RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 F6UB75 175 aa11.73□□□□□ -0.53
SSBP1-214ENST00000498107 SPRY2O43597 315 aa11.73□□□□□ -0.53
SSBP1-214ENST00000498107 NDUFB4O95168 129 aa11.73□□□□□ -0.53
SSBP1-214ENST00000498107 HLA-DMBP28068 263 aa11.73□□□□□ -0.53
SSBP1-214ENST00000498107 DEFB1P60022 68 aa11.73□□□□□ -0.53
SSBP1-214ENST00000498107 CD300CQ08708 224 aa11.73□□□□□ -0.53
SSBP1-214ENST00000498107 DEFB135Q30KP9 77 aa11.73□□□□□ -0.53
SSBP1-214ENST00000498107 FAM74A1Q5RGS3 127 aa11.73□□□□□ -0.53
SSBP1-214ENST00000498107 SLC51BQ86UW2 128 aa11.73□□□□□ -0.53
SSBP1-214ENST00000498107 OR10J6PQ8NGY7 276 aa11.73□□□□□ -0.53
SSBP1-214ENST00000498107 RNF183Q96D59 192 aa11.73□□□□□ -0.53
SSBP1-214ENST00000498107 DNAH9Q9NYC9 4486 aa11.72□□□□□ -0.53
SSBP1-214ENST00000498107 HMGB3O15347 200 aaKnown RBP11.72□□□□□ -0.53
SSBP1-214ENST00000498107 IGKV3-20P01619 116 aa11.72□□□□□ -0.53
SSBP1-214ENST00000498107 ARL14EPLP0DKL9 152 aa11.72□□□□□ -0.53
SSBP1-214ENST00000498107 CSN1S1P47710 185 aa11.72□□□□□ -0.53
SSBP1-214ENST00000498107 CNN1P51911 297 aaKnown RBP11.72□□□□□ -0.53
SSBP1-214ENST00000498107 HIST1H1AQ02539 215 aaPredicted RBP11.72□□□□□ -0.53
SSBP1-214ENST00000498107 DPPA3Q6W0C5 159 aa11.72□□□□□ -0.53
SSBP1-214ENST00000498107 TMEM167BQ9NRX6 74 aa11.72□□□□□ -0.53
SSBP1-214ENST00000498107 PPP1R14DQ9NXH3 145 aa11.72□□□□□ -0.53
SSBP1-214ENST00000498107 A8MTW9 85 aa11.71□□□□□ -0.53
SSBP1-214ENST00000498107 ZNF705FA8MVS1 300 aaPredicted RBP11.71□□□□□ -0.53
SSBP1-214ENST00000498107 AMBPP02760 352 aa11.71□□□□□ -0.53
SSBP1-214ENST00000498107 RANP62826 216 aaKnown RBP11.71□□□□□ -0.53
SSBP1-214ENST00000498107 ICAM4Q14773 271 aa11.71□□□□□ -0.53
SSBP1-214ENST00000498107 EXOC3-AS1Q8N2X6 119 aa11.71□□□□□ -0.53
SSBP1-214ENST00000498107 C9orf62Q8N4C0 152 aa11.71□□□□□ -0.53
SSBP1-214ENST00000498107 PHYHIPLQ96FC7 376 aa11.71□□□□□ -0.53
SSBP1-214ENST00000498107 OVOL2Q9BRP0 275 aa11.71□□□□□ -0.53
SSBP1-214ENST00000498107 NBEAL2Q6ZNJ1 2754 aa11.71□□□□□ -0.54
SSBP1-214ENST00000498107 EIF3GO75821 320 aaKnown RBP eCLIP11.7□□□□□ -0.547e-6■□□□□ 9.1
SSBP1-214ENST00000498107 GCHFRP30047 84 aa11.7□□□□□ -0.54
SSBP1-214ENST00000498107 RXFP4Q8TDU9 374 aa11.7□□□□□ -0.54
SSBP1-214ENST00000498107 Q9H3A6 140 aa11.7□□□□□ -0.54
SSBP1-214ENST00000498107 RETNQ9HD89 108 aa11.7□□□□□ -0.54
SSBP1-214ENST00000498107 OTORQ9NRC9 128 aa11.7□□□□□ -0.54
SSBP1-214ENST00000498107 COL7A1Q02388 2944 aa11.7□□□□□ -0.54
SSBP1-214ENST00000498107 M0R3E3 92 aa11.69□□□□□ -0.54
SSBP1-214ENST00000498107 ZNF705DP0CH99 300 aaPredicted RBP11.69□□□□□ -0.54
SSBP1-214ENST00000498107 ZNF705BP0CI00 300 aaPredicted RBP11.69□□□□□ -0.54
SSBP1-214ENST00000498107 RAB5CP51148 216 aa11.69□□□□□ -0.54
SSBP1-214ENST00000498107 ARL6IP6Q8N6S5 226 aa11.69□□□□□ -0.54
SSBP1-214ENST00000498107 CMTM2Q8TAZ6 248 aa11.69□□□□□ -0.54
SSBP1-214ENST00000498107 SUN5Q8TC36 379 aa11.69□□□□□ -0.54
SSBP1-214ENST00000498107 TMED6Q8WW62 240 aa11.69□□□□□ -0.54
SSBP1-214ENST00000498107 MAP1LC3B2A6NCE7 125 aa11.68□□□□□ -0.54
SSBP1-214ENST00000498107 GIG44P09565 113 aaPredicted RBP11.68□□□□□ -0.54
SSBP1-214ENST00000498107 TSPOP30536 169 aa11.68□□□□□ -0.54
SSBP1-214ENST00000498107 ZNF726P1Q15940 193 aa11.68□□□□□ -0.54
SSBP1-214ENST00000498107 IQCF2Q8IXL9 164 aa11.68□□□□□ -0.54
SSBP1-214ENST00000498107 RARRES2Q99969 163 aa11.68□□□□□ -0.54
SSBP1-214ENST00000498107 MAP1LC3BQ9GZQ8 125 aa11.68□□□□□ -0.54
SSBP1-214ENST00000498107 XCL2Q9UBD3 114 aa11.68□□□□□ -0.54
SSBP1-214ENST00000498107 PGPA6NDG6 321 aa11.67□□□□□ -0.54
SSBP1-214ENST00000498107 PRAC2D3DTV9 90 aa11.67□□□□□ -0.54
SSBP1-214ENST00000498107 BOLA2-SMG1P6H3BVE0 249 aa11.67□□□□□ -0.54
SSBP1-214ENST00000498107 AMTNQ6UX39 209 aa11.67□□□□□ -0.54
SSBP1-214ENST00000498107 SSX7Q7RTT5 188 aa11.67□□□□□ -0.54
SSBP1-214ENST00000498107 FAM213BQ8TBF2 198 aa11.67□□□□□ -0.54
SSBP1-214ENST00000498107 LINC00477Q96M19 166 aa11.67□□□□□ -0.54
SSBP1-214ENST00000498107 ODF3Q96PU9 254 aa11.67□□□□□ -0.54
SSBP1-214ENST00000498107 SLC35B3Q9H1N7 401 aa11.67□□□□□ -0.54
SSBP1-214ENST00000498107 STAB2Q8WWQ8 2551 aa11.67□□□□□ -0.54
SSBP1-214ENST00000498107 RBAKDNA6NC62 111 aa11.66□□□□□ -0.54
SSBP1-214ENST00000498107 NPIPB6E9PJ23 425 aa11.66□□□□□ -0.54
SSBP1-214ENST00000498107 FXYD7P58549 80 aa11.66□□□□□ -0.54
SSBP1-214ENST00000498107 CSNK1G2-AS1Q8NCQ2 148 aa11.66□□□□□ -0.54
SSBP1-214ENST00000498107 OR11H2Q8NH07 326 aa11.66□□□□□ -0.54
SSBP1-214ENST00000498107 NKX6-2Q9C056 277 aaPredicted RBP11.66□□□□□ -0.54
SSBP1-214ENST00000498107 TENM3Q9P273 2699 aa11.66□□□□□ -0.54
SSBP1-214ENST00000498107 A0A1W2PRE2 83 aa11.65□□□□□ -0.54
SSBP1-214ENST00000498107 INSP01308 110 aa11.65□□□□□ -0.54
SSBP1-214ENST00000498107 SLC25A5P05141 298 aaKnown RBP11.65□□□□□ -0.54
SSBP1-214ENST00000498107 LEPP41159 167 aa11.65□□□□□ -0.54
SSBP1-214ENST00000498107 CDKN1BP46527 198 aa11.65□□□□□ -0.54
SSBP1-214ENST00000498107 TMEM78Q5T7P6 136 aa11.65□□□□□ -0.54
SSBP1-214ENST00000498107 C9orf47Q6ZRZ4 202 aa11.65□□□□□ -0.54
SSBP1-214ENST00000498107 SFT2D1Q8WV19 159 aa11.65□□□□□ -0.54
SSBP1-214ENST00000498107 MBD3L1Q8WWY6 194 aa11.65□□□□□ -0.54
SSBP1-214ENST00000498107 IGF2BP2-AS1Q96M15 143 aa11.65□□□□□ -0.54
SSBP1-214ENST00000498107 WWC2-AS2Q96NR7 200 aa11.65□□□□□ -0.54
SSBP1-214ENST00000498107 GOLT1BQ9Y3E0 138 aa11.65□□□□□ -0.54
SSBP1-214ENST00000498107 SERTM2A0A1B0GWG4 89 aa11.64□□□□□ -0.55
SSBP1-214ENST00000498107 DIRC3C9JPN6 131 aa11.64□□□□□ -0.55
SSBP1-214ENST00000498107 TEX46H3BTG2 121 aa11.64□□□□□ -0.55
SSBP1-214ENST00000498107 H2AFB1P0C5Y9 115 aa11.64□□□□□ -0.55
SSBP1-214ENST00000498107 FHITP49789 147 aa11.64□□□□□ -0.55
SSBP1-214ENST00000498107 SULT1A2P50226 295 aa11.64□□□□□ -0.55
SSBP1-214ENST00000498107 FGF8P55075 233 aaPredicted RBP11.64□□□□□ -0.55
SSBP1-214ENST00000498107 SPINK13Q1W4C9 94 aa11.64□□□□□ -0.55
SSBP1-214ENST00000498107 C5orf17Q8NAS9 161 aa11.64□□□□□ -0.55
SSBP1-214ENST00000498107 PLA2G2EQ9NZK7 142 aa11.64□□□□□ -0.55
SSBP1-214ENST00000498107 HUWE1Q7Z6Z7 4374 aaKnown RBP11.63□□□□□ -0.55
SSBP1-214ENST00000498107 ZNF705EA8MWA4 302 aaPredicted RBP11.63□□□□□ -0.55
SSBP1-214ENST00000498107 K7EQM0 130 aa11.63□□□□□ -0.55
SSBP1-214ENST00000498107 M0R2Z0 102 aa11.63□□□□□ -0.55
SSBP1-214ENST00000498107 MIFP14174 115 aa11.63□□□□□ -0.55
SSBP1-214ENST00000498107 PPT1P50897 306 aa11.63□□□□□ -0.55
SSBP1-214ENST00000498107 NKX2-5P52952 324 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms