RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 ACTL10Q5JWF8 245 aa8.5□□□□□ -1.05
CTTN-208ENST00000498223 CMTM2Q8TAZ6 248 aa8.5□□□□□ -1.05
CTTN-208ENST00000498223 RPUSD4Q96CM3 377 aaKnown RBP8.5□□□□□ -1.05
CTTN-208ENST00000498223 C19orf73Q9NVV2 129 aa8.5□□□□□ -1.05
CTTN-208ENST00000498223 PRELID1Q9Y255 219 aa8.5□□□□□ -1.05
CTTN-208ENST00000498223 ZNF705FA8MVS1 300 aaPredicted RBP8.49□□□□□ -1.05
CTTN-208ENST00000498223 F6UB75 175 aa8.49□□□□□ -1.05
CTTN-208ENST00000498223 IGKV3-20P01619 116 aa8.49□□□□□ -1.05
CTTN-208ENST00000498223 SLC25A5P05141 298 aaKnown RBP8.49□□□□□ -1.05
CTTN-208ENST00000498223 CST9LP1Q5W188 147 aa8.49□□□□□ -1.05
CTTN-208ENST00000498223 TEX261Q6UWH6 196 aa8.49□□□□□ -1.05
CTTN-208ENST00000498223 LYPD1Q8N2G4 141 aa8.49□□□□□ -1.05
CTTN-208ENST00000498223 OR4B1Q8NGF8 309 aa8.49□□□□□ -1.05
CTTN-208ENST00000498223 OR10J6PQ8NGY7 276 aa8.49□□□□□ -1.05
CTTN-208ENST00000498223 OTORQ9NRC9 128 aa8.49□□□□□ -1.05
CTTN-208ENST00000498223 PPP1R14DQ9NXH3 145 aa8.49□□□□□ -1.05
CTTN-208ENST00000498223 M0R3E3 92 aa8.48□□□□□ -1.05
CTTN-208ENST00000498223 ZNF705DP0CH99 300 aaPredicted RBP8.48□□□□□ -1.05
CTTN-208ENST00000498223 ZNF705BP0CI00 300 aaPredicted RBP8.48□□□□□ -1.05
CTTN-208ENST00000498223 PPT1P50897 306 aa8.48□□□□□ -1.05
CTTN-208ENST00000498223 SUMO1P63165 101 aaKnown RBP8.48□□□□□ -1.05
CTTN-208ENST00000498223 HIST1H1AQ02539 215 aaPredicted RBP8.48□□□□□ -1.05
CTTN-208ENST00000498223 FOXI2Q6ZQN5 318 aa8.48□□□□□ -1.05
CTTN-208ENST00000498223 ZNF680Q8NEM1 530 aa8.48□□□□□ -1.05
CTTN-208ENST00000498223 RXFP4Q8TDU9 374 aa8.48□□□□□ -1.05
CTTN-208ENST00000498223 MRPL53Q96EL3 112 aaKnown RBP8.48□□□□□ -1.05
CTTN-208ENST00000498223 CITED4Q96RK1 184 aa8.48□□□□□ -1.05
CTTN-208ENST00000498223 SAV1Q9H4B6 383 aaPredicted RBP8.48□□□□□ -1.05
CTTN-208ENST00000498223 LOC102724200A0A096LPH7 203 aaPredicted RBP8.47□□□□□ -1.05
CTTN-208ENST00000498223 A0A1W2PRE2 83 aa8.47□□□□□ -1.05
CTTN-208ENST00000498223 PAGE4O60829 102 aa8.47□□□□□ -1.05
CTTN-208ENST00000498223 DUSP14O95147 198 aaKnown RBP8.47□□□□□ -1.05
CTTN-208ENST00000498223 IFNA1P01562 189 aa8.47□□□□□ -1.05
CTTN-208ENST00000498223 GDF5OSQ5U4N7 250 aa8.47□□□□□ -1.05
CTTN-208ENST00000498223 GNG13Q9P2W3 67 aa8.47□□□□□ -1.05
CTTN-208ENST00000498223 TRAV1-1A0A0B4J248 108 aa8.46□□□□□ -1.06
CTTN-208ENST00000498223 A0A0J9YX75 114 aa8.46□□□□□ -1.06
CTTN-208ENST00000498223 RBMY1BA6NDE4 496 aaKnown RBP8.46□□□□□ -1.06
CTTN-208ENST00000498223 RBMY1EA6NEQ0 496 aaKnown RBP8.46□□□□□ -1.06
CTTN-208ENST00000498223 PRAC2D3DTV9 90 aa8.46□□□□□ -1.06
CTTN-208ENST00000498223 RBMY1DP0C7P1 496 aaKnown RBP8.46□□□□□ -1.06
CTTN-208ENST00000498223 FRMD6-AS1P0C7T7 363 aa8.46□□□□□ -1.06
CTTN-208ENST00000498223 HLA-DRB4P13762 266 aa8.46□□□□□ -1.06
CTTN-208ENST00000498223 CCL20P78556 96 aa8.46□□□□□ -1.06
CTTN-208ENST00000498223 OR8A1Q8NGG7 326 aa8.46□□□□□ -1.06
CTTN-208ENST00000498223 SUN5Q8TC36 379 aa8.46□□□□□ -1.06
CTTN-208ENST00000498223 YTHDF2Q9Y5A9 579 aaKnown RBP8.46□□□□□ -1.06
CTTN-208ENST00000498223 HLA-DRB4X5D2U9 266 aa8.46□□□□□ -1.06
CTTN-208ENST00000498223 DNAH3Q8TD57 4116 aa8.45□□□□□ -1.06
CTTN-208ENST00000498223 IGKV2-40A0A087WW87 121 aaPredicted RBP8.45□□□□□ -1.06
CTTN-208ENST00000498223 FAM74A7A6NL05 159 aa8.45□□□□□ -1.06
CTTN-208ENST00000498223 H3BMM0 161 aa8.45□□□□□ -1.06
CTTN-208ENST00000498223 IGKV2D-40P01614 121 aaPredicted RBP8.45□□□□□ -1.06
CTTN-208ENST00000498223 CNN1P51911 297 aaKnown RBP8.45□□□□□ -1.06
CTTN-208ENST00000498223 APOC4P55056 127 aa8.45□□□□□ -1.06
CTTN-208ENST00000498223 FXYD7P58549 80 aa8.45□□□□□ -1.06
CTTN-208ENST00000498223 RAB14P61106 215 aa8.45□□□□□ -1.06
CTTN-208ENST00000498223 NUTF2P61970 127 aaKnown RBP8.45□□□□□ -1.06
CTTN-208ENST00000498223 GNG5P63218 68 aa8.45□□□□□ -1.06
CTTN-208ENST00000498223 TRPT1Q86TN4 253 aaKnown RBP8.45□□□□□ -1.06
CTTN-208ENST00000498223 C5orf17Q8NAS9 161 aa8.45□□□□□ -1.06
CTTN-208ENST00000498223 PCNPQ8WW12 178 aaKnown RBP8.45□□□□□ -1.06
CTTN-208ENST00000498223 NKX6-2Q9C056 277 aaPredicted RBP8.45□□□□□ -1.06
CTTN-208ENST00000498223 MANBALQ9NQG1 85 aa8.45□□□□□ -1.06
CTTN-208ENST00000498223 A8MZ25 164 aa8.44□□□□□ -1.06
CTTN-208ENST00000498223 DIRC3C9JPN6 131 aa8.44□□□□□ -1.06
CTTN-208ENST00000498223 F6UZH7 168 aa8.44□□□□□ -1.06
CTTN-208ENST00000498223 K7EQM0 130 aa8.44□□□□□ -1.06
CTTN-208ENST00000498223 ATP5G3P48201 142 aa8.44□□□□□ -1.06
CTTN-208ENST00000498223 ERCC8Q13216 396 aa8.44□□□□□ -1.06
CTTN-208ENST00000498223 HAGHQ16775 308 aa8.44□□□□□ -1.06
CTTN-208ENST00000498223 TMEM78Q5T7P6 136 aa8.44□□□□□ -1.06
CTTN-208ENST00000498223 GOLT1AQ6ZVE7 132 aa8.44□□□□□ -1.06
CTTN-208ENST00000498223 ASCL2Q99929 193 aa8.44□□□□□ -1.06
CTTN-208ENST00000498223 EPDR1Q9UM22 224 aa8.44□□□□□ -1.06
CTTN-208ENST00000498223 GGTLC3B5MD39 225 aa8.43□□□□□ -1.06
CTTN-208ENST00000498223 CA1P00915 261 aaPredicted RBP8.43□□□□□ -1.06
CTTN-208ENST00000498223 MORN3Q6PF18 240 aaPredicted RBP8.43□□□□□ -1.06
CTTN-208ENST00000498223 ZNF767PQ75MW2 155 aa8.43□□□□□ -1.06
CTTN-208ENST00000498223 CSTL1Q9H114 145 aa8.43□□□□□ -1.06
CTTN-208ENST00000498223 ARL2-SNX15V9GYD0 113 aa8.43□□□□□ -1.06
CTTN-208ENST00000498223 KIR2DL5BA0A0G2JN68 375 aa8.42□□□□□ -1.06
CTTN-208ENST00000498223 KIR2DL5BA0A0G2JPC4 375 aa8.42□□□□□ -1.06
CTTN-208ENST00000498223 C11orf94C9JXX5 98 aa8.42□□□□□ -1.06
CTTN-208ENST00000498223 NPIPB6E9PJ23 425 aa8.42□□□□□ -1.06
CTTN-208ENST00000498223 J3KRW8 73 aa8.42□□□□□ -1.06
CTTN-208ENST00000498223 TCRAP04437 139 aa8.42□□□□□ -1.06
CTTN-208ENST00000498223 KIR2DL5AQ8N109 375 aa8.42□□□□□ -1.06
CTTN-208ENST00000498223 ARL6IP6Q8N6S5 226 aa8.42□□□□□ -1.06
CTTN-208ENST00000498223 KIR2DL5BQ8NHK3 375 aa8.42□□□□□ -1.06
CTTN-208ENST00000498223 LINC00477Q96M19 166 aa8.42□□□□□ -1.06
CTTN-208ENST00000498223 VGLL1Q99990 258 aa8.42□□□□□ -1.06
CTTN-208ENST00000498223 AGPAT4-IT1Q9H0P7 198 aa8.42□□□□□ -1.06
CTTN-208ENST00000498223 SLC35B3Q9H1N7 401 aa8.42□□□□□ -1.06
CTTN-208ENST00000498223 XCL2Q9UBD3 114 aa8.42□□□□□ -1.06
CTTN-208ENST00000498223 SERTM2A0A1B0GWG4 89 aa8.41□□□□□ -1.06
CTTN-208ENST00000498223 RBAKDNA6NC62 111 aa8.41□□□□□ -1.06
CTTN-208ENST00000498223 M0R2Z0 102 aa8.41□□□□□ -1.06
CTTN-208ENST00000498223 PEX7O00628 323 aa8.41□□□□□ -1.06
CTTN-208ENST00000498223 UBE2CO00762 179 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms