RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 GPHB5Q86YW7 130 aa16.84■□□□□ 0.29
PTPN13-205ENST00000502971 SMIM27A0A1W2PRY6 76 aa16.84■□□□□ 0.29
PTPN13-205ENST00000502971 LY6G6DO95868 133 aa16.84■□□□□ 0.29
PTPN13-205ENST00000502971 RPLP1P05386 114 aaKnown RBP16.84■□□□□ 0.29
PTPN13-205ENST00000502971 FAM106AQ4KMX7 169 aa16.84■□□□□ 0.29
PTPN13-205ENST00000502971 K7EMT4 169 aa16.83■□□□□ 0.28
PTPN13-205ENST00000502971 CHEK1O14757 476 aa16.83■□□□□ 0.28
PTPN13-205ENST00000502971 PHOX2AO14813 284 aa16.83■□□□□ 0.28
PTPN13-205ENST00000502971 RPL19P84098 196 aaKnown RBP16.83■□□□□ 0.28
PTPN13-205ENST00000502971 C19orf71A6NCJ1 209 aa16.82■□□□□ 0.28
PTPN13-205ENST00000502971 UBE2E2Q96LR5 201 aa16.82■□□□□ 0.28
PTPN13-205ENST00000502971 CLEC5AQ9NY25 188 aa16.82■□□□□ 0.28
PTPN13-205ENST00000502971 DNAJC9-AS1A6NH13 148 aa16.82■□□□□ 0.28
PTPN13-205ENST00000502971 LCN12Q6JVE5 192 aa16.82■□□□□ 0.28
PTPN13-205ENST00000502971 MRPL53Q96EL3 112 aaKnown RBP16.82■□□□□ 0.28
PTPN13-205ENST00000502971 DAZAP1Q96EP5 407 aaKnown RBP16.82■□□□□ 0.28
PTPN13-205ENST00000502971 SMR3AQ99954 134 aa16.82■□□□□ 0.28
PTPN13-205ENST00000502971 SAV1Q9H4B6 383 aaPredicted RBP16.82■□□□□ 0.28
PTPN13-205ENST00000502971 DAZ1Q9NQZ3 744 aaKnown RBP16.82■□□□□ 0.28
PTPN13-205ENST00000502971 C5orf52A6NGY3 159 aa16.81■□□□□ 0.28
PTPN13-205ENST00000502971 LGALS1P09382 135 aaKnown RBP16.81■□□□□ 0.28
PTPN13-205ENST00000502971 CT83Q5H943 113 aa16.81■□□□□ 0.28
PTPN13-205ENST00000502971 ACTL10Q5JWF8 245 aa16.81■□□□□ 0.28
PTPN13-205ENST00000502971 FRZBQ92765 325 aa16.81■□□□□ 0.28
PTPN13-205ENST00000502971 IGHV7-4-1A0A0J9YVY3 117 aa16.8■□□□□ 0.28
PTPN13-205ENST00000502971 HIST1H2BKO60814 126 aa16.8■□□□□ 0.28
PTPN13-205ENST00000502971 HIST1H2BJP06899 126 aa16.8■□□□□ 0.28
PTPN13-205ENST00000502971 HIST1H2BOP23527 126 aa16.8■□□□□ 0.28
PTPN13-205ENST00000502971 HIST1H2BBP33778 126 aa16.8■□□□□ 0.28
PTPN13-205ENST00000502971 HIST1H2BDP58876 126 aa16.8■□□□□ 0.28
PTPN13-205ENST00000502971 SNRPEP62304 92 aaKnown RBP16.8■□□□□ 0.28
PTPN13-205ENST00000502971 HIST1H2BCP62807 126 aa16.8■□□□□ 0.28
PTPN13-205ENST00000502971 HIST2H2BEQ16778 126 aa16.8■□□□□ 0.28
PTPN13-205ENST00000502971 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.8■□□□□ 0.28
PTPN13-205ENST00000502971 IGFL4Q6B9Z1 124 aa16.8■□□□□ 0.28
PTPN13-205ENST00000502971 LINC00322Q6ZN03 302 aaPredicted RBP16.8■□□□□ 0.28
PTPN13-205ENST00000502971 C8orf86Q6ZUL3 223 aa16.8■□□□□ 0.28
PTPN13-205ENST00000502971 GBGT1Q8N5D6 347 aa16.8■□□□□ 0.28
PTPN13-205ENST00000502971 HIST1H2BHQ93079 126 aa16.8■□□□□ 0.28
PTPN13-205ENST00000502971 HIST1H2BNQ99877 126 aa16.8■□□□□ 0.28
PTPN13-205ENST00000502971 HIST1H2BMQ99879 126 aa16.8■□□□□ 0.28
PTPN13-205ENST00000502971 HIVEP2P31629 2446 aa16.8■□□□□ 0.28
PTPN13-205ENST00000502971 P01737 135 aa16.79■□□□□ 0.28
PTPN13-205ENST00000502971 TRGC1P0CF51 173 aa16.79■□□□□ 0.28
PTPN13-205ENST00000502971 HLA-DMBP28068 263 aa16.79■□□□□ 0.28
PTPN13-205ENST00000502971 TSKUQ8WUA8 353 aa16.79■□□□□ 0.28
PTPN13-205ENST00000502971 RPP21Q9H633 154 aaKnown RBP16.79■□□□□ 0.28
PTPN13-205ENST00000502971 UFC1Q9Y3C8 167 aa16.79■□□□□ 0.28
PTPN13-205ENST00000502971 IGKV2-40A0A087WW87 121 aaPredicted RBP16.79■□□□□ 0.28
PTPN13-205ENST00000502971 RBAKDNA6NC62 111 aa16.79■□□□□ 0.28
PTPN13-205ENST00000502971 IGKV2D-40P01614 121 aaPredicted RBP16.79■□□□□ 0.28
PTPN13-205ENST00000502971 SAPCD1Q5SSQ6 148 aa16.79■□□□□ 0.28
PTPN13-205ENST00000502971 SONP18583 2426 aaKnown RBP16.78■□□□□ 0.28
PTPN13-205ENST00000502971 HIVEP1P15822 2718 aa16.78■□□□□ 0.28
PTPN13-205ENST00000502971 TRAV8-2A0A0B4J237 113 aa16.78■□□□□ 0.28
PTPN13-205ENST00000502971 IZUMO1RA6ND01 250 aa16.78■□□□□ 0.28
PTPN13-205ENST00000502971 OR4B1Q8NGF8 309 aa16.78■□□□□ 0.28
PTPN13-205ENST00000502971 ZC2HC1AQ96GY0 325 aa16.78■□□□□ 0.28
PTPN13-205ENST00000502971 TRAPPC1Q9Y5R8 145 aa16.78■□□□□ 0.28
PTPN13-205ENST00000502971 FAM181BA6NEQ2 426 aa16.77■□□□□ 0.28
PTPN13-205ENST00000502971 ZNF705FA8MVS1 300 aaPredicted RBP16.77■□□□□ 0.28
PTPN13-205ENST00000502971 NPIPB6E9PJ23 425 aa16.77■□□□□ 0.28
PTPN13-205ENST00000502971 CA1P00915 261 aaPredicted RBP16.77■□□□□ 0.28
PTPN13-205ENST00000502971 TCL1AP56279 114 aa16.77■□□□□ 0.28
PTPN13-205ENST00000502971 COX19Q49B96 90 aa16.77■□□□□ 0.28
PTPN13-205ENST00000502971 TM4SF20Q53R12 229 aa16.77■□□□□ 0.28
PTPN13-205ENST00000502971 COX8CQ7Z4L0 72 aa16.77■□□□□ 0.28
PTPN13-205ENST00000502971 KLHDC1Q8N7A1 406 aa16.77■□□□□ 0.28
PTPN13-205ENST00000502971 RHPN1-AS1Q9BWJ2 59 aa16.77■□□□□ 0.28
PTPN13-205ENST00000502971 NAT8BQ9UHF3 227 aa16.77■□□□□ 0.28
PTPN13-205ENST00000502971 SMPXQ9UHP9 88 aa16.77■□□□□ 0.28
PTPN13-205ENST00000502971 MXRA5Q9NR99 2828 aa16.77■□□□□ 0.28
PTPN13-205ENST00000502971 A8MWL6 223 aa16.76■□□□□ 0.27
PTPN13-205ENST00000502971 UBE2CO00762 179 aa16.76■□□□□ 0.27
PTPN13-205ENST00000502971 BMI1P35226 326 aa16.76■□□□□ 0.27
PTPN13-205ENST00000502971 FABP9Q0Z7S8 132 aa16.76■□□□□ 0.27
PTPN13-205ENST00000502971 Q6ZSV7 163 aa16.76■□□□□ 0.27
PTPN13-205ENST00000502971 RNF182Q8N6D2 247 aa16.76■□□□□ 0.27
PTPN13-205ENST00000502971 C16orf92Q96LL3 132 aa16.76■□□□□ 0.27
PTPN13-205ENST00000502971 CT45A10P0DMU9 189 aa16.75■□□□□ 0.27
PTPN13-205ENST00000502971 PRB4P10163 310 aaPredicted RBP16.75■□□□□ 0.27
PTPN13-205ENST00000502971 NDUFA6P56556 154 aa16.75■□□□□ 0.27
PTPN13-205ENST00000502971 REC114Q7Z4M0 266 aa16.75■□□□□ 0.27
PTPN13-205ENST00000502971 PRR25Q96S07 402 aa16.75■□□□□ 0.27
PTPN13-205ENST00000502971 VGLL1Q99990 258 aa16.75■□□□□ 0.27
PTPN13-205ENST00000502971 GFRA4Q9GZZ7 299 aa16.75■□□□□ 0.27
PTPN13-205ENST00000502971 ESM1Q9NQ30 184 aa16.75■□□□□ 0.27
PTPN13-205ENST00000502971 SRD5A1P18405 259 aa16.74■□□□□ 0.27
PTPN13-205ENST00000502971 LGALS9O00182 355 aa16.73■□□□□ 0.27
PTPN13-205ENST00000502971 WDR73Q6P4I2 378 aa16.73■□□□□ 0.27
PTPN13-205ENST00000502971 Q71RC1 249 aaPredicted RBP16.73■□□□□ 0.27
PTPN13-205ENST00000502971 C8orf49Q96NF6 230 aa16.73■□□□□ 0.27
PTPN13-205ENST00000502971 NEU1Q99519 415 aa16.73■□□□□ 0.27
PTPN13-205ENST00000502971 GNB1LQ9BYB4 327 aa16.73■□□□□ 0.27
PTPN13-205ENST00000502971 FAM231BA6NCW3 169 aa16.73■□□□□ 0.27
PTPN13-205ENST00000502971 PRAC2D3DTV9 90 aa16.73■□□□□ 0.27
PTPN13-205ENST00000502971 RASL11AQ6T310 242 aa16.73■□□□□ 0.27
PTPN13-205ENST00000502971 NUP35Q8NFH5 326 aa16.73■□□□□ 0.27
PTPN13-205ENST00000502971 NDFIP1Q9BT67 221 aa16.73■□□□□ 0.27
PTPN13-205ENST00000502971 NRN1Q9NPD7 142 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms