RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 C11orf44Q8N8P7 122 aa13□□□□□ -0.33
LMNA-216ENST00000496738 SHANK2-AS3Q9BTD1 123 aa13□□□□□ -0.33
LMNA-216ENST00000496738 URGCP-MRPS24S4R325 110 aa13□□□□□ -0.33
LMNA-216ENST00000496738 IGHV3-49A0A0A0MS15 119 aa12.99□□□□□ -0.33
LMNA-216ENST00000496738 ATP5G3P48201 142 aa12.99□□□□□ -0.33
LMNA-216ENST00000496738 TCTEX1D4Q5JR98 221 aa12.99□□□□□ -0.33
LMNA-216ENST00000496738 C18orf65Q6ZTR6 163 aa12.99□□□□□ -0.33
LMNA-216ENST00000496738 MANBALQ9NQG1 85 aa12.99□□□□□ -0.33
LMNA-216ENST00000496738 CLEC5AQ9NY25 188 aa12.99□□□□□ -0.33
LMNA-216ENST00000496738 PEF1Q9UBV8 284 aaKnown RBP12.99□□□□□ -0.33
LMNA-216ENST00000496738 RABAC1Q9UI14 185 aa12.99□□□□□ -0.33
LMNA-216ENST00000496738 YTHDF2Q9Y5A9 579 aaKnown RBP12.99□□□□□ -0.33
LMNA-216ENST00000496738 IGHV3OR16-13A0A075B7E8 117 aa12.99□□□□□ -0.33
LMNA-216ENST00000496738 IGHV3-74A0A0B4J1X5 117 aa12.99□□□□□ -0.33
LMNA-216ENST00000496738 HAX1O00165 279 aa12.99□□□□□ -0.33
LMNA-216ENST00000496738 OCIAD2Q56VL3 154 aa12.99□□□□□ -0.33
LMNA-216ENST00000496738 UNQ9165/PRO28630Q6UXU0 137 aa12.99□□□□□ -0.33
LMNA-216ENST00000496738 LINC01006Q8NI28 216 aa12.99□□□□□ -0.33
LMNA-216ENST00000496738 IGHV3-66A0A0C4DH42 116 aa12.98□□□□□ -0.33
LMNA-216ENST00000496738 RPL15P61313 204 aaKnown RBP12.98□□□□□ -0.33
LMNA-216ENST00000496738 BLNKQ8WV28 456 aa12.98□□□□□ -0.33
LMNA-216ENST00000496738 ATP6V0BQ99437 205 aa12.98□□□□□ -0.33
LMNA-216ENST00000496738 NF1P21359 2839 aa12.98□□□□□ -0.33
LMNA-216ENST00000496738 F6UZH7 168 aa12.98□□□□□ -0.33
LMNA-216ENST00000496738 MEF2BQ02080 365 aaPredicted RBP12.98□□□□□ -0.33
LMNA-216ENST00000496738 OR4F5Q8NH21 305 aa12.98□□□□□ -0.33
LMNA-216ENST00000496738 MYOZ3Q8TDC0 251 aa12.98□□□□□ -0.33
LMNA-216ENST00000496738 FXYD5Q96DB9 178 aa12.98□□□□□ -0.33
LMNA-216ENST00000496738 OR4F4Q96R69 305 aa12.98□□□□□ -0.33
LMNA-216ENST00000496738 F8P00451 2351 aa12.97□□□□□ -0.33
LMNA-216ENST00000496738 CLPSL1A2RUU4 121 aa12.97□□□□□ -0.33
LMNA-216ENST00000496738 C11orf94C9JXX5 98 aa12.97□□□□□ -0.33
LMNA-216ENST00000496738 GP9P14770 177 aa12.97□□□□□ -0.33
LMNA-216ENST00000496738 TMEM18Q96B42 140 aa12.97□□□□□ -0.33
LMNA-216ENST00000496738 ZNF320A2RRD8 509 aa12.97□□□□□ -0.33
LMNA-216ENST00000496738 PMS2P11Q13670 270 aa12.97□□□□□ -0.33
LMNA-216ENST00000496738 RNF152Q8N8N0 203 aa12.97□□□□□ -0.33
LMNA-216ENST00000496738 TMEM167BQ9NRX6 74 aa12.97□□□□□ -0.33
LMNA-216ENST00000496738 APOHP02749 345 aaPredicted RBP12.96□□□□□ -0.33
LMNA-216ENST00000496738 LGALS1P09382 135 aaKnown RBP12.96□□□□□ -0.33
LMNA-216ENST00000496738 DEFB136Q30KP8 78 aa12.96□□□□□ -0.33
LMNA-216ENST00000496738 RPUSD4Q96CM3 377 aaKnown RBP12.96□□□□□ -0.33
LMNA-216ENST00000496738 UBE2E2Q96LR5 201 aa12.96□□□□□ -0.33
LMNA-216ENST00000496738 C16orf95Q9H693 158 aa12.96□□□□□ -0.34
LMNA-216ENST00000496738 RPS20P60866 119 aaKnown RBP12.95□□□□□ -0.34
LMNA-216ENST00000496738 OR4C5Q8NGB2 326 aa12.95□□□□□ -0.34
LMNA-216ENST00000496738 IGHV4OR15-8A0A075B7B6 117 aa12.94□□□□□ -0.34
LMNA-216ENST00000496738 A0A087WW49 117 aa12.94□□□□□ -0.34
LMNA-216ENST00000496738 H3BQ15 152 aa12.94□□□□□ -0.34
LMNA-216ENST00000496738 NDUFA4O00483 81 aa12.94□□□□□ -0.34
LMNA-216ENST00000496738 CD28P10747 220 aa12.94□□□□□ -0.34
LMNA-216ENST00000496738 STXBP6Q8NFX7 210 aa12.94□□□□□ -0.34
LMNA-216ENST00000496738 CST9LQ9H4G1 147 aa12.94□□□□□ -0.34
LMNA-216ENST00000496738 NAGKQ9UJ70 344 aa12.94□□□□□ -0.34
LMNA-216ENST00000496738 SCGB1D1O95968 90 aa12.94□□□□□ -0.34
LMNA-216ENST00000496738 DUX3Q96PT4 197 aa12.94□□□□□ -0.34
LMNA-216ENST00000496738 METTL26Q96S19 204 aa12.94□□□□□ -0.34
LMNA-216ENST00000496738 A0A1W2PRX2 142 aa12.93□□□□□ -0.34
LMNA-216ENST00000496738 RANP62826 216 aaKnown RBP12.93□□□□□ -0.34
LMNA-216ENST00000496738 RPEL1Q2QD12 228 aa12.93□□□□□ -0.34
LMNA-216ENST00000496738 FAM90A2PQ658T7 463 aa12.93□□□□□ -0.34
LMNA-216ENST00000496738 BPIFA4PQ86YQ2 179 aa12.93□□□□□ -0.34
LMNA-216ENST00000496738 C17orf77Q96MU5 243 aa12.93□□□□□ -0.34
LMNA-216ENST00000496738 SELENOKQ9Y6D0 94 aa12.93□□□□□ -0.34
LMNA-216ENST00000496738 GGTLC3B5MD39 225 aa12.93□□□□□ -0.34
LMNA-216ENST00000496738 EDN2P20800 178 aa12.93□□□□□ -0.34
LMNA-216ENST00000496738 NPPCP23582 126 aa12.93□□□□□ -0.34
LMNA-216ENST00000496738 OR8I2Q8N0Y5 310 aa12.93□□□□□ -0.34
LMNA-216ENST00000496738 WIPF2Q8TF74 440 aaPredicted RBP12.93□□□□□ -0.34
LMNA-216ENST00000496738 ZNF586Q9NXT0 402 aa12.93□□□□□ -0.34
LMNA-216ENST00000496738 RNF114Q9Y508 228 aa12.93□□□□□ -0.34
LMNA-216ENST00000496738 STPG4Q8N801 248 aa12.92□□□□□ -0.34
LMNA-216ENST00000496738 KLHL30-AS1Q8NEE0 82 aa12.92□□□□□ -0.34
LMNA-216ENST00000496738 TMEM14CQ9P0S9 112 aa12.92□□□□□ -0.34
LMNA-216ENST00000496738 TRBV24-1A0A075B6N3 115 aa12.92□□□□□ -0.34
LMNA-216ENST00000496738 NDUFA7O95182 113 aa12.92□□□□□ -0.34
LMNA-216ENST00000496738 TM4SF20Q53R12 229 aa12.92□□□□□ -0.34
LMNA-216ENST00000496738 ZNF738Q8NE65 137 aa12.92□□□□□ -0.34
LMNA-216ENST00000496738 OR4F17Q8NGA8 305 aa12.92□□□□□ -0.34
LMNA-216ENST00000496738 TMEM190Q8WZ59 177 aa12.92□□□□□ -0.34
LMNA-216ENST00000496738 NIPSNAP3BQ9BS92 247 aa12.92□□□□□ -0.34
LMNA-216ENST00000496738 COX11Q9Y6N1 276 aa12.92□□□□□ -0.34
LMNA-216ENST00000496738 SCO2A0A1W2PP80 73 aa12.91□□□□□ -0.34
LMNA-216ENST00000496738 XKRY2A2RUG3 117 aa12.91□□□□□ -0.34
LMNA-216ENST00000496738 MRPS12O15235 138 aaKnown RBP12.91□□□□□ -0.34
LMNA-216ENST00000496738 PRB4P10163 310 aaPredicted RBP12.91□□□□□ -0.34
LMNA-216ENST00000496738 SUMO1P63165 101 aaKnown RBP12.91□□□□□ -0.34
LMNA-216ENST00000496738 SMPXQ9UHP9 88 aa12.91□□□□□ -0.34
LMNA-216ENST00000496738 BUB3O43684 328 aa12.91□□□□□ -0.34
LMNA-216ENST00000496738 CRYBB3P26998 211 aa12.91□□□□□ -0.34
LMNA-216ENST00000496738 IGLC2P0DOY2 106 aa12.9□□□□□ -0.34
LMNA-216ENST00000496738 HIST1H1EP10412 219 aaKnown RBP12.9□□□□□ -0.34
LMNA-216ENST00000496738 C8orf86Q6ZUL3 223 aa12.9□□□□□ -0.34
LMNA-216ENST00000496738 K7ERU9 68 aa12.9□□□□□ -0.34
LMNA-216ENST00000496738 SLC17A3O00476 420 aa12.9□□□□□ -0.34
LMNA-216ENST00000496738 HOXD3P31249 432 aaPredicted RBP12.9□□□□□ -0.34
LMNA-216ENST00000496738 SLURP1P55000 103 aa12.9□□□□□ -0.34
LMNA-216ENST00000496738 SYNJ2BPP57105 145 aa12.9□□□□□ -0.34
LMNA-216ENST00000496738 FAM106AQ4KMX7 169 aa12.9□□□□□ -0.34
LMNA-216ENST00000496738 C4orf3Q8WVX3 66 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms