RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 G3V3Q6 166 aa11.61□□□□□ -0.55
SATB1-217ENST00000493952 M0R3E3 92 aa11.61□□□□□ -0.55
SATB1-217ENST00000493952 INSP01308 110 aa11.61□□□□□ -0.55
SATB1-217ENST00000493952 PDE6HQ13956 83 aa11.61□□□□□ -0.55
SATB1-217ENST00000493952 FXYD5Q96DB9 178 aa11.61□□□□□ -0.55
SATB1-217ENST00000493952 PPP1R14DQ9NXH3 145 aa11.61□□□□□ -0.55
SATB1-217ENST00000493952 TIMM9Q9Y5J7 89 aa11.61□□□□□ -0.55
SATB1-217ENST00000493952 RNF222A6NCQ9 220 aa11.6□□□□□ -0.55
SATB1-217ENST00000493952 OR10J4P0C629 311 aa11.6□□□□□ -0.55
SATB1-217ENST00000493952 NBEAP1P0C6P0 100 aa11.6□□□□□ -0.55
SATB1-217ENST00000493952 ZNF266Q14584 549 aa11.6□□□□□ -0.55
SATB1-217ENST00000493952 EXOC3-AS1Q8N2X6 119 aa11.6□□□□□ -0.55
SATB1-217ENST00000493952 OR10J6PQ8NGY7 276 aa11.6□□□□□ -0.55
SATB1-217ENST00000493952 ZNF503Q96F45 646 aa11.6□□□□□ -0.55
SATB1-217ENST00000493952 TMEM208Q9BTX3 173 aa11.6□□□□□ -0.55
SATB1-217ENST00000493952 PAXXQ9BUH6 204 aa11.6□□□□□ -0.55
SATB1-217ENST00000493952 KLK5Q9Y337 293 aaPredicted RBP11.6□□□□□ -0.55
SATB1-217ENST00000493952 FXYD6-FXYD2A0A087WZ82 144 aa11.59□□□□□ -0.55
SATB1-217ENST00000493952 OR7C2O60412 319 aa11.59□□□□□ -0.55
SATB1-217ENST00000493952 EIF3GO75821 320 aaKnown RBP eCLIP11.59□□□□□ -0.55
SATB1-217ENST00000493952 JTBO76095 146 aa11.59□□□□□ -0.55
SATB1-217ENST00000493952 EMP1P54849 157 aa11.59□□□□□ -0.55
SATB1-217ENST00000493952 HSD17B11Q8NBQ5 300 aa11.59□□□□□ -0.55
SATB1-217ENST00000493952 INO80EQ8NBZ0 244 aaPredicted RBP11.59□□□□□ -0.55
SATB1-217ENST00000493952 RNF141Q8WVD5 230 aa11.59□□□□□ -0.55
SATB1-217ENST00000493952 MRPL53Q96EL3 112 aaKnown RBP11.59□□□□□ -0.55
SATB1-217ENST00000493952 TNFSF18Q9UNG2 199 aa11.59□□□□□ -0.55
SATB1-217ENST00000493952 ALMS1Q8TCU4 4167 aa11.59□□□□□ -0.55
SATB1-217ENST00000493952 TMEM189A5PLL7 270 aa11.58□□□□□ -0.56
SATB1-217ENST00000493952 NPIPB6E9PJ23 425 aa11.58□□□□□ -0.56
SATB1-217ENST00000493952 HBE1P02100 147 aa11.58□□□□□ -0.56
SATB1-217ENST00000493952 CDKN1BP46527 198 aa11.58□□□□□ -0.56
SATB1-217ENST00000493952 RAB2AP61019 212 aa11.58□□□□□ -0.56
SATB1-217ENST00000493952 ICAM4Q14773 271 aa11.58□□□□□ -0.56
SATB1-217ENST00000493952 RRN3P1Q2M238 152 aa11.58□□□□□ -0.56
SATB1-217ENST00000493952 KHDC3LQ587J8 217 aa11.58□□□□□ -0.56
SATB1-217ENST00000493952 Q6ZTC4 211 aa11.58□□□□□ -0.56
SATB1-217ENST00000493952 ZNF767PQ75MW2 155 aa11.58□□□□□ -0.56
SATB1-217ENST00000493952 RPP25LQ8N5L8 163 aaKnown RBP11.58□□□□□ -0.56
SATB1-217ENST00000493952 PHYHIPLQ96FC7 376 aa11.58□□□□□ -0.56
SATB1-217ENST00000493952 AAMDCQ9H7C9 122 aa11.58□□□□□ -0.56
SATB1-217ENST00000493952 PRELID1Q9Y255 219 aa11.58□□□□□ -0.56
SATB1-217ENST00000493952 LOC102723971A0A1B0GUV8 181 aa11.57□□□□□ -0.56
SATB1-217ENST00000493952 PRM2P04554 102 aa11.57□□□□□ -0.56
SATB1-217ENST00000493952 M6PRP20645 277 aa11.57□□□□□ -0.56
SATB1-217ENST00000493952 UBE2L3P68036 154 aaKnown RBP11.57□□□□□ -0.56
SATB1-217ENST00000493952 KIR3DS1Q14943 382 aa11.57□□□□□ -0.56
SATB1-217ENST00000493952 C12orf74Q32Q52 190 aa11.57□□□□□ -0.56
SATB1-217ENST00000493952 ACOT6Q3I5F7 207 aaPredicted RBP11.57□□□□□ -0.56
SATB1-217ENST00000493952 RYR2Q92736 4967 aa11.57□□□□□ -0.56
SATB1-217ENST00000493952 ZNF705GA8MUZ8 300 aaPredicted RBP11.56□□□□□ -0.56
SATB1-217ENST00000493952 CT45A10P0DMU9 189 aa11.56□□□□□ -0.56
SATB1-217ENST00000493952 ATP6V0CP27449 155 aa11.56□□□□□ -0.56
SATB1-217ENST00000493952 TAS2R45P59539 299 aa11.56□□□□□ -0.56
SATB1-217ENST00000493952 FAM122CQ6P4D5 195 aa11.56□□□□□ -0.56
SATB1-217ENST00000493952 OR2G3Q8NGZ4 309 aa11.56□□□□□ -0.56
SATB1-217ENST00000493952 PSMG3Q9BT73 122 aaPredicted RBP11.56□□□□□ -0.56
SATB1-217ENST00000493952 C11orf94C9JXX5 98 aa11.55□□□□□ -0.56
SATB1-217ENST00000493952 SMLR1H3BR10 107 aa11.55□□□□□ -0.56
SATB1-217ENST00000493952 ERCC8Q13216 396 aa11.55□□□□□ -0.56
SATB1-217ENST00000493952 FAM222AQ5U5X8 452 aa11.55□□□□□ -0.56
SATB1-217ENST00000493952 GFI1BQ5VTD9 330 aa11.55□□□□□ -0.56
SATB1-217ENST00000493952 RPL7L1Q6DKI1 246 aaKnown RBP11.55□□□□□ -0.56
SATB1-217ENST00000493952 OR10G4Q8NGN3 311 aa11.55□□□□□ -0.56
SATB1-217ENST00000493952 OR10G9Q8NGN4 311 aa11.55□□□□□ -0.56
SATB1-217ENST00000493952 OR10G7Q8NGN6 311 aa11.55□□□□□ -0.56
SATB1-217ENST00000493952 C2CD4CQ8TF44 421 aa11.55□□□□□ -0.56
SATB1-217ENST00000493952 ODF3Q96PU9 254 aa11.55□□□□□ -0.56
SATB1-217ENST00000493952 LINC01587Q99440 93 aa11.55□□□□□ -0.56
SATB1-217ENST00000493952 SH3BGRL3Q9H299 93 aa11.55□□□□□ -0.56
SATB1-217ENST00000493952 DKK2Q9UBU2 259 aa11.55□□□□□ -0.56
SATB1-217ENST00000493952 YTHDF2Q9Y5A9 579 aaKnown RBP11.55□□□□□ -0.56
SATB1-217ENST00000493952 DNAH1Q9P2D7 4330 aa11.55□□□□□ -0.56
SATB1-217ENST00000493952 IGKV2-40A0A087WW87 121 aaPredicted RBP11.54□□□□□ -0.56
SATB1-217ENST00000493952 TRAV10A0A0B4J240 114 aa11.54□□□□□ -0.56
SATB1-217ENST00000493952 A0A1W2PPV4 95 aa11.54□□□□□ -0.56
SATB1-217ENST00000493952 J3KRW8 73 aa11.54□□□□□ -0.56
SATB1-217ENST00000493952 ARPC5O15511 151 aa11.54□□□□□ -0.56
SATB1-217ENST00000493952 IGKV2D-40P01614 121 aaPredicted RBP11.54□□□□□ -0.56
SATB1-217ENST00000493952 SPART-AS1P0CW21 52 aa11.54□□□□□ -0.56
SATB1-217ENST00000493952 TSPOP30536 169 aa11.54□□□□□ -0.56
SATB1-217ENST00000493952 RANP62826 216 aaKnown RBP11.54□□□□□ -0.56
SATB1-217ENST00000493952 TMEM256Q8N2U0 113 aa11.54□□□□□ -0.56
SATB1-217ENST00000493952 LINC00476Q8WZB0 136 aa11.54□□□□□ -0.56
SATB1-217ENST00000493952 AGPAT4-IT1Q9H0P7 198 aa11.54□□□□□ -0.56
SATB1-217ENST00000493952 HMGB3O15347 200 aaKnown RBP11.53□□□□□ -0.56
SATB1-217ENST00000493952 AZU1P20160 251 aa11.53□□□□□ -0.56
SATB1-217ENST00000493952 LEPP41159 167 aa11.53□□□□□ -0.56
SATB1-217ENST00000493952 C9orf47Q6ZRZ4 202 aa11.53□□□□□ -0.56
SATB1-217ENST00000493952 C20orf144Q9BQM9 153 aa11.53□□□□□ -0.56
SATB1-217ENST00000493952 Q9H3A6 140 aa11.53□□□□□ -0.56
SATB1-217ENST00000493952 PLA2G2EQ9NZK7 142 aa11.53□□□□□ -0.56
SATB1-217ENST00000493952 TEX48A0A1B0GUV7 120 aa11.52□□□□□ -0.57
SATB1-217ENST00000493952 CDC34P49427 236 aaPredicted RBP11.52□□□□□ -0.57
SATB1-217ENST00000493952 TAS2R60P59551 318 aa11.52□□□□□ -0.57
SATB1-217ENST00000493952 SERF2P84101 59 aa11.52□□□□□ -0.57
SATB1-217ENST00000493952 PQLC2Q6ZP29 291 aa11.52□□□□□ -0.57
SATB1-217ENST00000493952 LYPD1Q8N2G4 141 aa11.52□□□□□ -0.57
SATB1-217ENST00000493952 FAM19A4Q96LR4 140 aa11.52□□□□□ -0.57
SATB1-217ENST00000493952 LINC00477Q96M19 166 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms