RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 KIR3DS1Q14943 382 aa6.8□□□□□ -1.32
MSH5-218ENST00000494646 OPCMLQ14982 345 aa6.8□□□□□ -1.32
MSH5-218ENST00000494646 TMEM88Q6PEY1 159 aa6.8□□□□□ -1.32
MSH5-218ENST00000494646 Q6ZRG5 221 aa6.8□□□□□ -1.32
MSH5-218ENST00000494646 BPIFA4PQ86YQ2 179 aa6.8□□□□□ -1.32
MSH5-218ENST00000494646 UBE2DNLQ8IWF7 75 aa6.8□□□□□ -1.32
MSH5-218ENST00000494646 CCDC32Q9BV29 185 aa6.8□□□□□ -1.32
MSH5-218ENST00000494646 ZNF331Q9NQX6 463 aaPredicted RBP6.8□□□□□ -1.32
MSH5-218ENST00000494646 DNAH5Q8TE73 4624 aa6.8□□□□□ -1.32
MSH5-218ENST00000494646 TEX48A0A1B0GUV7 120 aa6.79□□□□□ -1.32
MSH5-218ENST00000494646 IGSF23A1L1A6 192 aa6.79□□□□□ -1.32
MSH5-218ENST00000494646 H3BQ15 152 aa6.79□□□□□ -1.32
MSH5-218ENST00000494646 BOLA2-SMG1P6H3BVE0 249 aa6.79□□□□□ -1.32
MSH5-218ENST00000494646 SLC17A3O00476 420 aa6.79□□□□□ -1.32
MSH5-218ENST00000494646 PVALBP20472 110 aaPredicted RBP6.79□□□□□ -1.32
MSH5-218ENST00000494646 OXA1LQ15070 435 aa6.79□□□□□ -1.32
MSH5-218ENST00000494646 UQCC1Q9NVA1 299 aa6.79□□□□□ -1.32
MSH5-218ENST00000494646 LRP1BQ9NZR2 4599 aa6.78□□□□□ -1.32
MSH5-218ENST00000494646 UBE2L5PA0A1B0GUS4 154 aa6.78□□□□□ -1.32
MSH5-218ENST00000494646 F5H768 121 aa6.78□□□□□ -1.32
MSH5-218ENST00000494646 SCGB1D1O95968 90 aa6.78□□□□□ -1.32
MSH5-218ENST00000494646 S100A11P31949 105 aa6.78□□□□□ -1.32
MSH5-218ENST00000494646 CDKN1BP46527 198 aa6.78□□□□□ -1.32
MSH5-218ENST00000494646 SULT1A1P50225 295 aa6.78□□□□□ -1.32
MSH5-218ENST00000494646 B2MP61769 119 aa6.78□□□□□ -1.32
MSH5-218ENST00000494646 BAXQ07812 192 aa6.78□□□□□ -1.32
MSH5-218ENST00000494646 IL15RAQ13261 267 aa6.78□□□□□ -1.32
MSH5-218ENST00000494646 LCN15Q6UWW0 184 aa6.78□□□□□ -1.32
MSH5-218ENST00000494646 TMEM252Q8N6L7 170 aa6.78□□□□□ -1.32
MSH5-218ENST00000494646 OR1L4Q8NGR5 311 aa6.78□□□□□ -1.32
MSH5-218ENST00000494646 SLC50A1Q9BRV3 221 aa6.78□□□□□ -1.32
MSH5-218ENST00000494646 RNF24Q9Y225 148 aa6.78□□□□□ -1.32
MSH5-218ENST00000494646 WDR83OSQ9Y284 106 aa6.78□□□□□ -1.32
MSH5-218ENST00000494646 RYR1P21817 5038 aa6.77□□□□□ -1.33
MSH5-218ENST00000494646 PLAC8L1A1L4L8 177 aa6.77□□□□□ -1.33
MSH5-218ENST00000494646 LYRM9A8MSI8 78 aa6.77□□□□□ -1.33
MSH5-218ENST00000494646 IGLC2P0DOY2 106 aa6.77□□□□□ -1.33
MSH5-218ENST00000494646 CXCL2P19875 107 aa6.77□□□□□ -1.33
MSH5-218ENST00000494646 FGF7P21781 194 aa6.77□□□□□ -1.33
MSH5-218ENST00000494646 RPL29P47914 159 aaKnown RBP6.77□□□□□ -1.33
MSH5-218ENST00000494646 NHLH2Q02577 135 aa6.77□□□□□ -1.33
MSH5-218ENST00000494646 ATP6V1FQ16864 119 aa6.77□□□□□ -1.33
MSH5-218ENST00000494646 OR10J6PQ8NGY7 276 aa6.77□□□□□ -1.33
MSH5-218ENST00000494646 SAT2Q96F10 170 aaPredicted RBP6.77□□□□□ -1.33
MSH5-218ENST00000494646 FAM210BQ96KR6 192 aa6.77□□□□□ -1.33
MSH5-218ENST00000494646 GPN1Q9HCN4 374 aaPredicted RBP6.77□□□□□ -1.33
MSH5-218ENST00000494646 NOP10Q9NPE3 64 aaKnown RBP6.77□□□□□ -1.33
MSH5-218ENST00000494646 LYRM2Q9NU23 88 aaPredicted RBP6.77□□□□□ -1.33
MSH5-218ENST00000494646 SLC39A9Q9NUM3 307 aa6.77□□□□□ -1.33
MSH5-218ENST00000494646 ZNF586Q9NXT0 402 aa6.77□□□□□ -1.33
MSH5-218ENST00000494646 RTL8CO15255 209 aa6.76□□□□□ -1.33
MSH5-218ENST00000494646 TNFRSF6BO95407 300 aa6.76□□□□□ -1.33
MSH5-218ENST00000494646 NUDT3O95989 172 aa6.76□□□□□ -1.33
MSH5-218ENST00000494646 CT45A10P0DMU9 189 aa6.76□□□□□ -1.33
MSH5-218ENST00000494646 TSPOP30536 169 aa6.76□□□□□ -1.33
MSH5-218ENST00000494646 TAS2R60P59551 318 aa6.76□□□□□ -1.33
MSH5-218ENST00000494646 HBG1P69891 147 aa6.76□□□□□ -1.33
MSH5-218ENST00000494646 HBG2P69892 147 aa6.76□□□□□ -1.33
MSH5-218ENST00000494646 IFITM3Q01628 133 aa6.76□□□□□ -1.33
MSH5-218ENST00000494646 ASAH1Q13510 395 aa6.76□□□□□ -1.33
MSH5-218ENST00000494646 VWC2Q2TAL6 325 aa6.76□□□□□ -1.33
MSH5-218ENST00000494646 GCSAMLQ5JQS6 135 aa6.76□□□□□ -1.33
MSH5-218ENST00000494646 STX12Q86Y82 276 aa6.76□□□□□ -1.33
MSH5-218ENST00000494646 TMEM256Q8N2U0 113 aa6.76□□□□□ -1.33
MSH5-218ENST00000494646 ENKURQ8TC29 256 aa6.76□□□□□ -1.33
MSH5-218ENST00000494646 S100ZQ8WXG8 99 aa6.76□□□□□ -1.33
MSH5-218ENST00000494646 PXMP4Q9Y6I8 212 aa6.76□□□□□ -1.33
MSH5-218ENST00000494646 TRAV12-3A0A0B4J271 114 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 CBY3A6NI87 242 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 PRSS29PA6NIE9 313 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 M0R3E3 92 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 RLN2P04090 185 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 PYYP10082 97 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 ERCC8Q13216 396 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 LGALS9BQ3B8N2 356 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 RNF212Q495C1 297 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 LRRC37A5PQ49AS3 106 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 GFI1BQ5VTD9 330 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 LINC00299Q6ZSB3 139 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 LINC00336Q6ZUF6 198 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 BLNKQ8WV28 456 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 C16orf74Q96GX8 76 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 PFDN5Q99471 154 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 ATG101Q9BSB4 218 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 OR5AC2Q9NZP5 309 aa6.75□□□□□ -1.33
MSH5-218ENST00000494646 TIMM8BQ9Y5J9 83 aaPredicted RBP6.75□□□□□ -1.33
MSH5-218ENST00000494646 INMT-MINDY4F8WBC2 141 aa6.74□□□□□ -1.33
MSH5-218ENST00000494646 H0YIZ8 118 aa6.74□□□□□ -1.33
MSH5-218ENST00000494646 H7BYZ3 331 aa6.74□□□□□ -1.33
MSH5-218ENST00000494646 UPK1BO75841 260 aa6.74□□□□□ -1.33
MSH5-218ENST00000494646 ATP5G1P05496 136 aa6.74□□□□□ -1.33
MSH5-218ENST00000494646 ATP5G3P48201 142 aa6.74□□□□□ -1.33
MSH5-218ENST00000494646 OR5I1Q13606 314 aa6.74□□□□□ -1.33
MSH5-218ENST00000494646 GUK1Q16774 197 aa6.74□□□□□ -1.33
MSH5-218ENST00000494646 CCDC28AQ8IWP9 274 aa6.74□□□□□ -1.33
MSH5-218ENST00000494646 EXOC3-AS1Q8N2X6 119 aa6.74□□□□□ -1.33
MSH5-218ENST00000494646 OR5C1Q8NGR4 320 aa6.74□□□□□ -1.33
MSH5-218ENST00000494646 THAP6Q8TBB0 222 aa6.74□□□□□ -1.33
MSH5-218ENST00000494646 TIMM9Q9Y5J7 89 aa6.74□□□□□ -1.33
MSH5-218ENST00000494646 TRBV19A0A075B6N1 114 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms