RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 OXA1LQ15070 435 aa12.99□□□□□ -0.33
RNF4-204ENST00000503659 GUK1Q16774 197 aa12.99□□□□□ -0.33
RNF4-204ENST00000503659 GCSAMLQ5JQS6 135 aa12.99□□□□□ -0.33
RNF4-204ENST00000503659 PPP1R1CQ8WVI7 109 aa12.99□□□□□ -0.33
RNF4-204ENST00000503659 SLC25A31Q9H0C2 315 aa12.99□□□□□ -0.33
RNF4-204ENST00000503659 PLAC8L1A1L4L8 177 aa12.98□□□□□ -0.33
RNF4-204ENST00000503659 CLINT1Q14677 625 aa12.98□□□□□ -0.33
RNF4-204ENST00000503659 NDUFAF3Q9BU61 184 aa12.98□□□□□ -0.33
RNF4-204ENST00000503659 PARD6GQ9BYG4 376 aaPredicted RBP12.98□□□□□ -0.33
RNF4-204ENST00000503659 PPP1R14DQ9NXH3 145 aa12.98□□□□□ -0.33
RNF4-204ENST00000503659 ZNF253O75346 499 aa12.97□□□□□ -0.33
RNF4-204ENST00000503659 AZU1P20160 251 aa12.97□□□□□ -0.33
RNF4-204ENST00000503659 TSPOP30536 169 aa12.97□□□□□ -0.33
RNF4-204ENST00000503659 CDKN1BP46527 198 aa12.97□□□□□ -0.33
RNF4-204ENST00000503659 KIR3DS1Q14943 382 aa12.97□□□□□ -0.33
RNF4-204ENST00000503659 TMEM14CQ9P0S9 112 aa12.97□□□□□ -0.33
RNF4-204ENST00000503659 TRBV19A0A075B6N1 114 aa12.96□□□□□ -0.33
RNF4-204ENST00000503659 SSNA1O43805 119 aa12.96□□□□□ -0.33
RNF4-204ENST00000503659 PYYP10082 97 aa12.96□□□□□ -0.33
RNF4-204ENST00000503659 TMEM256Q8N2U0 113 aa12.96□□□□□ -0.33
RNF4-204ENST00000503659 OR10J6PQ8NGY7 276 aa12.96□□□□□ -0.33
RNF4-204ENST00000503659 WDR61Q9GZS3 305 aaKnown RBP12.96□□□□□ -0.33
RNF4-204ENST00000503659 NDUFB4O95168 129 aa12.95□□□□□ -0.34
RNF4-204ENST00000503659 MPC2O95563 127 aa12.95□□□□□ -0.34
RNF4-204ENST00000503659 P0DMU3 169 aa12.95□□□□□ -0.34
RNF4-204ENST00000503659 FAM231AP0DMU4 169 aa12.95□□□□□ -0.34
RNF4-204ENST00000503659 FAM231CP0DMU5 169 aa12.95□□□□□ -0.34
RNF4-204ENST00000503659 DAD1P61803 113 aa12.95□□□□□ -0.34
RNF4-204ENST00000503659 FAM210BQ96KR6 192 aa12.95□□□□□ -0.34
RNF4-204ENST00000503659 LINC01587Q99440 93 aa12.95□□□□□ -0.34
RNF4-204ENST00000503659 SLC25A2Q9BXI2 301 aa12.95□□□□□ -0.34
RNF4-204ENST00000503659 NPIPB6E9PJ23 425 aa12.94□□□□□ -0.34
RNF4-204ENST00000503659 M0R3E3 92 aa12.94□□□□□ -0.34
RNF4-204ENST00000503659 HIST1H1EP10412 219 aaKnown RBP12.94□□□□□ -0.34
RNF4-204ENST00000503659 HTN3P15516 51 aa12.94□□□□□ -0.34
RNF4-204ENST00000503659 TAS2R60P59551 318 aa12.94□□□□□ -0.34
RNF4-204ENST00000503659 GFI1BQ5VTD9 330 aa12.94□□□□□ -0.34
RNF4-204ENST00000503659 MIR17HGQ75NE6 70 aa12.94□□□□□ -0.34
RNF4-204ENST00000503659 FAM167A-AS1Q96KT0 104 aa12.94□□□□□ -0.34
RNF4-204ENST00000503659 DNAH2Q9P225 4427 aa12.93□□□□□ -0.34
RNF4-204ENST00000503659 LYRM9A8MSI8 78 aa12.93□□□□□ -0.34
RNF4-204ENST00000503659 CT45A10P0DMU9 189 aa12.93□□□□□ -0.34
RNF4-204ENST00000503659 MRPL53Q96EL3 112 aaKnown RBP12.93□□□□□ -0.34
RNF4-204ENST00000503659 ATP5SQ99766 215 aa12.93□□□□□ -0.34
RNF4-204ENST00000503659 HSPB11Q9Y547 144 aa12.93□□□□□ -0.34
RNF4-204ENST00000503659 PET100P0DJ07 73 aa12.92□□□□□ -0.34
RNF4-204ENST00000503659 PDE6HQ13956 83 aa12.92□□□□□ -0.34
RNF4-204ENST00000503659 POM121L12Q8N7R1 296 aa12.92□□□□□ -0.34
RNF4-204ENST00000503659 RNASE8Q8TDE3 154 aaKnown RBP12.92□□□□□ -0.34
RNF4-204ENST00000503659 ODF3Q96PU9 254 aa12.92□□□□□ -0.34
RNF4-204ENST00000503659 C20orf144Q9BQM9 153 aa12.92□□□□□ -0.34
RNF4-204ENST00000503659 MBD2Q9UBB5 411 aa12.92□□□□□ -0.34
RNF4-204ENST00000503659 HECTD4Q9Y4D8 3996 aa12.91□□□□□ -0.34
RNF4-204ENST00000503659 H7BYZ3 331 aa12.91□□□□□ -0.34
RNF4-204ENST00000503659 HTN1P15515 57 aa12.91□□□□□ -0.34
RNF4-204ENST00000503659 FCN2Q15485 313 aa12.91□□□□□ -0.34
RNF4-204ENST00000503659 TMEM88Q6PEY1 159 aa12.91□□□□□ -0.34
RNF4-204ENST00000503659 BLNKQ8WV28 456 aa12.91□□□□□ -0.34
RNF4-204ENST00000503659 C16orf74Q96GX8 76 aa12.91□□□□□ -0.34
RNF4-204ENST00000503659 KCNIP2Q9NS61 270 aa12.91□□□□□ -0.34
RNF4-204ENST00000503659 FAT2Q9NYQ8 4349 aa12.91□□□□□ -0.34
RNF4-204ENST00000503659 DEFB130BP0DP73 79 aa12.9□□□□□ -0.34
RNF4-204ENST00000503659 DEFB130AP0DP74 79 aa12.9□□□□□ -0.34
RNF4-204ENST00000503659 LINC00336Q6ZUF6 198 aa12.9□□□□□ -0.34
RNF4-204ENST00000503659 EXOC3-AS1Q8N2X6 119 aa12.9□□□□□ -0.34
RNF4-204ENST00000503659 TMEM263Q8WUH6 116 aaKnown RBP12.9□□□□□ -0.34
RNF4-204ENST00000503659 MRPL32Q9BYC8 188 aaKnown RBP12.9□□□□□ -0.34
RNF4-204ENST00000503659 TIMM9Q9Y5J7 89 aa12.9□□□□□ -0.34
RNF4-204ENST00000503659 ALG5Q9Y673 324 aa12.9□□□□□ -0.34
RNF4-204ENST00000503659 J3KRW8 73 aa12.89□□□□□ -0.35
RNF4-204ENST00000503659 RPL12P30050 165 aaKnown RBP12.89□□□□□ -0.35
RNF4-204ENST00000503659 LEPP41159 167 aa12.89□□□□□ -0.35
RNF4-204ENST00000503659 ERCC8Q13216 396 aa12.89□□□□□ -0.35
RNF4-204ENST00000503659 FXYD5Q96DB9 178 aa12.89□□□□□ -0.35
RNF4-204ENST00000503659 SMIM3Q9BZL3 60 aa12.89□□□□□ -0.35
RNF4-204ENST00000503659 FUT9Q9Y231 359 aa12.89□□□□□ -0.35
RNF4-204ENST00000503659 PRELID1Q9Y255 219 aa12.89□□□□□ -0.35
RNF4-204ENST00000503659 NACAE9PAV3 2078 aa12.89□□□□□ -0.35
RNF4-204ENST00000503659 C17orf112F2Z3M2 114 aa12.88□□□□□ -0.35
RNF4-204ENST00000503659 ZNF493Q6ZR52 646 aa12.88□□□□□ -0.35
RNF4-204ENST00000503659 FAM19A4Q96LR4 140 aa12.88□□□□□ -0.35
RNF4-204ENST00000503659 OR51M1Q9H341 326 aa12.88□□□□□ -0.35
RNF4-204ENST00000503659 TRAV12-3A0A0B4J271 114 aa12.87□□□□□ -0.35
RNF4-204ENST00000503659 PTTG1O95997 202 aa12.87□□□□□ -0.35
RNF4-204ENST00000503659 OR10J4P0C629 311 aa12.87□□□□□ -0.35
RNF4-204ENST00000503659 ICAM4Q14773 271 aa12.87□□□□□ -0.35
RNF4-204ENST00000503659 ZNF503Q96F45 646 aa12.87□□□□□ -0.35
RNF4-204ENST00000503659 PAXXQ9BUH6 204 aa12.87□□□□□ -0.35
RNF4-204ENST00000503659 AGPAT4-IT1Q9H0P7 198 aa12.87□□□□□ -0.35
RNF4-204ENST00000503659 WFDC1Q9HC57 220 aa12.87□□□□□ -0.35
RNF4-204ENST00000503659 TIMM8BQ9Y5J9 83 aaPredicted RBP12.87□□□□□ -0.35
RNF4-204ENST00000503659 IGKV2-40A0A087WW87 121 aaPredicted RBP12.86□□□□□ -0.35
RNF4-204ENST00000503659 IGKV2D-40P01614 121 aaPredicted RBP12.86□□□□□ -0.35
RNF4-204ENST00000503659 NBEAP1P0C6P0 100 aa12.86□□□□□ -0.35
RNF4-204ENST00000503659 FFAR4Q5NUL3 377 aa12.86□□□□□ -0.35
RNF4-204ENST00000503659 FAM122CQ6P4D5 195 aa12.86□□□□□ -0.35
RNF4-204ENST00000503659 PHYHIPLQ96FC7 376 aa12.86□□□□□ -0.35
RNF4-204ENST00000503659 AAMDCQ9H7C9 122 aa12.86□□□□□ -0.35
RNF4-204ENST00000503659 NOP10Q9NPE3 64 aaKnown RBP12.86□□□□□ -0.35
RNF4-204ENST00000503659 DNAH17Q9UFH2 4485 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms