RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 PRSS3P2Q8NHM4 247 aa12.9□□□□□ -0.34
COL6A1-206ENST00000498614 TPPP3Q9BW30 176 aa12.9□□□□□ -0.34
COL6A1-206ENST00000498614 LY6LH3BQJ8 138 aa12.89□□□□□ -0.35
COL6A1-206ENST00000498614 CNIH1O95406 144 aa12.89□□□□□ -0.35
COL6A1-206ENST00000498614 RBP4P02753 201 aa12.89□□□□□ -0.35
COL6A1-206ENST00000498614 CRIP1P50238 77 aa12.89□□□□□ -0.35
COL6A1-206ENST00000498614 GATD1Q8NB37 220 aa12.89□□□□□ -0.35
COL6A1-206ENST00000498614 HILPDAQ9Y5L2 63 aa12.89□□□□□ -0.35
COL6A1-206ENST00000498614 FAM208BQ5VWN6 2430 aa12.89□□□□□ -0.35
COL6A1-206ENST00000498614 TRBV6-1A0A0K0K1D8 114 aa12.89□□□□□ -0.35
COL6A1-206ENST00000498614 C7orf71A4D174 169 aa12.89□□□□□ -0.35
COL6A1-206ENST00000498614 OR10AG1Q8NH19 301 aa12.89□□□□□ -0.35
COL6A1-206ENST00000498614 ITLN2Q8WWU7 325 aaPredicted RBP12.89□□□□□ -0.35
COL6A1-206ENST00000498614 A0A096LNJ9 63 aa12.88□□□□□ -0.35
COL6A1-206ENST00000498614 GAGE12BA1L429 117 aa12.88□□□□□ -0.35
COL6A1-206ENST00000498614 I3L2K1 104 aa12.88□□□□□ -0.35
COL6A1-206ENST00000498614 IFI27P40305 119 aaPredicted RBP12.88□□□□□ -0.35
COL6A1-206ENST00000498614 FBXL19-AS1Q494R0 122 aa12.88□□□□□ -0.35
COL6A1-206ENST00000498614 PIP4P2Q8N4L2 257 aa12.88□□□□□ -0.35
COL6A1-206ENST00000498614 PEF1Q9UBV8 284 aaKnown RBP12.88□□□□□ -0.35
COL6A1-206ENST00000498614 TRBV19A0A075B6N1 114 aa12.88□□□□□ -0.35
COL6A1-206ENST00000498614 A0A1W2PRD5 423 aa12.88□□□□□ -0.35
COL6A1-206ENST00000498614 A0A1W2PRF3 423 aa12.88□□□□□ -0.35
COL6A1-206ENST00000498614 A0A1W2PRM7 423 aa12.88□□□□□ -0.35
COL6A1-206ENST00000498614 FGF6P10767 208 aa12.88□□□□□ -0.35
COL6A1-206ENST00000498614 CSN1S1P47710 185 aa12.88□□□□□ -0.35
COL6A1-206ENST00000498614 PAX2Q02962 417 aa12.88□□□□□ -0.35
COL6A1-206ENST00000498614 KLRD1Q13241 179 aa12.88□□□□□ -0.35
COL6A1-206ENST00000498614 TMEM97Q5BJF2 176 aa12.88□□□□□ -0.35
COL6A1-206ENST00000498614 PSG8Q9UQ74 426 aa12.88□□□□□ -0.35
COL6A1-206ENST00000498614 LOC389332A0A1B0GUA5 103 aa12.87□□□□□ -0.35
COL6A1-206ENST00000498614 TMEM75Q8N9X5 138 aa12.87□□□□□ -0.35
COL6A1-206ENST00000498614 OR8A1Q8NGG7 326 aa12.87□□□□□ -0.35
COL6A1-206ENST00000498614 RASL11BQ9BPW5 248 aa12.87□□□□□ -0.35
COL6A1-206ENST00000498614 IGKV1-17P01599 117 aa12.87□□□□□ -0.35
COL6A1-206ENST00000498614 HRNRQ86YZ3 2850 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-206ENST00000498614 LY6G5BQ8NDX9 201 aa12.87□□□□□ -0.35
COL6A1-206ENST00000498614 SIGLEC15Q6ZMC9 328 aa12.86□□□□□ -0.35
COL6A1-206ENST00000498614 C19orf84I3L1E1 186 aa12.86□□□□□ -0.35
COL6A1-206ENST00000498614 TCTAP57738 103 aa12.86□□□□□ -0.35
COL6A1-206ENST00000498614 SHANK2-AS3Q9BTD1 123 aa12.86□□□□□ -0.35
COL6A1-206ENST00000498614 RAB1BQ9H0U4 201 aa12.86□□□□□ -0.35
COL6A1-206ENST00000498614 CSMD1Q96PZ7 3565 aa12.85□□□□□ -0.35
COL6A1-206ENST00000498614 SERTM2A0A1B0GWG4 89 aa12.85□□□□□ -0.35
COL6A1-206ENST00000498614 PSG3Q16557 428 aa12.85□□□□□ -0.35
COL6A1-206ENST00000498614 C8orf49Q96NF6 230 aa12.85□□□□□ -0.35
COL6A1-206ENST00000498614 RNF5Q99942 180 aa12.85□□□□□ -0.35
COL6A1-206ENST00000498614 SIGLEC8Q9NYZ4 499 aa12.85□□□□□ -0.35
COL6A1-206ENST00000498614 S4R3C0 116 aa12.85□□□□□ -0.35
COL6A1-206ENST00000498614 D6R8Y8 96 aa12.85□□□□□ -0.35
COL6A1-206ENST00000498614 M0R3E3 92 aa12.85□□□□□ -0.35
COL6A1-206ENST00000498614 FXYD7P58549 80 aa12.85□□□□□ -0.35
COL6A1-206ENST00000498614 SEC11AP67812 179 aa12.85□□□□□ -0.35
COL6A1-206ENST00000498614 DPM3Q9P2X0 92 aa12.85□□□□□ -0.35
COL6A1-206ENST00000498614 RABAC1Q9UI14 185 aa12.85□□□□□ -0.35
COL6A1-206ENST00000498614 TMSB15BA0A087X1C1 80 aa12.84□□□□□ -0.35
COL6A1-206ENST00000498614 A0A1B0GW15 77 aa12.84□□□□□ -0.35
COL6A1-206ENST00000498614 TMEM213A2RRL7 107 aa12.84□□□□□ -0.35
COL6A1-206ENST00000498614 K7EIM0 57 aa12.84□□□□□ -0.35
COL6A1-206ENST00000498614 NBR2O15453 112 aa12.84□□□□□ -0.35
COL6A1-206ENST00000498614 KLF17Q5JT82 389 aaPredicted RBP12.84□□□□□ -0.35
COL6A1-206ENST00000498614 H3BRN7 92 aa12.84□□□□□ -0.35
COL6A1-206ENST00000498614 HES1Q14469 280 aa12.84□□□□□ -0.35
COL6A1-206ENST00000498614 CFHR4Q92496 578 aa12.84□□□□□ -0.35
COL6A1-206ENST00000498614 TIMD4Q96H15 378 aa12.84□□□□□ -0.35
COL6A1-206ENST00000498614 JMJD8Q96S16 334 aa12.84□□□□□ -0.35
COL6A1-206ENST00000498614 SELENOKQ9Y6D0 94 aa12.84□□□□□ -0.35
COL6A1-206ENST00000498614 LYZL1Q6UWQ5 148 aa12.83□□□□□ -0.36
COL6A1-206ENST00000498614 ZNF493Q6ZR52 646 aa12.83□□□□□ -0.36
COL6A1-206ENST00000498614 AMN1Q8IY45 258 aa12.83□□□□□ -0.36
COL6A1-206ENST00000498614 CSMD2Q7Z408 3487 aa12.83□□□□□ -0.36
COL6A1-206ENST00000498614 GAGE10A6NGK3 116 aa12.83□□□□□ -0.36
COL6A1-206ENST00000498614 K7EQM0 130 aa12.83□□□□□ -0.36
COL6A1-206ENST00000498614 SMIM15Q7Z3B0 74 aa12.83□□□□□ -0.36
COL6A1-206ENST00000498614 OR11H6Q8NGC7 330 aa12.83□□□□□ -0.36
COL6A1-206ENST00000498614 SPOCK3Q9BQ16 436 aa12.83□□□□□ -0.36
COL6A1-206ENST00000498614 LRRK2Q5S007 2527 aa12.82□□□□□ -0.36
COL6A1-206ENST00000498614 UBR5O95071 2799 aaPredicted RBP12.82□□□□□ -0.36
COL6A1-206ENST00000498614 SAP30O75446 220 aa12.82□□□□□ -0.36
COL6A1-206ENST00000498614 CACNG7P62955 275 aa12.82□□□□□ -0.36
COL6A1-206ENST00000498614 Q6AWC8 147 aa12.82□□□□□ -0.36
COL6A1-206ENST00000498614 UFSP1Q6NVU6 142 aa12.82□□□□□ -0.36
COL6A1-206ENST00000498614 DPF1Q92782 380 aa12.82□□□□□ -0.36
COL6A1-206ENST00000498614 ZNF414Q96IQ9 312 aa12.82□□□□□ -0.36
COL6A1-206ENST00000498614 PRELID3AQ96N28 172 aa12.82□□□□□ -0.36
COL6A1-206ENST00000498614 NAA38Q9BRA0 125 aaKnown RBP12.82□□□□□ -0.36
COL6A1-206ENST00000498614 U3KQK5 164 aa12.82□□□□□ -0.36
COL6A1-206ENST00000498614 AKAP6Q13023 2319 aa12.82□□□□□ -0.36
COL6A1-206ENST00000498614 MRPS12O15235 138 aaKnown RBP12.81□□□□□ -0.36
COL6A1-206ENST00000498614 BCL6BQ8N143 479 aaPredicted RBP12.81□□□□□ -0.36
COL6A1-206ENST00000498614 DOPEY1Q5JWR5 2465 aa12.81□□□□□ -0.36
COL6A1-206ENST00000498614 K7ERU9 68 aa12.81□□□□□ -0.36
COL6A1-206ENST00000498614 LGALS9BQ3B8N2 356 aa12.81□□□□□ -0.36
COL6A1-206ENST00000498614 FAM104BQ5XKR9 115 aa12.81□□□□□ -0.36
COL6A1-206ENST00000498614 LGALS9CQ6DKI2 356 aa12.81□□□□□ -0.36
COL6A1-206ENST00000498614 BOD1L2Q8IYS8 172 aa12.81□□□□□ -0.36
COL6A1-206ENST00000498614 ZNF491Q8N8L2 437 aa12.81□□□□□ -0.36
COL6A1-206ENST00000498614 SRSF8Q9BRL6 282 aaKnown RBP12.81□□□□□ -0.36
COL6A1-206ENST00000498614 C9orf118A6NHY6 69 aa12.8□□□□□ -0.36
COL6A1-206ENST00000498614 FCGR2BP31994 310 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms