RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 IL15RAQ13261 267 aa9.45□□□□□ -0.9
CTDSP1-212ENST00000494067 STX12Q86Y82 276 aa9.45□□□□□ -0.9
CTDSP1-212ENST00000494067 CCDC32Q9BV29 185 aa9.45□□□□□ -0.9
CTDSP1-212ENST00000494067 PARD6GQ9BYG4 376 aaPredicted RBP9.45□□□□□ -0.9
CTDSP1-212ENST00000494067 A0A1B0GVY2 172 aa9.44□□□□□ -0.9
CTDSP1-212ENST00000494067 FAM240BA0A1B0GVZ2 78 aa9.44□□□□□ -0.9
CTDSP1-212ENST00000494067 NUDT3O95989 172 aa9.44□□□□□ -0.9
CTDSP1-212ENST00000494067 CCL18P55774 89 aa9.44□□□□□ -0.9
CTDSP1-212ENST00000494067 BAXQ07812 192 aa9.44□□□□□ -0.9
CTDSP1-212ENST00000494067 OPCMLQ14982 345 aa9.44□□□□□ -0.9
CTDSP1-212ENST00000494067 FCN2Q15485 313 aa9.44□□□□□ -0.9
CTDSP1-212ENST00000494067 ATP6V1FQ16864 119 aa9.44□□□□□ -0.9
CTDSP1-212ENST00000494067 C1orf134Q5TEV5 83 aa9.44□□□□□ -0.9
CTDSP1-212ENST00000494067 MIC13Q5XKP0 118 aa9.44□□□□□ -0.9
CTDSP1-212ENST00000494067 MZT2BQ6NZ67 158 aa9.44□□□□□ -0.9
CTDSP1-212ENST00000494067 TMEM263Q8WUH6 116 aaKnown RBP9.44□□□□□ -0.9
CTDSP1-212ENST00000494067 PKHD1P08F94 4074 aa9.44□□□□□ -0.9
CTDSP1-212ENST00000494067 TRAV5A0A0B4J249 113 aa9.43□□□□□ -0.9
CTDSP1-212ENST00000494067 IGSF23A1L1A6 192 aa9.43□□□□□ -0.9
CTDSP1-212ENST00000494067 H3BQ15 152 aa9.43□□□□□ -0.9
CTDSP1-212ENST00000494067 RTL8CO15255 209 aa9.43□□□□□ -0.9
CTDSP1-212ENST00000494067 LEPP41159 167 aa9.43□□□□□ -0.9
CTDSP1-212ENST00000494067 SULT1A1P50225 295 aa9.43□□□□□ -0.9
CTDSP1-212ENST00000494067 CLINT1Q14677 625 aa9.43□□□□□ -0.9
CTDSP1-212ENST00000494067 Q6ZR54 194 aa9.43□□□□□ -0.9
CTDSP1-212ENST00000494067 NOP10Q9NPE3 64 aaKnown RBP9.43□□□□□ -0.9
CTDSP1-212ENST00000494067 LYRM2Q9NU23 88 aaPredicted RBP9.43□□□□□ -0.9
CTDSP1-212ENST00000494067 WDR83OSQ9Y284 106 aa9.43□□□□□ -0.9
CTDSP1-212ENST00000494067 UBE2L5PA0A1B0GUS4 154 aa9.42□□□□□ -0.9
CTDSP1-212ENST00000494067 SNURFLB1AK76 121 aa9.42□□□□□ -0.9
CTDSP1-212ENST00000494067 RLN2P04090 185 aa9.42□□□□□ -0.9
CTDSP1-212ENST00000494067 IGLC2P0DOY2 106 aa9.42□□□□□ -0.9
CTDSP1-212ENST00000494067 RPL29P47914 159 aaKnown RBP9.42□□□□□ -0.9
CTDSP1-212ENST00000494067 RAB32Q13637 225 aa9.42□□□□□ -0.9
CTDSP1-212ENST00000494067 VWC2Q2TAL6 325 aa9.42□□□□□ -0.9
CTDSP1-212ENST00000494067 TMEM252Q8N6L7 170 aa9.42□□□□□ -0.9
CTDSP1-212ENST00000494067 SAT2Q96F10 170 aaPredicted RBP9.42□□□□□ -0.9
CTDSP1-212ENST00000494067 GPN1Q9HCN4 374 aaPredicted RBP9.42□□□□□ -0.9
CTDSP1-212ENST00000494067 SLC39A9Q9NUM3 307 aa9.42□□□□□ -0.9
CTDSP1-212ENST00000494067 TIMM9Q9Y5J7 89 aa9.42□□□□□ -0.9
CTDSP1-212ENST00000494067 DYNC1H1Q14204 4646 aaKnown RBP9.42□□□□□ -0.9
CTDSP1-212ENST00000494067 ZNF253O75346 499 aa9.41□□□□□ -0.9
CTDSP1-212ENST00000494067 MPDU1O75352 247 aa9.41□□□□□ -0.9
CTDSP1-212ENST00000494067 FGF7P21781 194 aa9.41□□□□□ -0.9
CTDSP1-212ENST00000494067 IFITM3Q01628 133 aa9.41□□□□□ -0.9
CTDSP1-212ENST00000494067 RNASE8Q8TDE3 154 aaKnown RBP9.41□□□□□ -0.9
CTDSP1-212ENST00000494067 S100ZQ8WXG8 99 aa9.41□□□□□ -0.9
CTDSP1-212ENST00000494067 ODF3Q96PU9 254 aa9.41□□□□□ -0.9
CTDSP1-212ENST00000494067 PRELID1Q9Y255 219 aa9.41□□□□□ -0.9
CTDSP1-212ENST00000494067 J3KRW8 73 aa9.4□□□□□ -0.9
CTDSP1-212ENST00000494067 MED14OSP0DP75 135 aa9.4□□□□□ -0.9
CTDSP1-212ENST00000494067 OR5I1Q13606 314 aa9.4□□□□□ -0.9
CTDSP1-212ENST00000494067 LINC00299Q6ZSB3 139 aa9.4□□□□□ -0.9
CTDSP1-212ENST00000494067 CHAC2Q8WUX2 184 aa9.4□□□□□ -0.9
CTDSP1-212ENST00000494067 MRPL53Q96EL3 112 aaKnown RBP9.4□□□□□ -0.9
CTDSP1-212ENST00000494067 PYGO2Q9BRQ0 406 aa9.4□□□□□ -0.9
CTDSP1-212ENST00000494067 SLC25A31Q9H0C2 315 aa9.4□□□□□ -0.9
CTDSP1-212ENST00000494067 AAMDCQ9H7C9 122 aa9.4□□□□□ -0.9
CTDSP1-212ENST00000494067 NPIPB6E9PJ23 425 aa9.39□□□□□ -0.91
CTDSP1-212ENST00000494067 SIX6O95475 246 aa9.39□□□□□ -0.91
CTDSP1-212ENST00000494067 HIST1H1EP10412 219 aaKnown RBP9.39□□□□□ -0.91
CTDSP1-212ENST00000494067 GCSAMLQ5JQS6 135 aa9.39□□□□□ -0.91
CTDSP1-212ENST00000494067 GFI1BQ5VTD9 330 aa9.39□□□□□ -0.91
CTDSP1-212ENST00000494067 ENKURQ8TC29 256 aa9.39□□□□□ -0.91
CTDSP1-212ENST00000494067 GNPNAT1Q96EK6 184 aaPredicted RBP9.39□□□□□ -0.91
CTDSP1-212ENST00000494067 ZNF586Q9NXT0 402 aa9.39□□□□□ -0.91
CTDSP1-212ENST00000494067 TMEM14CQ9P0S9 112 aa9.39□□□□□ -0.91
CTDSP1-212ENST00000494067 DNAH11Q96DT5 4516 aa9.39□□□□□ -0.91
CTDSP1-212ENST00000494067 TRBV19A0A075B6N1 114 aa9.38□□□□□ -0.91
CTDSP1-212ENST00000494067 TRAV12-3A0A0B4J271 114 aa9.38□□□□□ -0.91
CTDSP1-212ENST00000494067 GAGE12BA1L429 117 aa9.38□□□□□ -0.91
CTDSP1-212ENST00000494067 GAGE7O76087 117 aa9.38□□□□□ -0.91
CTDSP1-212ENST00000494067 SLC25A5P05141 298 aaKnown RBP9.38□□□□□ -0.91
CTDSP1-212ENST00000494067 GAGE12FP0CL80 117 aa9.38□□□□□ -0.91
CTDSP1-212ENST00000494067 GAGE12GP0CL81 117 aa9.38□□□□□ -0.91
CTDSP1-212ENST00000494067 GAGE12IP0CL82 117 aa9.38□□□□□ -0.91
CTDSP1-212ENST00000494067 M6PRP20645 277 aa9.38□□□□□ -0.91
CTDSP1-212ENST00000494067 ASAH1Q13510 395 aa9.38□□□□□ -0.91
CTDSP1-212ENST00000494067 PDE6HQ13956 83 aa9.38□□□□□ -0.91
CTDSP1-212ENST00000494067 RNF141Q8WVD5 230 aa9.38□□□□□ -0.91
CTDSP1-212ENST00000494067 LINC00477Q96M19 166 aa9.38□□□□□ -0.91
CTDSP1-212ENST00000494067 KCNIP2Q9NS61 270 aa9.38□□□□□ -0.91
CTDSP1-212ENST00000494067 NBDYA0A0U1RRE5 68 aa9.37□□□□□ -0.91
CTDSP1-212ENST00000494067 H0YIZ8 118 aa9.37□□□□□ -0.91
CTDSP1-212ENST00000494067 NDUFB4O95168 129 aa9.37□□□□□ -0.91
CTDSP1-212ENST00000494067 CT45A10P0DMU9 189 aa9.37□□□□□ -0.91
CTDSP1-212ENST00000494067 CYCSP99999 105 aaKnown RBP9.37□□□□□ -0.91
CTDSP1-212ENST00000494067 ZNF680Q8NEM1 530 aa9.37□□□□□ -0.91
CTDSP1-212ENST00000494067 BLNKQ8WV28 456 aa9.37□□□□□ -0.91
CTDSP1-212ENST00000494067 TRAV26-1A0A087WT03 109 aa9.36□□□□□ -0.91
CTDSP1-212ENST00000494067 C7orf71A4D174 169 aa9.36□□□□□ -0.91
CTDSP1-212ENST00000494067 E5RGE8 158 aa9.36□□□□□ -0.91
CTDSP1-212ENST00000494067 C17orf112F2Z3M2 114 aa9.36□□□□□ -0.91
CTDSP1-212ENST00000494067 M0R3E3 92 aa9.36□□□□□ -0.91
CTDSP1-212ENST00000494067 PYYP10082 97 aa9.36□□□□□ -0.91
CTDSP1-212ENST00000494067 NHLH2Q02577 135 aa9.36□□□□□ -0.91
CTDSP1-212ENST00000494067 SSX7Q7RTT5 188 aa9.36□□□□□ -0.91
CTDSP1-212ENST00000494067 C6orf223Q8N319 242 aa9.36□□□□□ -0.91
CTDSP1-212ENST00000494067 ZNRF2Q8NHG8 242 aa9.36□□□□□ -0.91
CTDSP1-212ENST00000494067 RXFP4Q8TDU9 374 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms