RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 HIST1H1AQ02539 215 aaPredicted RBP11.13□□□□□ -0.63
MUC1-220ENST00000498431 BPIFCQ8NFQ6 507 aa11.13□□□□□ -0.63
MUC1-220ENST00000498431 GPR82Q96P67 336 aa11.13□□□□□ -0.63
MUC1-220ENST00000498431 NOP10Q9NPE3 64 aaKnown RBP11.13□□□□□ -0.63
MUC1-220ENST00000498431 LYRM2Q9NU23 88 aaPredicted RBP11.13□□□□□ -0.63
MUC1-220ENST00000498431 MBD2Q9UBB5 411 aa11.13□□□□□ -0.63
MUC1-220ENST00000498431 TIMM8BQ9Y5J9 83 aaPredicted RBP11.13□□□□□ -0.63
MUC1-220ENST00000498431 MYCBP2O75592 4640 aa11.13□□□□□ -0.63
MUC1-220ENST00000498431 DMBT1Q9UGM3 2413 aaPredicted RBP11.13□□□□□ -0.63
MUC1-220ENST00000498431 TRAV26-1A0A087WT03 109 aa11.12□□□□□ -0.63
MUC1-220ENST00000498431 A0A1B0GVG6 124 aa11.12□□□□□ -0.63
MUC1-220ENST00000498431 H3BRN7 92 aa11.12□□□□□ -0.63
MUC1-220ENST00000498431 CFDP00746 253 aaPredicted RBP11.12□□□□□ -0.63
MUC1-220ENST00000498431 TAS2R60P59551 318 aa11.12□□□□□ -0.63
MUC1-220ENST00000498431 RHOBP62745 196 aa11.12□□□□□ -0.63
MUC1-220ENST00000498431 TMEM252Q8N6L7 170 aa11.12□□□□□ -0.63
MUC1-220ENST00000498431 OR10P1Q8NGE3 313 aa11.12□□□□□ -0.63
MUC1-220ENST00000498431 OR2T35Q8NGX2 323 aa11.12□□□□□ -0.63
MUC1-220ENST00000498431 C16orf74Q96GX8 76 aa11.12□□□□□ -0.63
MUC1-220ENST00000498431 TMEM147Q9BVK8 224 aa11.12□□□□□ -0.63
MUC1-220ENST00000498431 SLC25A31Q9H0C2 315 aa11.12□□□□□ -0.63
MUC1-220ENST00000498431 VPS13BQ7Z7G8 4022 aa11.12□□□□□ -0.63
MUC1-220ENST00000498431 A0A0J9YY99 117 aa11.11□□□□□ -0.63
MUC1-220ENST00000498431 PMS2P5A8MQ11 134 aa11.11□□□□□ -0.63
MUC1-220ENST00000498431 BTF3P20290 206 aaKnown RBP11.11□□□□□ -0.63
MUC1-220ENST00000498431 OR5I1Q13606 314 aa11.11□□□□□ -0.63
MUC1-220ENST00000498431 KIR3DS1Q14943 382 aa11.11□□□□□ -0.63
MUC1-220ENST00000498431 TTC32Q5I0X7 151 aa11.11□□□□□ -0.63
MUC1-220ENST00000498431 TMEM256Q8N2U0 113 aa11.11□□□□□ -0.63
MUC1-220ENST00000498431 OR8A1Q8NGG7 326 aa11.11□□□□□ -0.63
MUC1-220ENST00000498431 RNASE8Q8TDE3 154 aaKnown RBP11.11□□□□□ -0.63
MUC1-220ENST00000498431 GNPNAT1Q96EK6 184 aaPredicted RBP11.11□□□□□ -0.63
MUC1-220ENST00000498431 IGSF23A1L1A6 192 aa11.1□□□□□ -0.63
MUC1-220ENST00000498431 CCNKO75909 580 aa11.1□□□□□ -0.63
MUC1-220ENST00000498431 HOXA5P20719 270 aa11.1□□□□□ -0.63
MUC1-220ENST00000498431 FUSP35637 526 aaKnown RBP eCLIP11.1□□□□□ -0.63
MUC1-220ENST00000498431 SULT1A1P50225 295 aa11.1□□□□□ -0.63
MUC1-220ENST00000498431 ESRGQ1W209 222 aa11.1□□□□□ -0.63
MUC1-220ENST00000498431 Q5BKY6 102 aa11.1□□□□□ -0.63
MUC1-220ENST00000498431 TMEM144Q7Z5S9 345 aa11.1□□□□□ -0.63
MUC1-220ENST00000498431 STX12Q86Y82 276 aa11.1□□□□□ -0.63
MUC1-220ENST00000498431 RXFP4Q8TDU9 374 aa11.1□□□□□ -0.63
MUC1-220ENST00000498431 SHANK2-AS3Q9BTD1 123 aa11.1□□□□□ -0.63
MUC1-220ENST00000498431 ZNF586Q9NXT0 402 aa11.1□□□□□ -0.63
MUC1-220ENST00000498431 EPM2AB3EWF7 344 aa11.09□□□□□ -0.63
MUC1-220ENST00000498431 CST7O76096 145 aa11.09□□□□□ -0.63
MUC1-220ENST00000498431 HBG1P69891 147 aa11.09□□□□□ -0.63
MUC1-220ENST00000498431 HBG2P69892 147 aa11.09□□□□□ -0.63
MUC1-220ENST00000498431 AKR1C1Q04828 323 aa11.09□□□□□ -0.63
MUC1-220ENST00000498431 ARL16Q0P5N6 197 aa11.09□□□□□ -0.63
MUC1-220ENST00000498431 ACOT7LQ6ZUV0 252 aa11.09□□□□□ -0.63
MUC1-220ENST00000498431 TMEM263Q8WUH6 116 aaKnown RBP11.09□□□□□ -0.63
MUC1-220ENST00000498431 UPK3BQ9BT76 320 aa11.09□□□□□ -0.63
MUC1-220ENST00000498431 GGACTQ9BVM4 153 aa11.09□□□□□ -0.63
MUC1-220ENST00000498431 FNDC10F2Z333 226 aa11.08□□□□□ -0.64
MUC1-220ENST00000498431 M6PRP20645 277 aa11.08□□□□□ -0.64
MUC1-220ENST00000498431 S100A11P31949 105 aa11.08□□□□□ -0.64
MUC1-220ENST00000498431 BAXQ07812 192 aa11.08□□□□□ -0.64
MUC1-220ENST00000498431 PSG3Q16557 428 aa11.08□□□□□ -0.64
MUC1-220ENST00000498431 ZNF493Q6ZR52 646 aa11.08□□□□□ -0.64
MUC1-220ENST00000498431 AKAP14Q86UN6 197 aa11.08□□□□□ -0.64
MUC1-220ENST00000498431 LINC00612Q8N6U2 182 aa11.08□□□□□ -0.64
MUC1-220ENST00000498431 ST6GAL2Q96JF0 529 aa11.08□□□□□ -0.64
MUC1-220ENST00000498431 PARD6GQ9BYG4 376 aaPredicted RBP11.08□□□□□ -0.64
MUC1-220ENST00000498431 PPP1R14DQ9NXH3 145 aa11.08□□□□□ -0.64
MUC1-220ENST00000498431 HIGD1AQ9Y241 93 aa11.08□□□□□ -0.64
MUC1-220ENST00000498431 FXYD6-FXYD2A0A087WZ82 144 aa11.07□□□□□ -0.64
MUC1-220ENST00000498431 RPL7P18124 248 aaKnown RBP11.07□□□□□ -0.64
MUC1-220ENST00000498431 RPL12P30050 165 aaKnown RBP11.07□□□□□ -0.64
MUC1-220ENST00000498431 CDKN1BP46527 198 aa11.07□□□□□ -0.64
MUC1-220ENST00000498431 SLC38A11Q08AI6 406 aa11.07□□□□□ -0.64
MUC1-220ENST00000498431 ATP6V1FQ16864 119 aa11.07□□□□□ -0.64
MUC1-220ENST00000498431 Q6ZRN7 208 aaPredicted RBP11.07□□□□□ -0.64
MUC1-220ENST00000498431 CYP2G1PQ6ZSU1 146 aa11.07□□□□□ -0.64
MUC1-220ENST00000498431 OR10J6PQ8NGY7 276 aa11.07□□□□□ -0.64
MUC1-220ENST00000498431 ZNF503Q96F45 646 aa11.07□□□□□ -0.64
MUC1-220ENST00000498431 MRPS16Q9Y3D3 137 aaKnown RBP11.07□□□□□ -0.64
MUC1-220ENST00000498431 A0A087X0K7 114 aa11.06□□□□□ -0.64
MUC1-220ENST00000498431 A0A1W2PPQ1 181 aa11.06□□□□□ -0.64
MUC1-220ENST00000498431 GAGE12BA1L429 117 aa11.06□□□□□ -0.64
MUC1-220ENST00000498431 SMCO3A2RU48 225 aa11.06□□□□□ -0.64
MUC1-220ENST00000498431 G3V3Q6 166 aa11.06□□□□□ -0.64
MUC1-220ENST00000498431 SMLR1H3BR10 107 aa11.06□□□□□ -0.64
MUC1-220ENST00000498431 GAGE7O76087 117 aa11.06□□□□□ -0.64
MUC1-220ENST00000498431 GAGE12FP0CL80 117 aa11.06□□□□□ -0.64
MUC1-220ENST00000498431 GAGE12GP0CL81 117 aa11.06□□□□□ -0.64
MUC1-220ENST00000498431 GAGE12IP0CL82 117 aa11.06□□□□□ -0.64
MUC1-220ENST00000498431 LINC00315P59091 139 aa11.06□□□□□ -0.64
MUC1-220ENST00000498431 NHLH2Q02577 135 aa11.06□□□□□ -0.64
MUC1-220ENST00000498431 ZNF546Q86UE3 836 aa11.06□□□□□ -0.64
MUC1-220ENST00000498431 TCTE3Q8IZS6 198 aa11.06□□□□□ -0.64
MUC1-220ENST00000498431 INO80EQ8NBZ0 244 aaPredicted RBP11.06□□□□□ -0.64
MUC1-220ENST00000498431 RPUSD4Q96CM3 377 aaKnown RBP11.06□□□□□ -0.64
MUC1-220ENST00000498431 HSPB11Q9Y547 144 aa11.06□□□□□ -0.64
MUC1-220ENST00000498431 H7BYZ3 331 aa11.05□□□□□ -0.64
MUC1-220ENST00000498431 HYPMO75409 117 aa11.05□□□□□ -0.64
MUC1-220ENST00000498431 SNRPCP09234 159 aaKnown RBP11.05□□□□□ -0.64
MUC1-220ENST00000498431 OR5G3P0C626 314 aa11.05□□□□□ -0.64
MUC1-220ENST00000498431 LINC00869P0C866 280 aa11.05□□□□□ -0.64
MUC1-220ENST00000498431 INAFM2P0DMQ5 153 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms