RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 FOXA3P55318 350 aaPredicted RBP8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 TCL1AP56279 114 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 RBX1P62877 108 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 SEC11AP67812 179 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 FAM53AQ6NSI3 398 aaPredicted RBP8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 RNASEKQ6P5S7 137 aaKnown RBP8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 ZNF788Q6ZQV5 615 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 S100A7AQ86SG5 101 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 DEFB125Q8N687 156 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 OR4C13Q8NGP0 309 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 FXYD5Q96DB9 178 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 MAP1LC3CQ9BXW4 147 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 ZNF355PQ9NSJ1 428 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 EPDR1Q9UM22 224 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 C19orf71A6NCJ1 209 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 OR4C46A6NHA9 309 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 SRRM4A7MD48 611 aaKnown RBP8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 SYS1-DBNDD2H3BUS1 97 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 CCL25O15444 150 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 LEPROTL1O95214 131 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 LTAP01374 205 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 SAA1P0DJI8 122 aaPredicted RBP8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 CT45A6P0DMU7 189 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 CT45A5P0DMU8 189 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 CT45A7P0DMV0 189 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 IGLL1P15814 213 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 MC5RP33032 325 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 TFPI2P48307 235 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 PAX8Q06710 450 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 LTC4SQ16873 150 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 KIAA1644Q3SXP7 199 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 EBLN2Q6P2I7 272 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 SRSF8Q9BRL6 282 aaKnown RBP8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 DCTN5Q9BTE1 182 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 TMEM14CQ9P0S9 112 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 DNAH7Q8WXX0 4024 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 FBLL1A6NHQ2 334 aaKnown RBP8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 P01737 135 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 CRYGCP07315 174 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 LGALS7P47929 136 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 LINC00205P59089 165 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 DEFB112Q30KQ8 113 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 VMA21Q3ZAQ7 101 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 C16orf54Q6UWD8 224 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 Q6YL49 198 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 OR1N2Q8NGR9 330 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 OR9G1Q8NH87 305 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 TNFRSF14Q92956 283 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 DAZAP1Q96EP5 407 aaKnown RBP8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 HARBI1Q96MB7 349 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 GAFA1Q96PS6 74 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 HINT2Q9BX68 163 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 NPFFR1Q9GZQ6 430 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 WNT10AQ9GZT5 417 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 OTORQ9NRC9 128 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 DNAH1Q9P2D7 4330 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 STAB2Q8WWQ8 2551 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 LOC102724200A0A096LPH7 203 aaPredicted RBP8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 SERTM2A0A1B0GWG4 89 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 K7ERU9 68 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 FSTL3O95633 263 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 FRMD6-AS1P0C7T7 363 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 CSN1S1P47710 185 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 HINT1P49773 126 aaPredicted RBP8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 Q56UQ5 140 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 LINC01545Q5VT33 79 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 MOGAT3Q86VF5 341 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 LYPD1Q8N2G4 141 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 FAM19A2Q8N3H0 131 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 H1FXQ92522 213 aaKnown RBP8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 FLYWCH2Q96CP2 140 aaKnown RBP8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 KRTAP4-8Q9BYQ9 185 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 PEF1Q9UBV8 284 aaKnown RBP8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 WASHC3Q9Y3C0 194 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 IGHV1-24A0A0C4DH33 117 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 CHEK1O14757 476 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 SIVA1O15304 175 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 SLC25A5P05141 298 aaKnown RBP8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 TNFRSF1AP19438 455 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 RIGQ13278 110 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 TEX45Q8NA69 505 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 TMEM116Q8NCL8 245 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 ZNRF1Q8ND25 227 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 CCL17Q92583 94 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 C16orf95Q9H693 158 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 SCRT2Q9NQ03 307 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 IGKV1D-37A0A075B6S9 117 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 K7EQM0 130 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 SPRY3O43610 288 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 SPINK4O60575 86 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 TCRAP04437 139 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 NBEAP1P0C6P0 100 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 GNG10P50151 68 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 ARF6P62330 175 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 SLC35B1P78383 322 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 VAMP3Q15836 100 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 OXLD1Q5BKU9 147 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 BVES-AS1Q5T3Y7 98 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 GDF5OSQ5U4N7 250 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms