RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 FCN2Q15485 313 aa11.07□□□□□ -0.64
LIMS2-216ENST00000494613 LRRC37A5PQ49AS3 106 aa11.07□□□□□ -0.64
LIMS2-216ENST00000494613 OR5C1Q8NGR4 320 aa11.07□□□□□ -0.64
LIMS2-216ENST00000494613 OR10J6PQ8NGY7 276 aa11.07□□□□□ -0.64
LIMS2-216ENST00000494613 FAM210BQ96KR6 192 aa11.07□□□□□ -0.64
LIMS2-216ENST00000494613 P0DMU3 169 aa11.06□□□□□ -0.64
LIMS2-216ENST00000494613 FAM231AP0DMU4 169 aa11.06□□□□□ -0.64
LIMS2-216ENST00000494613 FAM231CP0DMU5 169 aa11.06□□□□□ -0.64
LIMS2-216ENST00000494613 TAS2R60P59551 318 aa11.06□□□□□ -0.64
LIMS2-216ENST00000494613 KIR3DS1Q14943 382 aa11.06□□□□□ -0.64
LIMS2-216ENST00000494613 TMEM256Q8N2U0 113 aa11.06□□□□□ -0.64
LIMS2-216ENST00000494613 POM121L12Q8N7R1 296 aa11.06□□□□□ -0.64
LIMS2-216ENST00000494613 THAP6Q8TBB0 222 aa11.06□□□□□ -0.64
LIMS2-216ENST00000494613 NPCDR1Q9BY65 106 aa11.06□□□□□ -0.64
LIMS2-216ENST00000494613 TRBV19A0A075B6N1 114 aa11.05□□□□□ -0.64
LIMS2-216ENST00000494613 PLAC8L1A1L4L8 177 aa11.05□□□□□ -0.64
LIMS2-216ENST00000494613 LYRM9A8MSI8 78 aa11.05□□□□□ -0.64
LIMS2-216ENST00000494613 CT45A10P0DMU9 189 aa11.05□□□□□ -0.64
LIMS2-216ENST00000494613 DEFA1P59665 94 aa11.05□□□□□ -0.64
LIMS2-216ENST00000494613 DEFA3P59666 94 aa11.05□□□□□ -0.64
LIMS2-216ENST00000494613 GCSAMLQ5JQS6 135 aa11.05□□□□□ -0.64
LIMS2-216ENST00000494613 PARD6GQ9BYG4 376 aaPredicted RBP11.05□□□□□ -0.64
LIMS2-216ENST00000494613 BATF3Q9NR55 127 aa11.05□□□□□ -0.64
LIMS2-216ENST00000494613 TMEM14CQ9P0S9 112 aa11.05□□□□□ -0.64
LIMS2-216ENST00000494613 ZNF253O75346 499 aa11.04□□□□□ -0.64
LIMS2-216ENST00000494613 NDUFB4O95168 129 aa11.04□□□□□ -0.64
LIMS2-216ENST00000494613 DEFB130BP0DP73 79 aa11.04□□□□□ -0.64
LIMS2-216ENST00000494613 DEFB130AP0DP74 79 aa11.04□□□□□ -0.64
LIMS2-216ENST00000494613 HIST1H1EP10412 219 aaKnown RBP11.04□□□□□ -0.64
LIMS2-216ENST00000494613 CLINT1Q14677 625 aa11.04□□□□□ -0.64
LIMS2-216ENST00000494613 PPP1R1CQ8WVI7 109 aa11.04□□□□□ -0.64
LIMS2-216ENST00000494613 SSNA1O43805 119 aa11.03□□□□□ -0.64
LIMS2-216ENST00000494613 PYYP10082 97 aa11.03□□□□□ -0.64
LIMS2-216ENST00000494613 TIMM9Q9Y5J7 89 aa11.03□□□□□ -0.64
LIMS2-216ENST00000494613 NPIPB6E9PJ23 425 aa11.02□□□□□ -0.65
LIMS2-216ENST00000494613 H7BYZ3 331 aa11.02□□□□□ -0.65
LIMS2-216ENST00000494613 MPC2O95563 127 aa11.02□□□□□ -0.65
LIMS2-216ENST00000494613 TMEM88Q6PEY1 159 aa11.02□□□□□ -0.65
LIMS2-216ENST00000494613 ZNF493Q6ZR52 646 aa11.02□□□□□ -0.65
LIMS2-216ENST00000494613 BLNKQ8WV28 456 aa11.02□□□□□ -0.65
LIMS2-216ENST00000494613 FAM167A-AS1Q96KT0 104 aa11.02□□□□□ -0.65
LIMS2-216ENST00000494613 C20orf144Q9BQM9 153 aa11.02□□□□□ -0.65
LIMS2-216ENST00000494613 SLC25A2Q9BXI2 301 aa11.02□□□□□ -0.65
LIMS2-216ENST00000494613 WDR61Q9GZS3 305 aaKnown RBP11.02□□□□□ -0.65
LIMS2-216ENST00000494613 TIMM8BQ9Y5J9 83 aaPredicted RBP11.02□□□□□ -0.65
LIMS2-216ENST00000494613 BIRC6Q9NR09 4857 aa11.02□□□□□ -0.65
LIMS2-216ENST00000494613 VPS13DQ5THJ4 4388 aa11.01□□□□□ -0.65
LIMS2-216ENST00000494613 CBY3A6NI87 242 aa11.01□□□□□ -0.65
LIMS2-216ENST00000494613 J3KRW8 73 aa11.01□□□□□ -0.65
LIMS2-216ENST00000494613 M0R3E3 92 aa11.01□□□□□ -0.65
LIMS2-216ENST00000494613 NBEAP1P0C6P0 100 aa11.01□□□□□ -0.65
LIMS2-216ENST00000494613 ERCC8Q13216 396 aa11.01□□□□□ -0.65
LIMS2-216ENST00000494613 MIR17HGQ75NE6 70 aa11.01□□□□□ -0.65
LIMS2-216ENST00000494613 EXOC3-AS1Q8N2X6 119 aa11.01□□□□□ -0.65
LIMS2-216ENST00000494613 C16orf74Q96GX8 76 aa11.01□□□□□ -0.65
LIMS2-216ENST00000494613 LINC00477Q96M19 166 aa11.01□□□□□ -0.65
LIMS2-216ENST00000494613 PRELID1Q9Y255 219 aa11.01□□□□□ -0.65
LIMS2-216ENST00000494613 TRAV12-3A0A0B4J271 114 aa11□□□□□ -0.65
LIMS2-216ENST00000494613 PDE6HQ13956 83 aa11□□□□□ -0.65
LIMS2-216ENST00000494613 GFI1BQ5VTD9 330 aa11□□□□□ -0.65
LIMS2-216ENST00000494613 MRPL53Q96EL3 112 aaKnown RBP11□□□□□ -0.65
LIMS2-216ENST00000494613 AGPAT4-IT1Q9H0P7 198 aa11□□□□□ -0.65
LIMS2-216ENST00000494613 OR51M1Q9H341 326 aa11□□□□□ -0.65
LIMS2-216ENST00000494613 NOP10Q9NPE3 64 aaKnown RBP11□□□□□ -0.65
LIMS2-216ENST00000494613 F5H768 121 aa10.99□□□□□ -0.65
LIMS2-216ENST00000494613 M0R2N4 97 aa10.99□□□□□ -0.65
LIMS2-216ENST00000494613 RPL12P30050 165 aaKnown RBP10.99□□□□□ -0.65
LIMS2-216ENST00000494613 LEPP41159 167 aa10.99□□□□□ -0.65
LIMS2-216ENST00000494613 ICAM4Q14773 271 aa10.99□□□□□ -0.65
LIMS2-216ENST00000494613 CCDC28AQ8IWP9 274 aa10.99□□□□□ -0.65
LIMS2-216ENST00000494613 RNASE8Q8TDE3 154 aaKnown RBP10.99□□□□□ -0.65
LIMS2-216ENST00000494613 ODF3Q96PU9 254 aa10.99□□□□□ -0.65
LIMS2-216ENST00000494613 HSPB11Q9Y547 144 aa10.99□□□□□ -0.65
LIMS2-216ENST00000494613 C17orf112F2Z3M2 114 aa10.98□□□□□ -0.65
LIMS2-216ENST00000494613 RNF212Q495C1 297 aa10.98□□□□□ -0.65
LIMS2-216ENST00000494613 SCGB1C1Q8TD33 95 aa10.98□□□□□ -0.65
LIMS2-216ENST00000494613 TMEM263Q8WUH6 116 aaKnown RBP10.98□□□□□ -0.65
LIMS2-216ENST00000494613 RNF141Q8WVD5 230 aa10.98□□□□□ -0.65
LIMS2-216ENST00000494613 ATP5SQ99766 215 aa10.98□□□□□ -0.65
LIMS2-216ENST00000494613 PAXXQ9BUH6 204 aa10.98□□□□□ -0.65
LIMS2-216ENST00000494613 AAMDCQ9H7C9 122 aa10.98□□□□□ -0.65
LIMS2-216ENST00000494613 FRAS1Q86XX4 4008 aa10.97□□□□□ -0.65
LIMS2-216ENST00000494613 SLC25A5P05141 298 aaKnown RBP10.97□□□□□ -0.65
LIMS2-216ENST00000494613 ATP5G1P05496 136 aa10.97□□□□□ -0.65
LIMS2-216ENST00000494613 PET100P0DJ07 73 aa10.97□□□□□ -0.65
LIMS2-216ENST00000494613 ATP5G3P48201 142 aa10.97□□□□□ -0.65
LIMS2-216ENST00000494613 UBE2DNLQ8IWF7 75 aa10.97□□□□□ -0.65
LIMS2-216ENST00000494613 C15orf53Q8NAA6 179 aa10.97□□□□□ -0.65
LIMS2-216ENST00000494613 FXYD5Q96DB9 178 aa10.97□□□□□ -0.65
LIMS2-216ENST00000494613 FAM19A4Q96LR4 140 aa10.97□□□□□ -0.65
LIMS2-216ENST00000494613 SMIM3Q9BZL3 60 aa10.97□□□□□ -0.65
LIMS2-216ENST00000494613 FUT9Q9Y231 359 aa10.97□□□□□ -0.65
LIMS2-216ENST00000494613 ZNF324O75467 553 aaPredicted RBP10.96□□□□□ -0.65
LIMS2-216ENST00000494613 IFNA5P01569 189 aa10.96□□□□□ -0.65
LIMS2-216ENST00000494613 OR10J4P0C629 311 aa10.96□□□□□ -0.65
LIMS2-216ENST00000494613 RNASE4P34096 147 aaKnown RBP10.96□□□□□ -0.65
LIMS2-216ENST00000494613 CD300CQ08708 224 aa10.96□□□□□ -0.65
LIMS2-216ENST00000494613 LGALS9BQ3B8N2 356 aa10.96□□□□□ -0.65
LIMS2-216ENST00000494613 FFAR4Q5NUL3 377 aa10.96□□□□□ -0.65
LIMS2-216ENST00000494613 FAM122CQ6P4D5 195 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms