RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 BPIFA4PQ86YQ2 179 aa2.61□□□□□ -1.99
SMC2-205ENST00000493955 PXT1Q8NFP0 134 aa2.61□□□□□ -1.99
SMC2-205ENST00000493955 SPACA4Q8TDM5 124 aa2.61□□□□□ -1.99
SMC2-205ENST00000493955 C11orf40Q8WZ69 217 aa2.61□□□□□ -1.99
SMC2-205ENST00000493955 SCGB3A1Q96QR1 104 aa2.61□□□□□ -1.99
SMC2-205ENST00000493955 ENY2Q9NPA8 101 aa2.61□□□□□ -1.99
SMC2-205ENST00000493955 C8orf4Q9NR00 106 aa2.61□□□□□ -1.99
SMC2-205ENST00000493955 NBPF19A0A087WUL8 3843 aa2.6□□□□□ -1.99
SMC2-205ENST00000493955 MEIS3P1A6NDR6 274 aa2.6□□□□□ -1.99
SMC2-205ENST00000493955 TNFSF15O95150 251 aa2.6□□□□□ -1.99
SMC2-205ENST00000493955 TRGC1P0CF51 173 aa2.6□□□□□ -1.99
SMC2-205ENST00000493955 NEFHP12036 1026 aa2.6□□□□□ -1.99
SMC2-205ENST00000493955 G6PCP35575 357 aa2.6□□□□□ -1.99
SMC2-205ENST00000493955 C22orf39Q6P5X5 142 aa2.6□□□□□ -1.99
SMC2-205ENST00000493955 TMEM106AQ96A25 262 aa2.6□□□□□ -1.99
SMC2-205ENST00000493955 OPTCQ9UBM4 332 aa2.6□□□□□ -1.99
SMC2-205ENST00000493955 CYSLTR1Q9Y271 337 aa2.6□□□□□ -1.99
SMC2-205ENST00000493955 COL12A1Q99715 3063 aa2.6□□□□□ -1.99
SMC2-205ENST00000493955 UBR5O95071 2799 aaPredicted RBP2.6□□□□□ -1.99
SMC2-205ENST00000493955 RELNP78509 3460 aa2.6□□□□□ -1.99
SMC2-205ENST00000493955 MED13Q9UHV7 2174 aa2.6□□□□□ -1.99
SMC2-205ENST00000493955 SIGLEC16A6NMB1 481 aa2.59□□□□□ -1.99
SMC2-205ENST00000493955 BUB1B-PAK6H3BSN5 160 aa2.59□□□□□ -1.99
SMC2-205ENST00000493955 C1QCP02747 245 aa2.59□□□□□ -1.99
SMC2-205ENST00000493955 KRTAP12-3P60328 96 aa2.59□□□□□ -1.99
SMC2-205ENST00000493955 NDUFA5Q16718 116 aa2.59□□□□□ -1.99
SMC2-205ENST00000493955 TMEM155Q4W5P6 130 aa2.59□□□□□ -1.99
SMC2-205ENST00000493955 OR11H6Q8NGC7 330 aa2.59□□□□□ -1.99
SMC2-205ENST00000493955 TERB2Q8NHR7 220 aa2.59□□□□□ -1.99
SMC2-205ENST00000493955 CCL4L1Q8NHW4 92 aa2.59□□□□□ -1.99
SMC2-205ENST00000493955 GNPDA2Q8TDQ7 276 aa2.59□□□□□ -1.99
SMC2-205ENST00000493955 DNAJC9Q8WXX5 260 aa2.59□□□□□ -1.99
SMC2-205ENST00000493955 SLC39A9Q9NUM3 307 aa2.59□□□□□ -1.99
SMC2-205ENST00000493955 ARMC1Q9NVT9 282 aa2.59□□□□□ -1.99
SMC2-205ENST00000493955 BOD1L1Q8NFC6 3051 aa2.59□□□□□ -1.99
SMC2-205ENST00000493955 AHCTF1Q8WYP5 2266 aa2.59□□□□□ -1.99
SMC2-205ENST00000493955 NUP210LQ5VU65 1888 aa2.59□□□□□ -1.99
SMC2-205ENST00000493955 SPTY2D1-AS1A0A0U1RR47 76 aa2.59□□□□□ -2
SMC2-205ENST00000493955 PVALEFA0A1B0GWK0 134 aa2.59□□□□□ -2
SMC2-205ENST00000493955 ZNF860A6NHJ4 632 aa2.59□□□□□ -2
SMC2-205ENST00000493955 CCL4P13236 92 aa2.59□□□□□ -2
SMC2-205ENST00000493955 IFI30P13284 250 aa2.59□□□□□ -2
SMC2-205ENST00000493955 SNRPFP62306 86 aaKnown RBP2.59□□□□□ -2
SMC2-205ENST00000493955 CLVS1Q8IUQ0 354 aaPredicted RBP2.59□□□□□ -2
SMC2-205ENST00000493955 DEFB106AQ8N104 65 aa2.59□□□□□ -2
SMC2-205ENST00000493955 SLC25A40Q8TBP6 338 aa2.59□□□□□ -2
SMC2-205ENST00000493955 PATE1Q8WXA2 126 aa2.59□□□□□ -2
SMC2-205ENST00000493955 C2orf50Q96LR7 162 aa2.59□□□□□ -2
SMC2-205ENST00000493955 HSPB9Q9BQS6 159 aa2.59□□□□□ -2
SMC2-205ENST00000493955 PIEZO2Q9H5I5 2752 aa2.59□□□□□ -2
SMC2-205ENST00000493955 PARVBQ9HBI1 364 aa2.59□□□□□ -2
SMC2-205ENST00000493955 CCDC88CQ9P219 2028 aa2.59□□□□□ -2
SMC2-205ENST00000493955 HS3ST2Q9Y278 367 aa2.59□□□□□ -2
SMC2-205ENST00000493955 OVOL1O14753 267 aa2.58□□□□□ -2
SMC2-205ENST00000493955 OR2J2O76002 312 aa2.58□□□□□ -2
SMC2-205ENST00000493955 METTL15P1P0C7V9 234 aa2.58□□□□□ -2
SMC2-205ENST00000493955 SMIM17P0DL12 118 aa2.58□□□□□ -2
SMC2-205ENST00000493955 CDC42P60953 191 aa2.58□□□□□ -2
SMC2-205ENST00000493955 KRTAP13-4Q3LI77 160 aa2.58□□□□□ -2
SMC2-205ENST00000493955 DHRS4L2Q6PKH6 230 aa2.58□□□□□ -2
SMC2-205ENST00000493955 Q6Q795 121 aa2.58□□□□□ -2
SMC2-205ENST00000493955 MIR17HGQ75NE6 70 aa2.58□□□□□ -2
SMC2-205ENST00000493955 PFN4Q8NHR9 129 aa2.58□□□□□ -2
SMC2-205ENST00000493955 MRPL40Q9NQ50 206 aaKnown RBP2.58□□□□□ -2
SMC2-205ENST00000493955 TVP23BQ9NYZ1 205 aa2.58□□□□□ -2
SMC2-205ENST00000493955 BAIAP2Q9UQB8 552 aa2.58□□□□□ -2
SMC2-205ENST00000493955 ERGIC3Q9Y282 383 aa2.58□□□□□ -2
SMC2-205ENST00000493955 UTP20O75691 2785 aaKnown RBP2.57□□□□□ -2
SMC2-205ENST00000493955 ORC5O43913 435 aa2.57□□□□□ -2
SMC2-205ENST00000493955 ZNF737O75373 536 aa2.57□□□□□ -2
SMC2-205ENST00000493955 PAEPP09466 180 aa2.57□□□□□ -2
SMC2-205ENST00000493955 ERP29P30040 261 aaKnown RBP2.57□□□□□ -2
SMC2-205ENST00000493955 S100A5P33763 92 aa2.57□□□□□ -2
SMC2-205ENST00000493955 KRTAP12-1P59990 96 aa2.57□□□□□ -2
SMC2-205ENST00000493955 PCOTHQ58A44 107 aa2.57□□□□□ -2
SMC2-205ENST00000493955 OR8B3Q8NGG8 313 aa2.57□□□□□ -2
SMC2-205ENST00000493955 GINS4Q9BRT9 223 aa2.57□□□□□ -2
SMC2-205ENST00000493955 NBASA2RRP1 2371 aa2.56□□□□□ -2
SMC2-205ENST00000493955 S100A4P26447 101 aaKnown RBP2.56□□□□□ -2
SMC2-205ENST00000493955 DEFB109BQ30KR1 87 aa2.56□□□□□ -2
SMC2-205ENST00000493955 DHFR2Q86XF0 187 aa2.56□□□□□ -2
SMC2-205ENST00000493955 AP3S1Q92572 193 aa2.56□□□□□ -2
SMC2-205ENST00000493955 CKLFQ9UBR5 152 aa2.56□□□□□ -2
SMC2-205ENST00000493955 TLN1Q9Y490 2541 aaKnown RBP2.56□□□□□ -2
SMC2-205ENST00000493955 SNRNP200O75643 2136 aaKnown RBP2.56□□□□□ -2
SMC2-205ENST00000493955 ESPL1Q14674 2120 aa2.56□□□□□ -2
SMC2-205ENST00000493955 TEP1Q99973 2627 aaKnown RBP2.56□□□□□ -2
SMC2-205ENST00000493955 SPTA1P02549 2419 aa2.55□□□□□ -2
SMC2-205ENST00000493955 HIVEP3Q5T1R4 2406 aa2.55□□□□□ -2
SMC2-205ENST00000493955 USP9XQ93008 2570 aaPredicted RBP2.55□□□□□ -2
SMC2-205ENST00000493955 IGKV1-16P04430 117 aa2.55□□□□□ -2
SMC2-205ENST00000493955 DEFA3P59666 94 aa2.55□□□□□ -2
SMC2-205ENST00000493955 EIF3IQ13347 325 aaKnown RBP2.55□□□□□ -2
SMC2-205ENST00000493955 HIST3H2BBQ8N257 126 aa2.55□□□□□ -2
SMC2-205ENST00000493955 TEX15Q9BXT5 2789 aa2.54□□□□□ -2
SMC2-205ENST00000493955 SPTBP11277 2137 aa2.54□□□□□ -2
SMC2-205ENST00000493955 USP9YO00507 2555 aaPredicted RBP2.54□□□□□ -2
SMC2-205ENST00000493955 FLNCQ14315 2725 aa2.54□□□□□ -2
SMC2-205ENST00000493955 SDCBPO00560 298 aaPredicted RBP2.54□□□□□ -2
SMC2-205ENST00000493955 SULT1B1O43704 296 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms