RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 HLA-DRB4X5D2U9 266 aa9.41□□□□□ -0.9
TMEM39B-209ENST00000498613 TRAV8-2A0A0B4J237 113 aa9.4□□□□□ -0.9
TMEM39B-209ENST00000498613 A0A0J9YX75 114 aa9.4□□□□□ -0.9
TMEM39B-209ENST00000498613 HMGB3O15347 200 aaKnown RBP9.4□□□□□ -0.9
TMEM39B-209ENST00000498613 ICAM4Q14773 271 aa9.4□□□□□ -0.9
TMEM39B-209ENST00000498613 TRPT1Q86TN4 253 aaKnown RBP9.4□□□□□ -0.9
TMEM39B-209ENST00000498613 RCHY1Q96PM5 261 aa9.4□□□□□ -0.9
TMEM39B-209ENST00000498613 SPRY2O43597 315 aa9.39□□□□□ -0.91
TMEM39B-209ENST00000498613 CA1P00915 261 aaPredicted RBP9.39□□□□□ -0.91
TMEM39B-209ENST00000498613 IGKV3-20P01619 116 aa9.39□□□□□ -0.91
TMEM39B-209ENST00000498613 AMBPP02760 352 aa9.39□□□□□ -0.91
TMEM39B-209ENST00000498613 ARL14EPLP0DKL9 152 aa9.39□□□□□ -0.91
TMEM39B-209ENST00000498613 TSPOP30536 169 aa9.39□□□□□ -0.91
TMEM39B-209ENST00000498613 HIST1H1AQ02539 215 aaPredicted RBP9.39□□□□□ -0.91
TMEM39B-209ENST00000498613 OR8A1Q8NGG7 326 aa9.39□□□□□ -0.91
TMEM39B-209ENST00000498613 TMED6Q8WW62 240 aa9.39□□□□□ -0.91
TMEM39B-209ENST00000498613 C20orf173Q96LM9 149 aa9.39□□□□□ -0.91
TMEM39B-209ENST00000498613 NKX6-2Q9C056 277 aaPredicted RBP9.39□□□□□ -0.91
TMEM39B-209ENST00000498613 TP53TG1Q9Y2A0 90 aa9.39□□□□□ -0.91
TMEM39B-209ENST00000498613 RYR3Q15413 4870 aa9.39□□□□□ -0.91
TMEM39B-209ENST00000498613 PGPA6NDG6 321 aa9.38□□□□□ -0.91
TMEM39B-209ENST00000498613 K7EQM0 130 aa9.38□□□□□ -0.91
TMEM39B-209ENST00000498613 SLC17A3O00476 420 aa9.38□□□□□ -0.91
TMEM39B-209ENST00000498613 H2AFB1P0C5Y9 115 aa9.38□□□□□ -0.91
TMEM39B-209ENST00000498613 GCHFRP30047 84 aa9.38□□□□□ -0.91
TMEM39B-209ENST00000498613 C9orf62Q8N4C0 152 aa9.38□□□□□ -0.91
TMEM39B-209ENST00000498613 ARL6IP6Q8N6S5 226 aa9.38□□□□□ -0.91
TMEM39B-209ENST00000498613 FAM213BQ8TBF2 198 aa9.38□□□□□ -0.91
TMEM39B-209ENST00000498613 SFT2D1Q8WV19 159 aa9.38□□□□□ -0.91
TMEM39B-209ENST00000498613 PHYHIPLQ96FC7 376 aa9.38□□□□□ -0.91
TMEM39B-209ENST00000498613 LINC00477Q96M19 166 aa9.38□□□□□ -0.91
TMEM39B-209ENST00000498613 TM2D3Q9BRN9 247 aa9.38□□□□□ -0.91
TMEM39B-209ENST00000498613 Q9H3A6 140 aa9.38□□□□□ -0.91
TMEM39B-209ENST00000498613 OTORQ9NRC9 128 aa9.38□□□□□ -0.91
TMEM39B-209ENST00000498613 U3KQK5 164 aa9.38□□□□□ -0.91
TMEM39B-209ENST00000498613 MAP1LC3B2A6NCE7 125 aa9.37□□□□□ -0.91
TMEM39B-209ENST00000498613 ZNF705FA8MVS1 300 aaPredicted RBP9.37□□□□□ -0.91
TMEM39B-209ENST00000498613 F6UB75 175 aa9.37□□□□□ -0.91
TMEM39B-209ENST00000498613 NDUFB4O95168 129 aa9.37□□□□□ -0.91
TMEM39B-209ENST00000498613 PPT1P50897 306 aa9.37□□□□□ -0.91
TMEM39B-209ENST00000498613 CNN1P51911 297 aaKnown RBP9.37□□□□□ -0.91
TMEM39B-209ENST00000498613 CD300CQ08708 224 aa9.37□□□□□ -0.91
TMEM39B-209ENST00000498613 EXOC3-AS1Q8N2X6 119 aa9.37□□□□□ -0.91
TMEM39B-209ENST00000498613 MAP1LC3BQ9GZQ8 125 aa9.37□□□□□ -0.91
TMEM39B-209ENST00000498613 A0A1W2PRE2 83 aa9.36□□□□□ -0.91
TMEM39B-209ENST00000498613 HLA-DMBP28068 263 aa9.36□□□□□ -0.91
TMEM39B-209ENST00000498613 TMEM78Q5T7P6 136 aa9.36□□□□□ -0.91
TMEM39B-209ENST00000498613 GDF5OSQ5U4N7 250 aa9.36□□□□□ -0.91
TMEM39B-209ENST00000498613 RNF183Q96D59 192 aa9.36□□□□□ -0.91
TMEM39B-209ENST00000498613 ZNF503Q96F45 646 aa9.36□□□□□ -0.91
TMEM39B-209ENST00000498613 RARRES2Q99969 163 aa9.36□□□□□ -0.91
TMEM39B-209ENST00000498613 SERTM2A0A1B0GWG4 89 aa9.35□□□□□ -0.91
TMEM39B-209ENST00000498613 F6UZH7 168 aa9.35□□□□□ -0.91
TMEM39B-209ENST00000498613 IFNA7P01567 189 aa9.35□□□□□ -0.91
TMEM39B-209ENST00000498613 HBE1P02100 147 aa9.35□□□□□ -0.91
TMEM39B-209ENST00000498613 SLC25A5P05141 298 aaKnown RBP9.35□□□□□ -0.91
TMEM39B-209ENST00000498613 ZNF705DP0CH99 300 aaPredicted RBP9.35□□□□□ -0.91
TMEM39B-209ENST00000498613 ZNF705BP0CI00 300 aaPredicted RBP9.35□□□□□ -0.91
TMEM39B-209ENST00000498613 LEPP41159 167 aa9.35□□□□□ -0.91
TMEM39B-209ENST00000498613 COL7A1Q02388 2944 aa9.35□□□□□ -0.91
TMEM39B-209ENST00000498613 DEFB135Q30KP9 77 aa9.35□□□□□ -0.91
TMEM39B-209ENST00000498613 MBD3L1Q8WWY6 194 aa9.35□□□□□ -0.91
TMEM39B-209ENST00000498613 TMEM208Q9BTX3 173 aa9.35□□□□□ -0.91
TMEM39B-209ENST00000498613 XCL2Q9UBD3 114 aa9.35□□□□□ -0.91
TMEM39B-209ENST00000498613 GOLT1BQ9Y3E0 138 aa9.35□□□□□ -0.91
TMEM39B-209ENST00000498613 RBAKDNA6NC62 111 aa9.34□□□□□ -0.91
TMEM39B-209ENST00000498613 M0R3E3 92 aa9.34□□□□□ -0.91
TMEM39B-209ENST00000498613 EIF3GO75821 320 aaKnown RBP eCLIP9.34□□□□□ -0.91
TMEM39B-209ENST00000498613 SULT1A2P50226 295 aa9.34□□□□□ -0.91
TMEM39B-209ENST00000498613 FGF8P55075 233 aaPredicted RBP9.34□□□□□ -0.91
TMEM39B-209ENST00000498613 DEFB1P60022 68 aa9.34□□□□□ -0.91
TMEM39B-209ENST00000498613 SUMO1P63165 101 aaKnown RBP9.34□□□□□ -0.91
TMEM39B-209ENST00000498613 BLOC1S1P78537 153 aa9.34□□□□□ -0.91
TMEM39B-209ENST00000498613 SUN5Q8TC36 379 aa9.34□□□□□ -0.91
TMEM39B-209ENST00000498613 FBLL1A6NHQ2 334 aaKnown RBP9.33□□□□□ -0.92
TMEM39B-209ENST00000498613 BOLA2-SMG1P6H3BVE0 249 aa9.33□□□□□ -0.92
TMEM39B-209ENST00000498613 CDKN1BP46527 198 aa9.33□□□□□ -0.92
TMEM39B-209ENST00000498613 NKX2-5P52952 324 aaPredicted RBP9.33□□□□□ -0.92
TMEM39B-209ENST00000498613 ZNF726P1Q15940 193 aa9.33□□□□□ -0.92
TMEM39B-209ENST00000498613 CST9LP1Q5W188 147 aa9.33□□□□□ -0.92
TMEM39B-209ENST00000498613 C9orf47Q6ZRZ4 202 aa9.33□□□□□ -0.92
TMEM39B-209ENST00000498613 C5orf17Q8NAS9 161 aa9.33□□□□□ -0.92
TMEM39B-209ENST00000498613 OR11H2Q8NH07 326 aa9.33□□□□□ -0.92
TMEM39B-209ENST00000498613 ODF3Q96PU9 254 aa9.33□□□□□ -0.92
TMEM39B-209ENST00000498613 OVOL2Q9BRP0 275 aa9.33□□□□□ -0.92
TMEM39B-209ENST00000498613 AGRNO00468 2067 aa9.33□□□□□ -0.92
TMEM39B-209ENST00000498613 SMIM9A6NGZ8 99 aa9.32□□□□□ -0.92
TMEM39B-209ENST00000498613 ZNF705EA8MWA4 302 aaPredicted RBP9.32□□□□□ -0.92
TMEM39B-209ENST00000498613 DIRC3C9JPN6 131 aa9.32□□□□□ -0.92
TMEM39B-209ENST00000498613 PRAC2D3DTV9 90 aa9.32□□□□□ -0.92
TMEM39B-209ENST00000498613 NPIPB6E9PJ23 425 aa9.32□□□□□ -0.92
TMEM39B-209ENST00000498613 INSP01308 110 aa9.32□□□□□ -0.92
TMEM39B-209ENST00000498613 IFNA1P01562 189 aa9.32□□□□□ -0.92
TMEM39B-209ENST00000498613 FHITP49789 147 aa9.32□□□□□ -0.92
TMEM39B-209ENST00000498613 FXYD7P58549 80 aa9.32□□□□□ -0.92
TMEM39B-209ENST00000498613 SPINK13Q1W4C9 94 aa9.32□□□□□ -0.92
TMEM39B-209ENST00000498613 TMEM256Q8N2U0 113 aa9.32□□□□□ -0.92
TMEM39B-209ENST00000498613 IL17DQ8TAD2 202 aa9.32□□□□□ -0.92
TMEM39B-209ENST00000498613 IGF2BP2-AS1Q96M15 143 aa9.32□□□□□ -0.92
TMEM39B-209ENST00000498613 TCEAL7Q9BRU2 100 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms