RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 ZNF207O43670 478 aaKnown RBP8.18□□□□□ -1.1
CLCN6-208ENST00000494028 SPINK4O60575 86 aa8.18□□□□□ -1.1
CLCN6-208ENST00000494028 IGHV3-11P01762 117 aa8.18□□□□□ -1.1
CLCN6-208ENST00000494028 Q6YL49 198 aa8.18□□□□□ -1.1
CLCN6-208ENST00000494028 LCNL1Q6ZST4 164 aa8.18□□□□□ -1.1
CLCN6-208ENST00000494028 WIPF2Q8TF74 440 aaPredicted RBP8.18□□□□□ -1.1
CLCN6-208ENST00000494028 GLMPQ8WWB7 406 aa8.18□□□□□ -1.1
CLCN6-208ENST00000494028 SLC50A1Q9BRV3 221 aa8.18□□□□□ -1.1
CLCN6-208ENST00000494028 GNB1LQ9BYB4 327 aa8.18□□□□□ -1.1
CLCN6-208ENST00000494028 NAV2Q8IVL1 2488 aa8.17□□□□□ -1.1
CLCN6-208ENST00000494028 IGHV3-49A0A0A0MS15 119 aa8.17□□□□□ -1.1
CLCN6-208ENST00000494028 A0A1B0GUS0 222 aa8.17□□□□□ -1.1
CLCN6-208ENST00000494028 P01737 135 aa8.17□□□□□ -1.1
CLCN6-208ENST00000494028 HLA-DQA1P01909 254 aa8.17□□□□□ -1.1
CLCN6-208ENST00000494028 CSN1S1P47710 185 aa8.17□□□□□ -1.1
CLCN6-208ENST00000494028 RPL19P84098 196 aaKnown RBP8.17□□□□□ -1.1
CLCN6-208ENST00000494028 RASL11AQ6T310 242 aa8.17□□□□□ -1.1
CLCN6-208ENST00000494028 UNQ9165/PRO28630Q6UXU0 137 aa8.17□□□□□ -1.1
CLCN6-208ENST00000494028 TCF24Q7RTU0 167 aa8.17□□□□□ -1.1
CLCN6-208ENST00000494028 NUP35Q8NFH5 326 aa8.17□□□□□ -1.1
CLCN6-208ENST00000494028 C8orf49Q96NF6 230 aa8.17□□□□□ -1.1
CLCN6-208ENST00000494028 HIST1H2BLQ99880 126 aa8.17□□□□□ -1.1
CLCN6-208ENST00000494028 PRDM13Q9H4Q3 707 aa8.17□□□□□ -1.1
CLCN6-208ENST00000494028 ZNF702PQ9H963 129 aa8.17□□□□□ -1.1
CLCN6-208ENST00000494028 NAT8BQ9UHF3 227 aa8.17□□□□□ -1.1
CLCN6-208ENST00000494028 ZFP30Q9Y2G7 519 aa8.17□□□□□ -1.1
CLCN6-208ENST00000494028 CSPG4Q6UVK1 2322 aa8.17□□□□□ -1.1
CLCN6-208ENST00000494028 IGHV3OR16-13A0A075B7E8 117 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 IGHV3-74A0A0B4J1X5 117 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 TRAV8-2A0A0B4J237 113 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 FBLL1A6NHQ2 334 aaKnown RBP8.16□□□□□ -1.1
CLCN6-208ENST00000494028 CYSRT1A8MQ03 144 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 HIGD1CA8MV81 97 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 AMBPP02760 352 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 PSMB8P28062 276 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 S100A2P29034 98 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 LINC00310P59036 64 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 GDF5OSQ5U4N7 250 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 IGFL4Q6B9Z1 124 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 CYB5R2Q6BCY4 276 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 C8orf86Q6ZUL3 223 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 COX8CQ7Z4L0 72 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 ATP5L2Q7Z4Y8 100 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 WFDC11Q8NEX6 87 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 OR4X2Q8NGF9 303 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 Q8TAT8 98 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 GTSF1Q8WW33 167 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 MRPL53Q96EL3 112 aaKnown RBP8.16□□□□□ -1.1
CLCN6-208ENST00000494028 GFRA4Q9GZZ7 299 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 TP53TG3Q9ULZ0 132 aa8.16□□□□□ -1.1
CLCN6-208ENST00000494028 SETXQ7Z333 2677 aaKnown RBP8.15□□□□□ -1.1
CLCN6-208ENST00000494028 A0A0G2JLM5 398 aa8.15□□□□□ -1.1
CLCN6-208ENST00000494028 TMEM89A2RUT3 159 aa8.15□□□□□ -1.1
CLCN6-208ENST00000494028 GRIFINA4D1Z8 144 aa8.15□□□□□ -1.1
CLCN6-208ENST00000494028 A8MWL6 223 aa8.15□□□□□ -1.1
CLCN6-208ENST00000494028 FABP4P15090 132 aa8.15□□□□□ -1.1
CLCN6-208ENST00000494028 C10orf99Q6UWK7 81 aa8.15□□□□□ -1.1
CLCN6-208ENST00000494028 RNF182Q8N6D2 247 aa8.15□□□□□ -1.1
CLCN6-208ENST00000494028 OR2D3Q8NGH3 330 aa8.15□□□□□ -1.1
CLCN6-208ENST00000494028 OR10D4PQ8NGN7 298 aa8.15□□□□□ -1.1
CLCN6-208ENST00000494028 RBAKDNA6NC62 111 aa8.14□□□□□ -1.11
CLCN6-208ENST00000494028 ZNF705FA8MVS1 300 aaPredicted RBP8.14□□□□□ -1.11
CLCN6-208ENST00000494028 PRAC2D3DTV9 90 aa8.14□□□□□ -1.11
CLCN6-208ENST00000494028 F2Z2F3 143 aa8.14□□□□□ -1.11
CLCN6-208ENST00000494028 SMAD7O15105 426 aaKnown RBP8.14□□□□□ -1.11
CLCN6-208ENST00000494028 HOXA3O43365 443 aaPredicted RBP8.14□□□□□ -1.11
CLCN6-208ENST00000494028 SH2D1AO60880 128 aa8.14□□□□□ -1.11
CLCN6-208ENST00000494028 CRIP1P50238 77 aa8.14□□□□□ -1.11
CLCN6-208ENST00000494028 KRTAP1-1Q07627 177 aa8.14□□□□□ -1.11
CLCN6-208ENST00000494028 PYY3Q5JQD4 70 aa8.14□□□□□ -1.11
CLCN6-208ENST00000494028 FAM209BQ5JX69 171 aa8.14□□□□□ -1.11
CLCN6-208ENST00000494028 GPHB5Q86YW7 130 aa8.14□□□□□ -1.11
CLCN6-208ENST00000494028 MYOZ3Q8TDC0 251 aa8.14□□□□□ -1.11
CLCN6-208ENST00000494028 DAZAP1Q96EP5 407 aaKnown RBP8.14□□□□□ -1.11
CLCN6-208ENST00000494028 PACRGQ96M98 296 aaPredicted RBP8.14□□□□□ -1.11
CLCN6-208ENST00000494028 VGLL1Q99990 258 aa8.14□□□□□ -1.11
CLCN6-208ENST00000494028 NPFFR1Q9GZQ6 430 aa8.14□□□□□ -1.11
CLCN6-208ENST00000494028 FAM231BA6NCW3 169 aa8.13□□□□□ -1.11
CLCN6-208ENST00000494028 SOCS3O14543 225 aa8.13□□□□□ -1.11
CLCN6-208ENST00000494028 CT45A10P0DMU9 189 aa8.13□□□□□ -1.11
CLCN6-208ENST00000494028 GZMBP10144 247 aa8.13□□□□□ -1.11
CLCN6-208ENST00000494028 CRISP2P16562 243 aa8.13□□□□□ -1.11
CLCN6-208ENST00000494028 HBBP68871 147 aa8.13□□□□□ -1.11
CLCN6-208ENST00000494028 SLAQ13239 276 aa8.13□□□□□ -1.11
CLCN6-208ENST00000494028 LCN12Q6JVE5 192 aa8.13□□□□□ -1.11
CLCN6-208ENST00000494028 RBPMS2Q6ZRY4 209 aaKnown RBP8.13□□□□□ -1.11
CLCN6-208ENST00000494028 IL17RELQ6ZVW7 336 aa8.13□□□□□ -1.11
CLCN6-208ENST00000494028 TMEM256Q8N2U0 113 aa8.13□□□□□ -1.11
CLCN6-208ENST00000494028 PRR25Q96S07 402 aa8.13□□□□□ -1.11
CLCN6-208ENST00000494028 CSMD2Q7Z408 3487 aa8.13□□□□□ -1.11
CLCN6-208ENST00000494028 ESDP10768 282 aa8.12□□□□□ -1.11
CLCN6-208ENST00000494028 RAB4BP61018 213 aa8.12□□□□□ -1.11
CLCN6-208ENST00000494028 ERCC8Q13216 396 aa8.12□□□□□ -1.11
CLCN6-208ENST00000494028 KIAA1644Q3SXP7 199 aa8.12□□□□□ -1.11
CLCN6-208ENST00000494028 CDPF1Q6NVV7 123 aa8.12□□□□□ -1.11
CLCN6-208ENST00000494028 Q8N2B8 174 aa8.12□□□□□ -1.11
CLCN6-208ENST00000494028 SIGLECL1Q8N7X8 197 aa8.12□□□□□ -1.11
CLCN6-208ENST00000494028 PGLYRP4Q96LB8 373 aa8.12□□□□□ -1.11
CLCN6-208ENST00000494028 PEF1Q9UBV8 284 aaKnown RBP8.12□□□□□ -1.11
CLCN6-208ENST00000494028 IGHV7-4-1A0A0J9YVY3 117 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms