RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 ZBTB8BQ8NAP8 495 aaPredicted RBP6.67□□□□□ -1.34
UBR4-216ENST00000494503 SMIM8Q96KF7 97 aa6.67□□□□□ -1.34
UBR4-216ENST00000494503 FLVCR2Q9UPI3 526 aa6.67□□□□□ -1.34
UBR4-216ENST00000494503 MRPS16Q9Y3D3 137 aaKnown RBP6.67□□□□□ -1.34
UBR4-216ENST00000494503 PXMP4Q9Y6I8 212 aa6.67□□□□□ -1.34
UBR4-216ENST00000494503 A0A1W2PPQ1 181 aa6.66□□□□□ -1.34
UBR4-216ENST00000494503 FAM25EA8MYX2 175 aa6.66□□□□□ -1.34
UBR4-216ENST00000494503 IGHV3-53P01767 116 aa6.66□□□□□ -1.34
UBR4-216ENST00000494503 UBE2MP61081 183 aaKnown RBP6.66□□□□□ -1.34
UBR4-216ENST00000494503 RAB31Q13636 194 aa6.66□□□□□ -1.34
UBR4-216ENST00000494503 OPCMLQ14982 345 aa6.66□□□□□ -1.34
UBR4-216ENST00000494503 PXDC1Q5TGL8 231 aa6.66□□□□□ -1.34
UBR4-216ENST00000494503 Q6ZRG5 221 aa6.66□□□□□ -1.34
UBR4-216ENST00000494503 ZNF503Q96F45 646 aa6.66□□□□□ -1.34
UBR4-216ENST00000494503 SOSTQ9BQB4 213 aa6.66□□□□□ -1.34
UBR4-216ENST00000494503 PYGO2Q9BRQ0 406 aa6.66□□□□□ -1.34
UBR4-216ENST00000494503 UPK3BQ9BT76 320 aa6.66□□□□□ -1.34
UBR4-216ENST00000494503 GSN-AS1Q9NRJ2 163 aa6.66□□□□□ -1.34
UBR4-216ENST00000494503 V9GYH0 126 aa6.66□□□□□ -1.34
UBR4-216ENST00000494503 DMBT1Q9UGM3 2413 aaPredicted RBP6.65□□□□□ -1.34
UBR4-216ENST00000494503 A0A096LPF7 62 aa6.65□□□□□ -1.34
UBR4-216ENST00000494503 MRPS12O15235 138 aaKnown RBP6.65□□□□□ -1.34
UBR4-216ENST00000494503 SIVA1O15304 175 aa6.65□□□□□ -1.34
UBR4-216ENST00000494503 TSC22D2O75157 780 aa6.65□□□□□ -1.34
UBR4-216ENST00000494503 OR4E1P0C645 316 aa6.65□□□□□ -1.34
UBR4-216ENST00000494503 CT45A10P0DMU9 189 aa6.65□□□□□ -1.34
UBR4-216ENST00000494503 CAMLGP49069 296 aa6.65□□□□□ -1.34
UBR4-216ENST00000494503 CAV2P51636 162 aa6.65□□□□□ -1.34
UBR4-216ENST00000494503 ERVFC1-1P60608 527 aa6.65□□□□□ -1.34
UBR4-216ENST00000494503 ZNF846Q147U1 533 aa6.65□□□□□ -1.34
UBR4-216ENST00000494503 SPANXN2Q5MJ10 180 aa6.65□□□□□ -1.34
UBR4-216ENST00000494503 MORN5Q5VZ52 161 aa6.65□□□□□ -1.34
UBR4-216ENST00000494503 TMEM14EPQ6UXP3 125 aa6.65□□□□□ -1.34
UBR4-216ENST00000494503 MGST2Q99735 147 aa6.65□□□□□ -1.34
UBR4-216ENST00000494503 FUT9Q9Y231 359 aa6.65□□□□□ -1.34
UBR4-216ENST00000494503 RCL1Q9Y2P8 373 aaKnown RBP6.65□□□□□ -1.34
UBR4-216ENST00000494503 LSM5Q9Y4Y9 91 aaKnown RBP6.65□□□□□ -1.34
UBR4-216ENST00000494503 LRP1BQ9NZR2 4599 aa6.65□□□□□ -1.35
UBR4-216ENST00000494503 TRAV5A0A0B4J249 113 aa6.64□□□□□ -1.35
UBR4-216ENST00000494503 C7orf71A4D174 169 aa6.64□□□□□ -1.35
UBR4-216ENST00000494503 CENPXA8MT69 81 aa6.64□□□□□ -1.35
UBR4-216ENST00000494503 FNDC10F2Z333 226 aa6.64□□□□□ -1.35
UBR4-216ENST00000494503 H3BQ15 152 aa6.64□□□□□ -1.35
UBR4-216ENST00000494503 CCSO14618 274 aa6.64□□□□□ -1.35
UBR4-216ENST00000494503 NDUFB6O95139 128 aa6.64□□□□□ -1.35
UBR4-216ENST00000494503 NXPH4O95158 308 aa6.64□□□□□ -1.35
UBR4-216ENST00000494503 BTF3P20290 206 aaKnown RBP6.64□□□□□ -1.35
UBR4-216ENST00000494503 RNASE4P34096 147 aaKnown RBP6.64□□□□□ -1.35
UBR4-216ENST00000494503 ARL16Q0P5N6 197 aa6.64□□□□□ -1.35
UBR4-216ENST00000494503 ERCC8Q13216 396 aa6.64□□□□□ -1.35
UBR4-216ENST00000494503 MIC13Q5XKP0 118 aa6.64□□□□□ -1.35
UBR4-216ENST00000494503 ZNF680Q8NEM1 530 aa6.64□□□□□ -1.35
UBR4-216ENST00000494503 ZNF431Q8TF32 576 aaPredicted RBP6.64□□□□□ -1.35
UBR4-216ENST00000494503 DEDD2Q8WXF8 326 aa6.64□□□□□ -1.35
UBR4-216ENST00000494503 TMEM37Q8WXS4 190 aa6.64□□□□□ -1.35
UBR4-216ENST00000494503 ICOSQ9Y6W8 199 aa6.64□□□□□ -1.35
UBR4-216ENST00000494503 UBE2L5PA0A1B0GUS4 154 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 NAP1L6A6NFF2 107 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 H3BNG1 76 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 K7EPK0 472 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 RGS13O14921 159 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 PAX4O43316 350 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 CST7O76096 145 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 IFNA5P01569 189 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 INAFM2P0DMQ5 153 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 IGLC2P0DOY2 106 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 S100A10P60903 97 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 BAXQ07812 192 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 DAZ2Q13117 558 aaKnown RBP6.63□□□□□ -1.35
UBR4-216ENST00000494503 BTN1A1Q13410 526 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 GUK1Q16774 197 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 NRARPQ7Z6K4 114 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 LINC00612Q8N6U2 182 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 OR1L4Q8NGR5 311 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 BLNKQ8WV28 456 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 VSIG2Q96IQ7 327 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 PFDN5Q99471 154 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 ARPC5LQ9BPX5 153 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 DNAJC4Q9NNZ3 241 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 TIMM9Q9Y5J7 89 aa6.63□□□□□ -1.35
UBR4-216ENST00000494503 C7orf66A4D0T2 115 aa6.62□□□□□ -1.35
UBR4-216ENST00000494503 C5orf51A6NDU8 294 aa6.62□□□□□ -1.35
UBR4-216ENST00000494503 NPIPB6E9PJ23 425 aa6.62□□□□□ -1.35
UBR4-216ENST00000494503 M0R3E3 92 aa6.62□□□□□ -1.35
UBR4-216ENST00000494503 MBPP02686 304 aaPredicted RBP6.62□□□□□ -1.35
UBR4-216ENST00000494503 SLC25A5P05141 298 aaKnown RBP6.62□□□□□ -1.35
UBR4-216ENST00000494503 GPX1P07203 203 aa6.62□□□□□ -1.35
UBR4-216ENST00000494503 TAS2R30P59541 319 aa6.62□□□□□ -1.35
UBR4-216ENST00000494503 EIF4E3Q8N5X7 224 aaKnown RBP6.62□□□□□ -1.35
UBR4-216ENST00000494503 FRZBQ92765 325 aa6.62□□□□□ -1.35
UBR4-216ENST00000494503 ODF3Q96PU9 254 aa6.62□□□□□ -1.35
UBR4-216ENST00000494503 GGACTQ9BVM4 153 aa6.62□□□□□ -1.35
UBR4-216ENST00000494503 MRPL16Q9NX20 251 aaKnown RBP6.62□□□□□ -1.35
UBR4-216ENST00000494503 KLF12Q9Y4X4 402 aa6.62□□□□□ -1.35
UBR4-216ENST00000494503 TNFRSF18Q9Y5U5 241 aa6.62□□□□□ -1.35
UBR4-216ENST00000494503 MPDU1O75352 247 aa6.61□□□□□ -1.35
UBR4-216ENST00000494503 DNAH10OSP0CZ25 163 aa6.61□□□□□ -1.35
UBR4-216ENST00000494503 PVALBP20472 110 aaPredicted RBP6.61□□□□□ -1.35
UBR4-216ENST00000494503 CD300CQ08708 224 aa6.61□□□□□ -1.35
UBR4-216ENST00000494503 TMEM78Q5T7P6 136 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms