RNA–Protein interactions for RNA: ENST00000497065.1

SPEG-223, Transcript of SPEG complex locus, human

TSL 4

Gene SPEG, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPEG-223	ENST00000497065	KIR3DS1	Q14943	382 aa		12.9	□□□□□ -0.34
SPEG-223	ENST00000497065	OR10J6P	Q8NGY7	276 aa		12.9	□□□□□ -0.34
SPEG-223	ENST00000497065	BLNK	Q8WV28	456 aa		12.9	□□□□□ -0.34
SPEG-223	ENST00000497065	LINC01587	Q99440	93 aa		12.9	□□□□□ -0.34
SPEG-223	ENST00000497065	RNF126	Q9BV68	326 aa		12.9	□□□□□ -0.34
SPEG-223	ENST00000497065	SMIM3	Q9BZL3	60 aa		12.9	□□□□□ -0.34
SPEG-223	ENST00000497065	MPDU1	O75352	247 aa		12.89	□□□□□ -0.35
SPEG-223	ENST00000497065	AZU1	P20160	251 aa		12.89	□□□□□ -0.35
SPEG-223	ENST00000497065	MIR17HG	Q75NE6	70 aa		12.89	□□□□□ -0.35
SPEG-223	ENST00000497065	SAT2	Q96F10	170 aa	Predicted RBP	12.89	□□□□□ -0.35
SPEG-223	ENST00000497065	MBD2	Q9UBB5	411 aa		12.89	□□□□□ -0.35
SPEG-223	ENST00000497065	BIRC6	Q9NR09	4857 aa		12.88	□□□□□ -0.35
SPEG-223	ENST00000497065	TEX48	A0A1B0GUV7	120 aa		12.88	□□□□□ -0.35
SPEG-223	ENST00000497065		M0R3E3	92 aa		12.88	□□□□□ -0.35
SPEG-223	ENST00000497065	DAD1	P61803	113 aa		12.88	□□□□□ -0.35
SPEG-223	ENST00000497065	SLC25A2	Q9BXI2	301 aa		12.88	□□□□□ -0.35
SPEG-223	ENST00000497065	MPC2	O95563	127 aa		12.87	□□□□□ -0.35
SPEG-223	ENST00000497065	DEFB130B	P0DP73	79 aa		12.87	□□□□□ -0.35
SPEG-223	ENST00000497065	DEFB130A	P0DP74	79 aa		12.87	□□□□□ -0.35
SPEG-223	ENST00000497065	CDKN1B	P46527	198 aa		12.87	□□□□□ -0.35
SPEG-223	ENST00000497065	GUK1	Q16774	197 aa		12.87	□□□□□ -0.35
SPEG-223	ENST00000497065	CHAC2	Q8WUX2	184 aa		12.87	□□□□□ -0.35
SPEG-223	ENST00000497065	ATP5S	Q99766	215 aa		12.87	□□□□□ -0.35
SPEG-223	ENST00000497065	NDUFAF3	Q9BU61	184 aa		12.87	□□□□□ -0.35
SPEG-223	ENST00000497065	WDR61	Q9GZS3	305 aa	Known RBP	12.87	□□□□□ -0.35
SPEG-223	ENST00000497065	ALG5	Q9Y673	324 aa		12.87	□□□□□ -0.35
SPEG-223	ENST00000497065	TRBV19	A0A075B6N1	114 aa		12.86	□□□□□ -0.35
SPEG-223	ENST00000497065	PET100	P0DJ07	73 aa		12.86	□□□□□ -0.35
SPEG-223	ENST00000497065	FCN2	Q15485	313 aa		12.86	□□□□□ -0.35
SPEG-223	ENST00000497065	GFI1B	Q5VTD9	330 aa		12.86	□□□□□ -0.35
SPEG-223	ENST00000497065	EXOC3-AS1	Q8N2X6	119 aa		12.86	□□□□□ -0.35
SPEG-223	ENST00000497065	HSPB11	Q9Y547	144 aa		12.86	□□□□□ -0.35
SPEG-223	ENST00000497065	TIMM9	Q9Y5J7	89 aa		12.86	□□□□□ -0.35
SPEG-223	ENST00000497065	NDUFB4	O95168	129 aa		12.85	□□□□□ -0.35
SPEG-223	ENST00000497065	OR10J4	P0C629	311 aa		12.85	□□□□□ -0.35
SPEG-223	ENST00000497065	ERCC8	Q13216	396 aa		12.85	□□□□□ -0.35
SPEG-223	ENST00000497065	KCNIP2	Q9NS61	270 aa		12.85	□□□□□ -0.35
SPEG-223	ENST00000497065	TMEM14C	Q9P0S9	112 aa		12.85	□□□□□ -0.35
SPEG-223	ENST00000497065	KMT2A	Q03164	3969 aa		12.85	□□□□□ -0.35
SPEG-223	ENST00000497065	PLAC8L1	A1L4L8	177 aa		12.84	□□□□□ -0.35
SPEG-223	ENST00000497065	EIF3G	O75821	320 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
SPEG-223	ENST00000497065	CT45A10	P0DMU9	189 aa		12.84	□□□□□ -0.35
SPEG-223	ENST00000497065	HIST1H1E	P10412	219 aa	Known RBP	12.84	□□□□□ -0.35
SPEG-223	ENST00000497065	RPL12	P30050	165 aa	Known RBP	12.84	□□□□□ -0.35
SPEG-223	ENST00000497065	TAS2R60	P59551	318 aa		12.84	□□□□□ -0.35
SPEG-223	ENST00000497065	FAM167A-AS1	Q96KT0	104 aa		12.84	□□□□□ -0.35
SPEG-223	ENST00000497065	NPIPB6	E9PJ23	425 aa		12.83	□□□□□ -0.36
SPEG-223	ENST00000497065	C17orf112	F2Z3M2	114 aa		12.83	□□□□□ -0.36
SPEG-223	ENST00000497065	ZNF253	O75346	499 aa		12.83	□□□□□ -0.36
SPEG-223	ENST00000497065	TSPO	P30536	169 aa		12.83	□□□□□ -0.36
SPEG-223	ENST00000497065	FFAR4	Q5NUL3	377 aa		12.83	□□□□□ -0.36
SPEG-223	ENST00000497065	FAM122C	Q6P4D5	195 aa		12.83	□□□□□ -0.36
SPEG-223	ENST00000497065	TMEM88	Q6PEY1	159 aa		12.83	□□□□□ -0.36
SPEG-223	ENST00000497065	TMEM256	Q8N2U0	113 aa		12.83	□□□□□ -0.36
SPEG-223	ENST00000497065	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	12.82	□□□□□ -0.36
SPEG-223	ENST00000497065	TRAV12-3	A0A0B4J271	114 aa		12.82	□□□□□ -0.36
SPEG-223	ENST00000497065	OR7C2	O60412	319 aa		12.82	□□□□□ -0.36
SPEG-223	ENST00000497065	IGKV2D-40	P01614	121 aa	Predicted RBP	12.82	□□□□□ -0.36
SPEG-223	ENST00000497065	LEP	P41159	167 aa		12.82	□□□□□ -0.36
SPEG-223	ENST00000497065	ICAM4	Q14773	271 aa		12.82	□□□□□ -0.36
SPEG-223	ENST00000497065	AAMDC	Q9H7C9	122 aa		12.82	□□□□□ -0.36
SPEG-223	ENST00000497065	PTTG1	O95997	202 aa		12.81	□□□□□ -0.36
SPEG-223	ENST00000497065	IFNA5	P01569	189 aa		12.81	□□□□□ -0.36
SPEG-223	ENST00000497065	UBE2DNL	Q8IWF7	75 aa		12.81	□□□□□ -0.36
SPEG-223	ENST00000497065	SCGB1C1	Q8TD33	95 aa		12.81	□□□□□ -0.36
SPEG-223	ENST00000497065	PHYHIPL	Q96FC7	376 aa		12.81	□□□□□ -0.36
SPEG-223	ENST00000497065	C16orf74	Q96GX8	76 aa		12.81	□□□□□ -0.36
SPEG-223	ENST00000497065	PAXX	Q9BUH6	204 aa		12.81	□□□□□ -0.36
SPEG-223	ENST00000497065	MRPL32	Q9BYC8	188 aa	Known RBP	12.81	□□□□□ -0.36
SPEG-223	ENST00000497065	OR51M1	Q9H341	326 aa		12.81	□□□□□ -0.36
SPEG-223	ENST00000497065	WFDC1	Q9HC57	220 aa		12.81	□□□□□ -0.36
SPEG-223	ENST00000497065	NOP10	Q9NPE3	64 aa	Known RBP	12.81	□□□□□ -0.36
SPEG-223	ENST00000497065	FUT9	Q9Y231	359 aa		12.81	□□□□□ -0.36
SPEG-223	ENST00000497065	LYRM9	A8MSI8	78 aa		12.8	□□□□□ -0.36
SPEG-223	ENST00000497065		H7BYZ3	331 aa		12.8	□□□□□ -0.36
SPEG-223	ENST00000497065	OXA1L	Q15070	435 aa		12.8	□□□□□ -0.36
SPEG-223	ENST00000497065	RNASE8	Q8TDE3	154 aa	Known RBP	12.8	□□□□□ -0.36
SPEG-223	ENST00000497065	MRPL53	Q96EL3	112 aa	Known RBP	12.8	□□□□□ -0.36
SPEG-223	ENST00000497065	VPS13D	Q5THJ4	4388 aa		12.8	□□□□□ -0.36
SPEG-223	ENST00000497065		F5H768	121 aa		12.79	□□□□□ -0.36
SPEG-223	ENST00000497065	NBEAP1	P0C6P0	100 aa		12.79	□□□□□ -0.36
SPEG-223	ENST00000497065		P0DMU3	169 aa		12.79	□□□□□ -0.36
SPEG-223	ENST00000497065	FAM231A	P0DMU4	169 aa		12.79	□□□□□ -0.36
SPEG-223	ENST00000497065	FAM231C	P0DMU5	169 aa		12.79	□□□□□ -0.36
SPEG-223	ENST00000497065	UBE2L3	P68036	154 aa	Known RBP	12.79	□□□□□ -0.36
SPEG-223	ENST00000497065	BTN1A1	Q13410	526 aa		12.79	□□□□□ -0.36
SPEG-223	ENST00000497065	PDE6H	Q13956	83 aa		12.79	□□□□□ -0.36
SPEG-223	ENST00000497065	TMEM263	Q8WUH6	116 aa	Known RBP	12.79	□□□□□ -0.36
SPEG-223	ENST00000497065	RNF141	Q8WVD5	230 aa		12.79	□□□□□ -0.36
SPEG-223	ENST00000497065	FXYD5	Q96DB9	178 aa		12.79	□□□□□ -0.36
SPEG-223	ENST00000497065		M0R2N4	97 aa		12.78	□□□□□ -0.36
SPEG-223	ENST00000497065	VGLL1	Q99990	258 aa		12.78	□□□□□ -0.36
SPEG-223	ENST00000497065	AGPAT4-IT1	Q9H0P7	198 aa		12.78	□□□□□ -0.36
SPEG-223	ENST00000497065	MED28	Q9H204	178 aa		12.78	□□□□□ -0.36
SPEG-223	ENST00000497065	PRELID1	Q9Y255	219 aa		12.78	□□□□□ -0.36
SPEG-223	ENST00000497065	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	12.78	□□□□□ -0.36
SPEG-223	ENST00000497065	IGLV2-18	A0A075B6J9	118 aa		12.77	□□□□□ -0.37
SPEG-223	ENST00000497065	CD300C	Q08708	224 aa		12.77	□□□□□ -0.37
SPEG-223	ENST00000497065	CCDC28A	Q8IWP9	274 aa		12.77	□□□□□ -0.37
SPEG-223	ENST00000497065	POM121L12	Q8N7R1	296 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms