RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 FOXA3P55318 350 aaPredicted RBP8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 TCL1AP56279 114 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 RBX1P62877 108 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 SEC11AP67812 179 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 FAM53AQ6NSI3 398 aaPredicted RBP8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 RNASEKQ6P5S7 137 aaKnown RBP8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 ZNF788Q6ZQV5 615 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 S100A7AQ86SG5 101 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 DEFB125Q8N687 156 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 OR4C13Q8NGP0 309 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 FXYD5Q96DB9 178 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 MAP1LC3CQ9BXW4 147 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 ZNF355PQ9NSJ1 428 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 EPDR1Q9UM22 224 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 C19orf71A6NCJ1 209 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 OR4C46A6NHA9 309 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 SRRM4A7MD48 611 aaKnown RBP8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 SYS1-DBNDD2H3BUS1 97 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 CCL25O15444 150 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 LEPROTL1O95214 131 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 LTAP01374 205 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 SAA1P0DJI8 122 aaPredicted RBP8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 CT45A6P0DMU7 189 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 CT45A5P0DMU8 189 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 CT45A7P0DMV0 189 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 IGLL1P15814 213 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 MC5RP33032 325 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 TFPI2P48307 235 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 PAX8Q06710 450 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 LTC4SQ16873 150 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 KIAA1644Q3SXP7 199 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 EBLN2Q6P2I7 272 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 SRSF8Q9BRL6 282 aaKnown RBP8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 DCTN5Q9BTE1 182 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 TMEM14CQ9P0S9 112 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 DNAH7Q8WXX0 4024 aa8.35□□□□□ -1.07
PDLIM1-205ENST00000493949 FBLL1A6NHQ2 334 aaKnown RBP8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 P01737 135 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 CRYGCP07315 174 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 LGALS7P47929 136 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 LINC00205P59089 165 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 DEFB112Q30KQ8 113 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 VMA21Q3ZAQ7 101 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 C16orf54Q6UWD8 224 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 Q6YL49 198 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 OR1N2Q8NGR9 330 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 OR9G1Q8NH87 305 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 TNFRSF14Q92956 283 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 DAZAP1Q96EP5 407 aaKnown RBP8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 HARBI1Q96MB7 349 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 GAFA1Q96PS6 74 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 HINT2Q9BX68 163 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 NPFFR1Q9GZQ6 430 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 WNT10AQ9GZT5 417 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 OTORQ9NRC9 128 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 DNAH1Q9P2D7 4330 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 STAB2Q8WWQ8 2551 aa8.34□□□□□ -1.07
PDLIM1-205ENST00000493949 LOC102724200A0A096LPH7 203 aaPredicted RBP8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 SERTM2A0A1B0GWG4 89 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 K7ERU9 68 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 FSTL3O95633 263 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 FRMD6-AS1P0C7T7 363 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 CSN1S1P47710 185 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 HINT1P49773 126 aaPredicted RBP8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 Q56UQ5 140 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 LINC01545Q5VT33 79 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 MOGAT3Q86VF5 341 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 LYPD1Q8N2G4 141 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 FAM19A2Q8N3H0 131 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 H1FXQ92522 213 aaKnown RBP8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 FLYWCH2Q96CP2 140 aaKnown RBP8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 KRTAP4-8Q9BYQ9 185 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 PEF1Q9UBV8 284 aaKnown RBP8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 WASHC3Q9Y3C0 194 aa8.33□□□□□ -1.08
PDLIM1-205ENST00000493949 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 IGHV1-24A0A0C4DH33 117 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 CHEK1O14757 476 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 SIVA1O15304 175 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 SLC25A5P05141 298 aaKnown RBP8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 TNFRSF1AP19438 455 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 RIGQ13278 110 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 TEX45Q8NA69 505 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 TMEM116Q8NCL8 245 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 ZNRF1Q8ND25 227 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 CCL17Q92583 94 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 C16orf95Q9H693 158 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 SCRT2Q9NQ03 307 aa8.32□□□□□ -1.08
PDLIM1-205ENST00000493949 IGKV1D-37A0A075B6S9 117 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 K7EQM0 130 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 SPRY3O43610 288 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 SPINK4O60575 86 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 TCRAP04437 139 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 NBEAP1P0C6P0 100 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 GNG10P50151 68 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 ARF6P62330 175 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 SLC35B1P78383 322 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 VAMP3Q15836 100 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 OXLD1Q5BKU9 147 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 BVES-AS1Q5T3Y7 98 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 GDF5OSQ5U4N7 250 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms