RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ZNF705FA8MVS1 300 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-223ENST00000494123 F6UB75 175 aa10.76□□□□□ -0.69
BRCA1-223ENST00000494123 RPL35AP18077 110 aaKnown RBP10.76□□□□□ -0.69
BRCA1-223ENST00000494123 GDF5OSQ5U4N7 250 aa10.76□□□□□ -0.69
BRCA1-223ENST00000494123 A0A0J9YX75 114 aa10.76□□□□□ -0.69
BRCA1-223ENST00000494123 M0R3E3 92 aa10.76□□□□□ -0.69
BRCA1-223ENST00000494123 HLA-DRB4P13762 266 aa10.76□□□□□ -0.69
BRCA1-223ENST00000494123 CSN1S1P47710 185 aa10.76□□□□□ -0.69
BRCA1-223ENST00000494123 OR4B1Q8NGF8 309 aa10.76□□□□□ -0.69
BRCA1-223ENST00000494123 SUN5Q8TC36 379 aa10.76□□□□□ -0.69
BRCA1-223ENST00000494123 MRPL53Q96EL3 112 aaKnown RBP10.76□□□□□ -0.69
BRCA1-223ENST00000494123 OTORQ9NRC9 128 aa10.76□□□□□ -0.69
BRCA1-223ENST00000494123 HLA-DRB4X5D2U9 266 aa10.76□□□□□ -0.69
BRCA1-223ENST00000494123 RBMY1BA6NDE4 496 aaKnown RBP10.75□□□□□ -0.69
BRCA1-223ENST00000494123 RBMY1EA6NEQ0 496 aaKnown RBP10.75□□□□□ -0.69
BRCA1-223ENST00000494123 DUSP14O95147 198 aaKnown RBP10.75□□□□□ -0.69
BRCA1-223ENST00000494123 IGKV3-20P01619 116 aa10.75□□□□□ -0.69
BRCA1-223ENST00000494123 HBE1P02100 147 aa10.75□□□□□ -0.69
BRCA1-223ENST00000494123 RBMY1DP0C7P1 496 aaKnown RBP10.75□□□□□ -0.69
BRCA1-223ENST00000494123 PRB4P10163 310 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-223ENST00000494123 HIST1H1AQ02539 215 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-223ENST00000494123 OR10J6PQ8NGY7 276 aa10.75□□□□□ -0.69
BRCA1-223ENST00000494123 CMTM2Q8TAZ6 248 aa10.75□□□□□ -0.69
BRCA1-223ENST00000494123 PGPA6NDG6 321 aa10.74□□□□□ -0.69
BRCA1-223ENST00000494123 H3BMM0 161 aa10.74□□□□□ -0.69
BRCA1-223ENST00000494123 ZNF705DP0CH99 300 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-223ENST00000494123 ZNF705BP0CI00 300 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-223ENST00000494123 APOC4P55056 127 aa10.74□□□□□ -0.69
BRCA1-223ENST00000494123 UBE2G2P60604 165 aa10.74□□□□□ -0.69
BRCA1-223ENST00000494123 TRPT1Q86TN4 253 aaKnown RBP10.74□□□□□ -0.69
BRCA1-223ENST00000494123 OR8A1Q8NGG7 326 aa10.74□□□□□ -0.69
BRCA1-223ENST00000494123 RXFP4Q8TDU9 374 aa10.74□□□□□ -0.69
BRCA1-223ENST00000494123 AGRNO00468 2067 aa10.74□□□□□ -0.69
BRCA1-223ENST00000494123 NUTF2P61970 127 aaKnown RBP10.73□□□□□ -0.69
BRCA1-223ENST00000494123 BLOC1S1P78537 153 aa10.73□□□□□ -0.69
BRCA1-223ENST00000494123 TEX261Q6UWH6 196 aa10.73□□□□□ -0.69
BRCA1-223ENST00000494123 RPH3ALQ9UNE2 315 aa10.73□□□□□ -0.69
BRCA1-223ENST00000494123 TRAV1-1A0A0B4J248 108 aa10.73□□□□□ -0.69
BRCA1-223ENST00000494123 A0A1W2PRE2 83 aa10.73□□□□□ -0.69
BRCA1-223ENST00000494123 PRAC2D3DTV9 90 aa10.73□□□□□ -0.69
BRCA1-223ENST00000494123 IFNA7P01567 189 aa10.73□□□□□ -0.69
BRCA1-223ENST00000494123 SLC25A5P05141 298 aaKnown RBP10.73□□□□□ -0.69
BRCA1-223ENST00000494123 PPT1P50897 306 aa10.73□□□□□ -0.69
BRCA1-223ENST00000494123 CNN1P51911 297 aaKnown RBP10.73□□□□□ -0.69
BRCA1-223ENST00000494123 LINC00322Q6ZN03 302 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-223ENST00000494123 PPP1R14DQ9NXH3 145 aa10.73□□□□□ -0.69
BRCA1-223ENST00000494123 KIR2DL5BA0A0G2JN68 375 aa10.72□□□□□ -0.69
BRCA1-223ENST00000494123 KIR2DL5BA0A0G2JPC4 375 aa10.72□□□□□ -0.69
BRCA1-223ENST00000494123 SUMO1P63165 101 aaKnown RBP10.72□□□□□ -0.69
BRCA1-223ENST00000494123 MORN3Q6PF18 240 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-223ENST00000494123 KIR2DL5AQ8N109 375 aa10.72□□□□□ -0.69
BRCA1-223ENST00000494123 KIR2DL5BQ8NHK3 375 aa10.72□□□□□ -0.69
BRCA1-223ENST00000494123 B9D2Q9BPU9 175 aa10.72□□□□□ -0.69
BRCA1-223ENST00000494123 NKX6-2Q9C056 277 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-223ENST00000494123 CSTL1Q9H114 145 aa10.72□□□□□ -0.69
BRCA1-223ENST00000494123 YTHDF2Q9Y5A9 579 aaKnown RBP10.72□□□□□ -0.69
BRCA1-223ENST00000494123 FAM74A7A6NL05 159 aa10.71□□□□□ -0.69
BRCA1-223ENST00000494123 GGTLC3B5MD39 225 aa10.71□□□□□ -0.69
BRCA1-223ENST00000494123 HAGHQ16775 308 aa10.71□□□□□ -0.69
BRCA1-223ENST00000494123 CST9LP1Q5W188 147 aa10.71□□□□□ -0.69
BRCA1-223ENST00000494123 C5orf17Q8NAS9 161 aa10.71□□□□□ -0.69
BRCA1-223ENST00000494123 ZNF680Q8NEM1 530 aa10.71□□□□□ -0.69
BRCA1-223ENST00000494123 ASCL2Q99929 193 aa10.71□□□□□ -0.69
BRCA1-223ENST00000494123 IGKV2-40A0A087WW87 121 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-223ENST00000494123 DIRC3C9JPN6 131 aa10.7□□□□□ -0.7
BRCA1-223ENST00000494123 UBE2CO00762 179 aa10.7□□□□□ -0.7
BRCA1-223ENST00000494123 PAGE4O60829 102 aa10.7□□□□□ -0.7
BRCA1-223ENST00000494123 CA1P00915 261 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-223ENST00000494123 IGKV2D-40P01614 121 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-223ENST00000494123 SBSPONQ8IVN8 264 aa10.7□□□□□ -0.7
BRCA1-223ENST00000494123 CLUHP3Q96NS8 147 aa10.7□□□□□ -0.7
BRCA1-223ENST00000494123 GNG13Q9P2W3 67 aa10.7□□□□□ -0.7
BRCA1-223ENST00000494123 ARL2-SNX15V9GYD0 113 aa10.7□□□□□ -0.7
BRCA1-223ENST00000494123 NPIPB6E9PJ23 425 aa10.69□□□□□ -0.7
BRCA1-223ENST00000494123 IFNA1P01562 189 aa10.69□□□□□ -0.7
BRCA1-223ENST00000494123 GNG5P63218 68 aa10.69□□□□□ -0.7
BRCA1-223ENST00000494123 CCL20P78556 96 aa10.69□□□□□ -0.7
BRCA1-223ENST00000494123 TMEM78Q5T7P6 136 aa10.69□□□□□ -0.7
BRCA1-223ENST00000494123 ARL6IP6Q8N6S5 226 aa10.69□□□□□ -0.7
BRCA1-223ENST00000494123 MANBALQ9NQG1 85 aa10.69□□□□□ -0.7
BRCA1-223ENST00000494123 RBAKDNA6NC62 111 aa10.69□□□□□ -0.7
BRCA1-223ENST00000494123 K7EQM0 130 aa10.69□□□□□ -0.7
BRCA1-223ENST00000494123 FXYD7P58549 80 aa10.69□□□□□ -0.7
BRCA1-223ENST00000494123 ERCC8Q13216 396 aa10.69□□□□□ -0.7
BRCA1-223ENST00000494123 GOLT1AQ6ZVE7 132 aa10.69□□□□□ -0.7
BRCA1-223ENST00000494123 C1QTNF4Q9BXJ3 329 aa10.69□□□□□ -0.7
BRCA1-223ENST00000494123 SLC35B3Q9H1N7 401 aa10.69□□□□□ -0.7
BRCA1-223ENST00000494123 SERTM2A0A1B0GWG4 89 aa10.68□□□□□ -0.7
BRCA1-223ENST00000494123 A8MTW9 85 aa10.68□□□□□ -0.7
BRCA1-223ENST00000494123 C9orf47Q6ZRZ4 202 aa10.68□□□□□ -0.7
BRCA1-223ENST00000494123 LINC00477Q96M19 166 aa10.68□□□□□ -0.7
BRCA1-223ENST00000494123 EPDR1Q9UM22 224 aa10.68□□□□□ -0.7
BRCA1-223ENST00000494123 TCRAP04437 139 aa10.67□□□□□ -0.7
BRCA1-223ENST00000494123 ATP5G3P48201 142 aa10.67□□□□□ -0.7
BRCA1-223ENST00000494123 DEFB135Q30KP9 77 aa10.67□□□□□ -0.7
BRCA1-223ENST00000494123 AMTNQ6UX39 209 aa10.67□□□□□ -0.7
BRCA1-223ENST00000494123 VGLL1Q99990 258 aa10.67□□□□□ -0.7
BRCA1-223ENST00000494123 ATG101Q9BSB4 218 aa10.67□□□□□ -0.7
BRCA1-223ENST00000494123 AGPAT4-IT1Q9H0P7 198 aa10.67□□□□□ -0.7
BRCA1-223ENST00000494123 XCL2Q9UBD3 114 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms