KLLNB2CW77 178 aa10.47□□□□□ -0.73
PDLIM7-210ENST00000503827 RGS13O14921 159 aa10.47□□□□□ -0.73
PDLIM7-210ENST00000503827 SLC25A6P12236 298 aa10.47□□□□□ -0.73
PDLIM7-210ENST00000503827 MRPS10P82664 201 aaKnown RBP10.47□□□□□ -0.73
PDLIM7-210ENST00000503827 CD300CQ08708 224 aa10.47□□□□□ -0.73
PDLIM7-210ENST00000503827 TDRG1Q3Y452 100 aa10.47□□□□□ -0.73
PDLIM7-210ENST00000503827 PXDC1Q5TGL8 231 aa10.47□□□□□ -0.73
PDLIM7-210ENST00000503827 CLVS1Q8IUQ0 354 aaPredicted RBP10.47□□□□□ -0.73
PDLIM7-210ENST00000503827 BLNKQ8WV28 456 aa10.47□□□□□ -0.73
PDLIM7-210ENST00000503827 AP3S1Q92572 193 aa10.47□□□□□ -0.73
PDLIM7-210ENST00000503827 ARPC5LQ9BPX5 153 aa10.47□□□□□ -0.73
PDLIM7-210ENST00000503827 TM2D2Q9BX73 214 aa10.47□□□□□ -0.73
PDLIM7-210ENST00000503827 BOLA1Q9Y3E2 137 aa10.47□□□□□ -0.73
PDLIM7-210ENST00000503827 C9JCJ5 164 aa10.46□□□□□ -0.73
PDLIM7-210ENST00000503827 RNASE4P34096 147 aaKnown RBP10.46□□□□□ -0.73
PDLIM7-210ENST00000503827 VBP1P61758 197 aa10.46□□□□□ -0.73
PDLIM7-210ENST00000503827 ASAH1Q13510 395 aa10.46□□□□□ -0.73
PDLIM7-210ENST00000503827 SAT2Q96F10 170 aaPredicted RBP10.46□□□□□ -0.73
PDLIM7-210ENST00000503827 CHAC1Q9BUX1 264 aa10.46□□□□□ -0.73
PDLIM7-210ENST00000503827 SCP2D1Q9UJQ7 156 aa10.46□□□□□ -0.73
PDLIM7-210ENST00000503827 TP53TG3Q9ULZ0 132 aa10.46□□□□□ -0.73
PDLIM7-210ENST00000503827 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.45□□□□□ -0.74
PDLIM7-210ENST00000503827 SFTA3P0C7M3 94 aa10.45□□□□□ -0.74
PDLIM7-210ENST00000503827 TNFSF8P32971 234 aa10.45□□□□□ -0.74
PDLIM7-210ENST00000503827 PPT1P50897 306 aa10.45□□□□□ -0.74
PDLIM7-210ENST00000503827 WFDC2Q14508 124 aa10.45□□□□□ -0.74
PDLIM7-210ENST00000503827 MORN5Q5VZ52 161 aa10.45□□□□□ -0.74
PDLIM7-210ENST00000503827 SH2D6Q7Z4S9 175 aa10.45□□□□□ -0.74
PDLIM7-210ENST00000503827 ZNF479Q96JC4 524 aa10.45□□□□□ -0.74
PDLIM7-210ENST00000503827 SLC25A31Q9H0C2 315 aa10.45□□□□□ -0.74
PDLIM7-210ENST00000503827 TRAV8-6A0A0B4J262 113 aa10.44□□□□□ -0.74
PDLIM7-210ENST00000503827 K7EPK0 472 aa10.44□□□□□ -0.74
PDLIM7-210ENST00000503827 GPX1P07203 203 aa10.44□□□□□ -0.74
PDLIM7-210ENST00000503827 OR4E1P0C645 316 aa10.44□□□□□ -0.74
PDLIM7-210ENST00000503827 IGLC2P0DOY2 106 aa10.44□□□□□ -0.74
PDLIM7-210ENST00000503827 TIRAPP58753 221 aa10.44□□□□□ -0.74
PDLIM7-210ENST00000503827 ERCC8Q13216 396 aa10.44□□□□□ -0.74
PDLIM7-210ENST00000503827 ACOT6Q3I5F7 207 aaPredicted RBP10.44□□□□□ -0.74
PDLIM7-210ENST00000503827 LINC01620Q4KN68 170 aa10.44□□□□□ -0.74
PDLIM7-210ENST00000503827 OR10G4Q8NGN3 311 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms