RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 LTAP01374 205 aa5.88□□□□□ -1.47
PDGFC-203ENST00000502773 FOXA3P55318 350 aaPredicted RBP5.88□□□□□ -1.47
PDGFC-203ENST00000502773 MEIG1Q5JSS6 88 aa5.88□□□□□ -1.47
PDGFC-203ENST00000502773 WI2-2373I1.2A0A1W2PRP0 233 aa5.88□□□□□ -1.47
PDGFC-203ENST00000502773 M0QXV9 152 aa5.88□□□□□ -1.47
PDGFC-203ENST00000502773 TSPAN13O95857 204 aa5.88□□□□□ -1.47
PDGFC-203ENST00000502773 GPX1P07203 203 aa5.88□□□□□ -1.47
PDGFC-203ENST00000502773 PYYP10082 97 aa5.88□□□□□ -1.47
PDGFC-203ENST00000502773 C5orf47Q569G3 176 aa5.88□□□□□ -1.47
PDGFC-203ENST00000502773 ASCL2Q99929 193 aa5.88□□□□□ -1.47
PDGFC-203ENST00000502773 GNB4Q9HAV0 340 aa5.88□□□□□ -1.47
PDGFC-203ENST00000502773 C5orf42Q9H799 3197 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 IGLV11-55A0A075B6I3 123 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 IGKV1D-37A0A075B6S9 117 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 TRAV8-1A0A0A6YYK1 113 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 A0A1B0GUT8 65 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 A0A1W2PRD5 423 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 A0A1W2PRF3 423 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 A0A1W2PRM7 423 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 PRSS1P07477 247 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 RPL32P62910 135 aaKnown RBP5.87□□□□□ -1.47
PDGFC-203ENST00000502773 C1orf159Q96HA4 380 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 J3QLI3 93 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 GP9P14770 177 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 SRSF2Q01130 221 aaKnown RBP5.87□□□□□ -1.47
PDGFC-203ENST00000502773 PRNTQ86SH4 94 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 PSG8Q9UQ74 426 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 RBAKDNA6NC62 111 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 OR2J3O76001 311 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 SMIM17P0DL12 118 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 IGLL1P15814 213 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 MLANAQ16655 118 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 PATE2Q6UY27 113 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 CFHR4Q92496 578 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 MCRIP2Q9BUT9 160 aaKnown RBP5.87□□□□□ -1.47
PDGFC-203ENST00000502773 C1QTNF4Q9BXJ3 329 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 SIRPDQ9H106 197 aa5.87□□□□□ -1.47
PDGFC-203ENST00000502773 HIGD1CA8MV81 97 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 F2Z2F3 143 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 K7EP34 96 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 HOXB4P17483 251 aaPredicted RBP5.86□□□□□ -1.47
PDGFC-203ENST00000502773 MYCNOSP40205 109 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 SRSF9Q13242 221 aaKnown RBP eCLIP5.86□□□□□ -1.47
PDGFC-203ENST00000502773 DIAPH2-AS1Q14236 149 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 GOLT1AQ6ZVE7 132 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 MAP1LC3AQ9H492 121 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 ZNRD1Q9P1U0 126 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 ZGRF1Q86YA3 2104 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 MKI67P46013 3256 aaKnown RBP5.86□□□□□ -1.47
PDGFC-203ENST00000502773 KLF5Q13887 457 aaPredicted RBP5.86□□□□□ -1.47
PDGFC-203ENST00000502773 BVES-AS1Q5T3Y7 98 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 Q86TA4 180 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 ZNF491Q8N8L2 437 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 ITLN2Q8WWU7 325 aaPredicted RBP5.86□□□□□ -1.47
PDGFC-203ENST00000502773 HIST1H4GQ99525 98 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 RNASE7Q9H1E1 156 aaKnown RBP5.86□□□□□ -1.47
PDGFC-203ENST00000502773 K7EIM0 57 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 K7EN84 100 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 NUPR1O60356 82 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 SCGB1D4Q6XE38 83 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 SH2D6Q7Z4S9 175 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 ZNF503Q96F45 646 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 YLPM1P49750 1951 aaKnown RBP5.86□□□□□ -1.47
PDGFC-203ENST00000502773 HCFC1P51610 2035 aa5.86□□□□□ -1.47
PDGFC-203ENST00000502773 B4DSR2 109 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 HAX1O00165 279 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 SPAG8Q99932 426 aaPredicted RBP5.85□□□□□ -1.47
PDGFC-203ENST00000502773 CADP27708 2225 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 TRBV20OR9-2A0A075B6H5 130 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 CGB1A6NKQ9 187 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 BRI3O95415 125 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 COX6B1P14854 86 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 TMEM78Q5T7P6 136 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 Q8N6K4 173 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 NUP35Q8NFH5 326 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 TPSG1Q9NRR2 321 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 LENEPQ9Y5L5 61 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 TTC28Q96AY4 2481 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 C9orf118A6NHY6 69 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 FABP5P3A8MUU1 101 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 H7C2G1 150 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 TAX1BP3O14907 124 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 PPIFP30405 207 aaKnown RBP5.85□□□□□ -1.47
PDGFC-203ENST00000502773 DEFB125Q8N687 156 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 DSCAMO60469 2012 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 IGHV1-69DA0A0B4J2H0 117 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 TMEM89A2RUT3 159 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 LINC01549A6NIU2 74 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 TMEM262E9PQX1 116 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 TNFRSF6BO95407 300 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 IGKV1-17P01599 117 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 IGHV1-69P01742 117 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 KLK9Q2XQG4 91 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 C9orf153Q5TBE3 101 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 KLK9Q9UKQ9 250 aa5.85□□□□□ -1.47
PDGFC-203ENST00000502773 USP34Q70CQ2 3546 aa5.84□□□□□ -1.47
PDGFC-203ENST00000502773 PPP1R17O96001 155 aa5.84□□□□□ -1.47
PDGFC-203ENST00000502773 EVI2AP22794 236 aa5.84□□□□□ -1.47
PDGFC-203ENST00000502773 GNG5P63218 68 aa5.84□□□□□ -1.47
PDGFC-203ENST00000502773 ECSCRQ19T08 205 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms