RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 TRBV20-1A0A075B6N2 111 aa10.23□□□□□ -0.77
VEGFA-215ENST00000497139 M0QXV9 152 aa10.23□□□□□ -0.77
VEGFA-215ENST00000497139 CEACAM4O75871 244 aa10.23□□□□□ -0.77
VEGFA-215ENST00000497139 IGLV2-23P01705 113 aa10.23□□□□□ -0.77
VEGFA-215ENST00000497139 Q71RC1 249 aaPredicted RBP10.23□□□□□ -0.77
VEGFA-215ENST00000497139 Q8N8P6 123 aa10.23□□□□□ -0.77
VEGFA-215ENST00000497139 HES7Q9BYE0 225 aa10.23□□□□□ -0.77
VEGFA-215ENST00000497139 FZR1Q9UM11 496 aa10.23□□□□□ -0.77
VEGFA-215ENST00000497139 A0A087WX48 190 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 PRSS29PA6NIE9 313 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 SH2D1AO60880 128 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 IGLV1-44P01699 117 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 RBP4P02753 201 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 CECR9P0C854 216 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 PDE6HQ13956 83 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 MYMXA0A1B0GTQ4 84 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 IGLC6P0CF74 106 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 ASIPP42127 132 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 UBE2D3P61077 147 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 LYZP61626 148 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 UBE2D2P62837 147 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 C10orf55Q5SWW7 151 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 SHANK2-AS3Q9BTD1 123 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 TMEM160Q9NX00 188 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 DKK4Q9UBT3 224 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 UFC1Q9Y3C8 167 aa10.22□□□□□ -0.77
VEGFA-215ENST00000497139 TRAV40A0A0B4J280 105 aa10.21□□□□□ -0.77
VEGFA-215ENST00000497139 B5MCH6 92 aa10.21□□□□□ -0.77
VEGFA-215ENST00000497139 SMKR1H3BMG3 65 aa10.21□□□□□ -0.77
VEGFA-215ENST00000497139 PPIFP30405 207 aaKnown RBP10.21□□□□□ -0.77
VEGFA-215ENST00000497139 GATA4P43694 442 aa10.21□□□□□ -0.77
VEGFA-215ENST00000497139 MYOZ3Q8TDC0 251 aa10.21□□□□□ -0.77
VEGFA-215ENST00000497139 RNF185Q96GF1 192 aa10.21□□□□□ -0.77
VEGFA-215ENST00000497139 RHODO00212 210 aa10.21□□□□□ -0.78
VEGFA-215ENST00000497139 TNFRSF6BO95407 300 aa10.21□□□□□ -0.78
VEGFA-215ENST00000497139 IGHG4P01861 327 aa10.21□□□□□ -0.78
VEGFA-215ENST00000497139 GLMPQ8WWB7 406 aa10.21□□□□□ -0.78
VEGFA-215ENST00000497139 CARD19Q96LW7 228 aa10.21□□□□□ -0.78
VEGFA-215ENST00000497139 MRPL35Q9NZE8 188 aaKnown RBP10.21□□□□□ -0.78
VEGFA-215ENST00000497139 ZDBF2Q9HCK1 2354 aa10.21□□□□□ -0.78
VEGFA-215ENST00000497139 TRAV12-1A0A0B4J245 112 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 H3BRN7 92 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 K7EMI3 77 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 Q6Q795 121 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 FAM169BQ8N8A8 192 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 C8orf31Q8N9H6 132 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 DOCK7Q96N67 2140 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 GAFA1Q96PS6 74 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 PCNX2A6NKB5 2137 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 GAGE12JA6NER3 117 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 GAGE7O76087 117 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 GAGE12FP0CL80 117 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 GAGE12GP0CL81 117 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 GAGE12IP0CL82 117 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 UBE2D1P51668 147 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 GAGE4Q13068 117 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 SHISA2Q6UWI4 295 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 OR11H6Q8NGC7 330 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 C8orf49Q96NF6 230 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 KNTC1P50748 2209 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 A8MWV9 139 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 RUSC1-AS1Q66K80 236 aa10.2□□□□□ -0.78
VEGFA-215ENST00000497139 C6orf15Q6UXA7 325 aaPredicted RBP10.2□□□□□ -0.78
VEGFA-215ENST00000497139 NHLRC4P0CG21 123 aaPredicted RBP10.19□□□□□ -0.78
VEGFA-215ENST00000497139 CD40P25942 277 aa10.19□□□□□ -0.78
VEGFA-215ENST00000497139 AAMDCQ9H7C9 122 aa10.19□□□□□ -0.78
VEGFA-215ENST00000497139 RNF7Q9UBF6 113 aa10.19□□□□□ -0.78
VEGFA-215ENST00000497139 DOCK10Q96BY6 2186 aa10.19□□□□□ -0.78
VEGFA-215ENST00000497139 PSMB2P49721 201 aa10.19□□□□□ -0.78
VEGFA-215ENST00000497139 LINC00311Q8N616 119 aa10.19□□□□□ -0.78
VEGFA-215ENST00000497139 IGLV2-18A0A075B6J9 118 aa10.18□□□□□ -0.78
VEGFA-215ENST00000497139 TRGV5A0A0B4J1U4 118 aa10.18□□□□□ -0.78
VEGFA-215ENST00000497139 CFIP05156 583 aa10.18□□□□□ -0.78
VEGFA-215ENST00000497139 PIP4P1Q86T03 277 aa10.18□□□□□ -0.78
VEGFA-215ENST00000497139 RASL11BQ9BPW5 248 aa10.18□□□□□ -0.78
VEGFA-215ENST00000497139 H7C1H1 209 aa10.18□□□□□ -0.78
VEGFA-215ENST00000497139 RPL27AP46776 148 aaKnown RBP10.18□□□□□ -0.78
VEGFA-215ENST00000497139 RPL32P62910 135 aaKnown RBP10.18□□□□□ -0.78
VEGFA-215ENST00000497139 HERV-K104P63124 156 aa10.18□□□□□ -0.78
VEGFA-215ENST00000497139 HCP5Q6MZN7 132 aa10.18□□□□□ -0.78
VEGFA-215ENST00000497139 MAFAQ8NHW3 353 aaPredicted RBP10.18□□□□□ -0.78
VEGFA-215ENST00000497139 TMSB15BA0A087X1C1 80 aa10.17□□□□□ -0.78
VEGFA-215ENST00000497139 F8VRH5 84 aa10.17□□□□□ -0.78
VEGFA-215ENST00000497139 NDUFV3P56181 108 aaKnown RBP10.17□□□□□ -0.78
VEGFA-215ENST00000497139 MRGPRG-AS1Q2M3A8 158 aa10.17□□□□□ -0.78
VEGFA-215ENST00000497139 SPRR3Q9UBC9 169 aa10.17□□□□□ -0.78
VEGFA-215ENST00000497139 MYO15AQ9UKN7 3530 aa10.17□□□□□ -0.78
VEGFA-215ENST00000497139 CENPVL3A0A0U1RRI6 287 aa10.17□□□□□ -0.78
VEGFA-215ENST00000497139 MRPS12O15235 138 aaKnown RBP10.17□□□□□ -0.78
VEGFA-215ENST00000497139 WT1P19544 449 aaPredicted RBP10.17□□□□□ -0.78
VEGFA-215ENST00000497139 GAGE2BQ13066 116 aa10.17□□□□□ -0.78
VEGFA-215ENST00000497139 LAGE3Q14657 143 aa10.17□□□□□ -0.78
VEGFA-215ENST00000497139 GAGE2EQ4V326 116 aa10.17□□□□□ -0.78
VEGFA-215ENST00000497139 ZNRD1Q9P1U0 126 aa10.17□□□□□ -0.78
VEGFA-215ENST00000497139 GAGE2DQ9UEU5 116 aa10.17□□□□□ -0.78
VEGFA-215ENST00000497139 VPS13AQ96RL7 3174 aa10.16□□□□□ -0.78
VEGFA-215ENST00000497139 IGHV1-18A0A0C4DH31 117 aa10.16□□□□□ -0.78
VEGFA-215ENST00000497139 LINC01549A6NIU2 74 aa10.16□□□□□ -0.78
VEGFA-215ENST00000497139 FBXL15Q9H469 300 aa10.16□□□□□ -0.78
VEGFA-215ENST00000497139 MDS2Q8NDY4 140 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms