RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 IGKV3-20P01619 116 aa18.31■□□□□ 0.52
LSM6-202ENST00000502781 STAG3L2P0CL84 134 aa18.31■□□□□ 0.52
LSM6-202ENST00000502781 STAG3L3P0CL85 134 aa18.31■□□□□ 0.52
LSM6-202ENST00000502781 UBE2L3P68036 154 aaKnown RBP18.31■□□□□ 0.52
LSM6-202ENST00000502781 LGALSLQ3ZCW2 172 aaPredicted RBP18.31■□□□□ 0.52
LSM6-202ENST00000502781 RAB24Q969Q5 203 aa18.31■□□□□ 0.52
LSM6-202ENST00000502781 PRAC2D3DTV9 90 aa18.3■□□□□ 0.52
LSM6-202ENST00000502781 ZNF705DP0CH99 300 aaPredicted RBP18.3■□□□□ 0.52
LSM6-202ENST00000502781 ZNF705BP0CI00 300 aaPredicted RBP18.3■□□□□ 0.52
LSM6-202ENST00000502781 PHYHIPLQ96FC7 376 aa18.3■□□□□ 0.52
LSM6-202ENST00000502781 C1QTNF4Q9BXJ3 329 aa18.3■□□□□ 0.52
LSM6-202ENST00000502781 EDA2RQ9HAV5 297 aa18.3■□□□□ 0.52
LSM6-202ENST00000502781 PRELID1Q9Y255 219 aa18.3■□□□□ 0.52
LSM6-202ENST00000502781 WWC2-AS2Q96NR7 200 aa18.3■□□□□ 0.52
LSM6-202ENST00000502781 ZNF471Q9BX82 626 aaPredicted RBP18.3■□□□□ 0.52
LSM6-202ENST00000502781 SLC35B3Q9H1N7 401 aa18.3■□□□□ 0.52
LSM6-202ENST00000502781 M0R3E3 92 aa18.29■□□□□ 0.52
LSM6-202ENST00000502781 LYPD1Q8N2G4 141 aa18.29■□□□□ 0.52
LSM6-202ENST00000502781 EXOC3-AS1Q8N2X6 119 aa18.29■□□□□ 0.52
LSM6-202ENST00000502781 ACTR3CQ9C0K3 210 aaPredicted RBP18.29■□□□□ 0.52
LSM6-202ENST00000502781 AAMDCQ9H7C9 122 aa18.29■□□□□ 0.52
LSM6-202ENST00000502781 HMGB3O15347 200 aaKnown RBP18.28■□□□□ 0.52
LSM6-202ENST00000502781 PFDN1O60925 122 aa18.28■□□□□ 0.52
LSM6-202ENST00000502781 SEC11BP0C7V7 166 aa18.28■□□□□ 0.52
LSM6-202ENST00000502781 PRB4P10163 310 aaPredicted RBP18.28■□□□□ 0.52
LSM6-202ENST00000502781 HIST1H1AQ02539 215 aaPredicted RBP18.28■□□□□ 0.52
LSM6-202ENST00000502781 ZNF726P1Q15940 193 aa18.28■□□□□ 0.52
LSM6-202ENST00000502781 SSX7Q7RTT5 188 aa18.28■□□□□ 0.52
LSM6-202ENST00000502781 XCL2Q9UBD3 114 aa18.28■□□□□ 0.52
LSM6-202ENST00000502781 ARL14EPLP0DKL9 152 aa18.27■□□□□ 0.51
LSM6-202ENST00000502781 ICAM4Q14773 271 aa18.27■□□□□ 0.51
LSM6-202ENST00000502781 AKR1C8PQ5T2L2 129 aa18.27■□□□□ 0.51
LSM6-202ENST00000502781 STOML3Q8TAV4 291 aa18.27■□□□□ 0.51
LSM6-202ENST00000502781 SUN5Q8TC36 379 aa18.27■□□□□ 0.51
LSM6-202ENST00000502781 RARRES2Q99969 163 aa18.27■□□□□ 0.51
LSM6-202ENST00000502781 EIF5AP63241 154 aaKnown RBP18.26■□□□□ 0.51
LSM6-202ENST00000502781 BAP18Q8IXM2 172 aa18.26■□□□□ 0.51
LSM6-202ENST00000502781 PLA2G2EQ9NZK7 142 aa18.26■□□□□ 0.51
LSM6-202ENST00000502781 CTXND1A0A1B0GTU2 59 aa18.25■□□□□ 0.51
LSM6-202ENST00000502781 ZNF705EA8MWA4 302 aaPredicted RBP18.25■□□□□ 0.51
LSM6-202ENST00000502781 RANP62826 216 aaKnown RBP18.25■□□□□ 0.51
LSM6-202ENST00000502781 OR11H2Q8NH07 326 aa18.25■□□□□ 0.51
LSM6-202ENST00000502781 Q9H3A6 140 aa18.25■□□□□ 0.51
LSM6-202ENST00000502781 FXYD7P58549 80 aa18.24■□□□□ 0.51
LSM6-202ENST00000502781 OR10J6PQ8NGY7 276 aa18.24■□□□□ 0.51
LSM6-202ENST00000502781 NPIPB6E9PJ23 425 aa18.23■□□□□ 0.51
LSM6-202ENST00000502781 TPT1P13693 172 aaKnown RBP18.23■□□□□ 0.51
LSM6-202ENST00000502781 GCHFRP30047 84 aa18.23■□□□□ 0.51
LSM6-202ENST00000502781 X6R8D5 127 aa18.23■□□□□ 0.51
LSM6-202ENST00000502781 BOLA2-SMG1P6H3BVE0 249 aa18.22■□□□□ 0.51
LSM6-202ENST00000502781 CXorf1O96002 111 aa18.22■□□□□ 0.51
LSM6-202ENST00000502781 AMBPP02760 352 aa18.22■□□□□ 0.51
LSM6-202ENST00000502781 ZNF705AQ6ZN79 300 aaPredicted RBP18.22■□□□□ 0.51
LSM6-202ENST00000502781 C9orf62Q8N4C0 152 aa18.22■□□□□ 0.51
LSM6-202ENST00000502781 UMAD1C9J7I0 102 aa18.21■□□□□ 0.51
LSM6-202ENST00000502781 M0R2Z0 102 aa18.21■□□□□ 0.51
LSM6-202ENST00000502781 CRXO43186 299 aaPredicted RBP18.21■□□□□ 0.51
LSM6-202ENST00000502781 SPINK13Q1W4C9 94 aa18.21■□□□□ 0.51
LSM6-202ENST00000502781 ZFP69Q49AA0 526 aa18.21■□□□□ 0.51
LSM6-202ENST00000502781 IGF2BP2-AS1Q96M15 143 aa18.21■□□□□ 0.51
LSM6-202ENST00000502781 OTORQ9NRC9 128 aa18.21■□□□□ 0.51
LSM6-202ENST00000502781 ODF3Q96PU9 254 aa18.2■□□□□ 0.5
LSM6-202ENST00000502781 TMEM167BQ9NRX6 74 aa18.2■□□□□ 0.5
LSM6-202ENST00000502781 C9orf47Q6ZRZ4 202 aa18.19■□□□□ 0.5
LSM6-202ENST00000502781 C1orf158Q8N1D5 194 aa18.19■□□□□ 0.5
LSM6-202ENST00000502781 A0A0J9YWU9 116 aa18.18■□□□□ 0.5
LSM6-202ENST00000502781 CT45A10P0DMU9 189 aa18.18■□□□□ 0.5
LSM6-202ENST00000502781 FHITP49789 147 aa18.18■□□□□ 0.5
LSM6-202ENST00000502781 SLC51BQ86UW2 128 aa18.18■□□□□ 0.5
LSM6-202ENST00000502781 ARL6IP6Q8N6S5 226 aa18.18■□□□□ 0.5
LSM6-202ENST00000502781 Q8NAQ8 132 aa18.18■□□□□ 0.5
LSM6-202ENST00000502781 TMED6Q8WW62 240 aa18.18■□□□□ 0.5
LSM6-202ENST00000502781 NEU1Q99519 415 aa18.18■□□□□ 0.5
LSM6-202ENST00000502781 AGPAT4-IT1Q9H0P7 198 aa18.18■□□□□ 0.5
LSM6-202ENST00000502781 CDKN1BP46527 198 aa18.17■□□□□ 0.5
LSM6-202ENST00000502781 RXFP4Q8TDU9 374 aa18.17■□□□□ 0.5
LSM6-202ENST00000502781 LINC00477Q96M19 166 aa18.17■□□□□ 0.5
LSM6-202ENST00000502781 C11orf68Q9H3H3 251 aaKnown RBP18.17■□□□□ 0.5
LSM6-202ENST00000502781 IGKV2-40A0A087WW87 121 aaPredicted RBP18.17■□□□□ 0.5
LSM6-202ENST00000502781 RBAKDNA6NC62 111 aa18.17■□□□□ 0.5
LSM6-202ENST00000502781 PGPA6NDG6 321 aa18.17■□□□□ 0.5
LSM6-202ENST00000502781 IGKV2D-40P01614 121 aaPredicted RBP18.17■□□□□ 0.5
LSM6-202ENST00000502781 MIFP14174 115 aa18.17■□□□□ 0.5
LSM6-202ENST00000502781 CSN1S1P47710 185 aa18.17■□□□□ 0.5
LSM6-202ENST00000502781 ERCC8Q13216 396 aa18.17■□□□□ 0.5
LSM6-202ENST00000502781 DPPA3Q6W0C5 159 aa18.17■□□□□ 0.5
LSM6-202ENST00000502781 PPP1R14DQ9NXH3 145 aa18.17■□□□□ 0.5
LSM6-202ENST00000502781 MAP1LC3B2A6NCE7 125 aa18.16■□□□□ 0.5
LSM6-202ENST00000502781 FAM74A1Q5RGS3 127 aa18.16■□□□□ 0.5
LSM6-202ENST00000502781 FAM19A4Q96LR4 140 aa18.16■□□□□ 0.5
LSM6-202ENST00000502781 MAP1LC3BQ9GZQ8 125 aa18.16■□□□□ 0.5
LSM6-202ENST00000502781 DIRC3C9JPN6 131 aa18.15■□□□□ 0.5
LSM6-202ENST00000502781 INSP01308 110 aa18.15■□□□□ 0.5
LSM6-202ENST00000502781 SLC25A5P05141 298 aaKnown RBP18.15■□□□□ 0.5
LSM6-202ENST00000502781 TSPOP30536 169 aa18.15■□□□□ 0.5
LSM6-202ENST00000502781 MBD3L1Q8WWY6 194 aa18.15■□□□□ 0.5
LSM6-202ENST00000502781 VGLL1Q99990 258 aa18.15■□□□□ 0.5
LSM6-202ENST00000502781 TMPRSS5Q9H3S3 457 aa18.15■□□□□ 0.5
LSM6-202ENST00000502781 GOLT1BQ9Y3E0 138 aa18.15■□□□□ 0.5
LSM6-202ENST00000502781 DNAH7Q8WXX0 4024 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms