RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	UHRF2	Q96PU4	802 aa		5.53	□□□□□ -1.52
GARNL3-222	ENST00000498801	SHANK2-AS3	Q9BTD1	123 aa		5.53	□□□□□ -1.52
GARNL3-222	ENST00000498801	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	5.53	□□□□□ -1.52
GARNL3-222	ENST00000498801	ARV1	Q9H2C2	271 aa		5.53	□□□□□ -1.52
GARNL3-222	ENST00000498801	DNAJC4	Q9NNZ3	241 aa		5.53	□□□□□ -1.52
GARNL3-222	ENST00000498801	MLX	Q9UH92	298 aa		5.53	□□□□□ -1.52
GARNL3-222	ENST00000498801	SELENOK	Q9Y6D0	94 aa		5.53	□□□□□ -1.52
GARNL3-222	ENST00000498801	IGLV5-37	A0A075B6J1	123 aa		5.52	□□□□□ -1.53
GARNL3-222	ENST00000498801	ZNF98	A6NK75	572 aa		5.52	□□□□□ -1.53
GARNL3-222	ENST00000498801	SPP1	P10451	314 aa		5.52	□□□□□ -1.53
GARNL3-222	ENST00000498801	TPT1	P13693	172 aa	Known RBP	5.52	□□□□□ -1.53
GARNL3-222	ENST00000498801	KRTAP10-11	P60412	298 aa		5.52	□□□□□ -1.53
GARNL3-222	ENST00000498801	RAB2A	P61019	212 aa		5.52	□□□□□ -1.53
GARNL3-222	ENST00000498801	SERF2	P84101	59 aa		5.52	□□□□□ -1.53
GARNL3-222	ENST00000498801	C1orf194	Q5T5A4	169 aa		5.52	□□□□□ -1.53
GARNL3-222	ENST00000498801	LINC00305	Q7Z4B0	112 aa		5.52	□□□□□ -1.53
GARNL3-222	ENST00000498801	BAP18	Q8IXM2	172 aa		5.52	□□□□□ -1.53
GARNL3-222	ENST00000498801	TMEM61	Q8N0U2	210 aa		5.52	□□□□□ -1.53
GARNL3-222	ENST00000498801	STOML3	Q8TAV4	291 aa		5.52	□□□□□ -1.53
GARNL3-222	ENST00000498801	GATAD1	Q8WUU5	269 aa		5.52	□□□□□ -1.53
GARNL3-222	ENST00000498801	RNF2	Q99496	336 aa		5.52	□□□□□ -1.53
GARNL3-222	ENST00000498801	SCRT1	Q9BWW7	348 aa		5.52	□□□□□ -1.53
GARNL3-222	ENST00000498801	SLC25A22	Q9H936	323 aa		5.52	□□□□□ -1.53
GARNL3-222	ENST00000498801	RNF24	Q9Y225	148 aa		5.52	□□□□□ -1.53
GARNL3-222	ENST00000498801	NOTCH3	Q9UM47	2321 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	TRAV25	A0A0B4J276	109 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	IZUMO1R	A6ND01	250 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	HELT	A6NFD8	242 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	MB	P02144	154 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	CD5	P06127	495 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	SEC11B	P0C7V7	166 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	M6PR	P20645	277 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	SNRPE	P62304	92 aa	Known RBP	5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	ACOT6	Q3I5F7	207 aa	Predicted RBP	5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	FAM78B	Q5VT40	261 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	LEMD1	Q68G75	181 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	LCN12	Q6JVE5	192 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	RBPMS2	Q6ZRY4	209 aa	Known RBP	5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801		Q75L30	129 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	TCF24	Q7RTU0	167 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	SLC51B	Q86UW2	128 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	OR8I2	Q8N0Y5	310 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	OR10G4	Q8NGN3	311 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	OR10G9	Q8NGN4	311 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	OR10G7	Q8NGN6	311 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	GPR82	Q96P67	336 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	MRPL32	Q9BYC8	188 aa	Known RBP	5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	FUT9	Q9Y231	359 aa		5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	ZNF256	Q9Y2P7	627 aa	Predicted RBP	5.51	□□□□□ -1.53
GARNL3-222	ENST00000498801	IGKV3-7	A0A075B6H7	116 aa		5.5	□□□□□ -1.53
GARNL3-222	ENST00000498801	TRAV5	A0A0B4J249	113 aa		5.5	□□□□□ -1.53
GARNL3-222	ENST00000498801	RPL7	P18124	248 aa	Known RBP	5.5	□□□□□ -1.53
GARNL3-222	ENST00000498801	RHOB	P62745	196 aa		5.5	□□□□□ -1.53
GARNL3-222	ENST00000498801	DEFA6	Q01524	100 aa		5.5	□□□□□ -1.53
GARNL3-222	ENST00000498801	GAGE2B	Q13066	116 aa		5.5	□□□□□ -1.53
GARNL3-222	ENST00000498801	GUCA2B	Q16661	112 aa		5.5	□□□□□ -1.53
GARNL3-222	ENST00000498801	GAGE2E	Q4V326	116 aa		5.5	□□□□□ -1.53
GARNL3-222	ENST00000498801	TMEM41B	Q5BJD5	291 aa		5.5	□□□□□ -1.53
GARNL3-222	ENST00000498801	SPATA31B1P	Q5VZV4	182 aa		5.5	□□□□□ -1.53
GARNL3-222	ENST00000498801	EIF5AL1	Q6IS14	154 aa	Known RBP	5.5	□□□□□ -1.53
GARNL3-222	ENST00000498801	GAGE2A	Q6NT46	116 aa		5.5	□□□□□ -1.53
GARNL3-222	ENST00000498801	SIGLEC15	Q6ZMC9	328 aa		5.5	□□□□□ -1.53
GARNL3-222	ENST00000498801	MIR17HG	Q75NE6	70 aa		5.5	□□□□□ -1.53
GARNL3-222	ENST00000498801	GAGE2D	Q9UEU5	116 aa		5.5	□□□□□ -1.53
GARNL3-222	ENST00000498801		A0A1W2PPV4	95 aa		5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	UMAD1	C9J7I0	102 aa		5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	MRPS12	O15235	138 aa	Known RBP	5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	GALR1	P47211	349 aa		5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	CDC34	P49427	236 aa	Predicted RBP	5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	CD81	P60033	236 aa		5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	PAFAH1B2	P68402	229 aa		5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	AKR1C8P	Q5T2L2	129 aa		5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	BPIFA4P	Q86YQ2	179 aa		5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	GBGT1	Q8N5D6	347 aa		5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	RPP25L	Q8N5L8	163 aa	Known RBP	5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	STXBP6	Q8NFX7	210 aa		5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	ZNF479	Q96JC4	524 aa		5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	FAM167A-AS1	Q96KT0	104 aa		5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	SPAG8	Q99932	426 aa	Predicted RBP	5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	SLC25A2	Q9BXI2	301 aa		5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	ACTR3C	Q9C0K3	210 aa	Predicted RBP	5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	MS4A6A	Q9H2W1	248 aa		5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	NRN1	Q9NPD7	142 aa		5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	RPRM	Q9NS64	109 aa		5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	TMEM14C	Q9P0S9	112 aa		5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	SMAD5-AS1	Q9Y6J3	95 aa		5.49	□□□□□ -1.53
GARNL3-222	ENST00000498801	DNAH3	Q8TD57	4116 aa		5.48	□□□□□ -1.53
GARNL3-222	ENST00000498801	TRAV2	A0A0B4J234	112 aa		5.48	□□□□□ -1.53
GARNL3-222	ENST00000498801	OR4C46	A6NHA9	309 aa		5.48	□□□□□ -1.53
GARNL3-222	ENST00000498801		K7EIL1	84 aa		5.48	□□□□□ -1.53
GARNL3-222	ENST00000498801	DNASE2	O00115	360 aa	Predicted RBP	5.48	□□□□□ -1.53
GARNL3-222	ENST00000498801	EIF3G	O75821	320 aa	Known RBP eCLIP	5.48	□□□□□ -1.53
GARNL3-222	ENST00000498801	IGLC2	P0DOY2	106 aa		5.48	□□□□□ -1.53
GARNL3-222	ENST00000498801	GP9	P14770	177 aa		5.48	□□□□□ -1.53
GARNL3-222	ENST00000498801	TFPI2	P48307	235 aa		5.48	□□□□□ -1.53
GARNL3-222	ENST00000498801	TAS2R45	P59539	299 aa		5.48	□□□□□ -1.53
GARNL3-222	ENST00000498801	KHDC3L	Q587J8	217 aa		5.48	□□□□□ -1.53
GARNL3-222	ENST00000498801	DPPA3	Q6W0C5	159 aa		5.48	□□□□□ -1.53
GARNL3-222	ENST00000498801	DCANP1	Q8TF63	244 aa		5.48	□□□□□ -1.53
GARNL3-222	ENST00000498801	PHYHIPL	Q96FC7	376 aa		5.48	□□□□□ -1.53

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