RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 TIMM8BQ9Y5J9 83 aaPredicted RBP16.68■□□□□ 0.26
RHBDD3-206ENST00000493894 FAM3BP58499 235 aaPredicted RBP16.67■□□□□ 0.26
RHBDD3-206ENST00000493894 HBG1P69891 147 aa16.67■□□□□ 0.26
RHBDD3-206ENST00000493894 HBG2P69892 147 aa16.67■□□□□ 0.26
RHBDD3-206ENST00000493894 BAXQ07812 192 aa16.67■□□□□ 0.26
RHBDD3-206ENST00000493894 GUK1Q16774 197 aa16.67■□□□□ 0.26
RHBDD3-206ENST00000493894 SOHLH1Q5JUK2 328 aa16.67■□□□□ 0.26
RHBDD3-206ENST00000493894 ATG101Q9BSB4 218 aa16.67■□□□□ 0.26
RHBDD3-206ENST00000493894 PKHD1P08F94 4074 aa16.66■□□□□ 0.26
RHBDD3-206ENST00000493894 FAM240BA0A1B0GVZ2 78 aa16.66■□□□□ 0.26
RHBDD3-206ENST00000493894 H3BQ15 152 aa16.66■□□□□ 0.26
RHBDD3-206ENST00000493894 S100A11P31949 105 aa16.66■□□□□ 0.26
RHBDD3-206ENST00000493894 RNASE8Q8TDE3 154 aaKnown RBP16.66■□□□□ 0.26
RHBDD3-206ENST00000493894 NACAE9PAV3 2078 aa16.65■□□□□ 0.26
RHBDD3-206ENST00000493894 IGSF23A1L1A6 192 aa16.65■□□□□ 0.26
RHBDD3-206ENST00000493894 CBY3A6NI87 242 aa16.65■□□□□ 0.26
RHBDD3-206ENST00000493894 PRAC2D3DTV9 90 aa16.65■□□□□ 0.26
RHBDD3-206ENST00000493894 RPL29P47914 159 aaKnown RBP16.65■□□□□ 0.26
RHBDD3-206ENST00000493894 RAB32Q13637 225 aa16.65■□□□□ 0.26
RHBDD3-206ENST00000493894 TMEM252Q8N6L7 170 aa16.65■□□□□ 0.26
RHBDD3-206ENST00000493894 SAT2Q96F10 170 aaPredicted RBP16.65■□□□□ 0.26
RHBDD3-206ENST00000493894 PARD6GQ9BYG4 376 aaPredicted RBP16.65■□□□□ 0.26
RHBDD3-206ENST00000493894 SLC39A9Q9NUM3 307 aa16.65■□□□□ 0.26
RHBDD3-206ENST00000493894 TRAV5A0A0B4J249 113 aa16.64■□□□□ 0.25
RHBDD3-206ENST00000493894 NUDT3O95989 172 aa16.64■□□□□ 0.25
RHBDD3-206ENST00000493894 GFI1BQ5VTD9 330 aa16.64■□□□□ 0.25
RHBDD3-206ENST00000493894 MZT2BQ6NZ67 158 aa16.64■□□□□ 0.25
RHBDD3-206ENST00000493894 NOP10Q9NPE3 64 aaKnown RBP16.64■□□□□ 0.25
RHBDD3-206ENST00000493894 FGF7P21781 194 aa16.63■□□□□ 0.25
RHBDD3-206ENST00000493894 IL15RAQ13261 267 aa16.63■□□□□ 0.25
RHBDD3-206ENST00000493894 KIR3DS1Q14943 382 aa16.63■□□□□ 0.25
RHBDD3-206ENST00000493894 CCDC28AQ8IWP9 274 aa16.63■□□□□ 0.25
RHBDD3-206ENST00000493894 ODF3Q96PU9 254 aa16.63■□□□□ 0.25
RHBDD3-206ENST00000493894 ZNF253O75346 499 aa16.62■□□□□ 0.25
RHBDD3-206ENST00000493894 LEPP41159 167 aa16.62■□□□□ 0.25
RHBDD3-206ENST00000493894 ATP6V1FQ16864 119 aa16.62■□□□□ 0.25
RHBDD3-206ENST00000493894 LINC00299Q6ZSB3 139 aa16.62■□□□□ 0.25
RHBDD3-206ENST00000493894 GPN1Q9HCN4 374 aaPredicted RBP16.62■□□□□ 0.25
RHBDD3-206ENST00000493894 ZNF586Q9NXT0 402 aa16.62■□□□□ 0.25
RHBDD3-206ENST00000493894 PCLOQ9Y6V0 5065 aa16.61■□□□□ 0.25
RHBDD3-206ENST00000493894 NPIPB6E9PJ23 425 aa16.61■□□□□ 0.25
RHBDD3-206ENST00000493894 C1orf134Q5TEV5 83 aa16.61■□□□□ 0.25
RHBDD3-206ENST00000493894 CHAC2Q8WUX2 184 aa16.61■□□□□ 0.25
RHBDD3-206ENST00000493894 J3KRW8 73 aa16.6■□□□□ 0.25
RHBDD3-206ENST00000493894 ASAH1Q13510 395 aa16.6■□□□□ 0.25
RHBDD3-206ENST00000493894 S100ZQ8WXG8 99 aa16.6■□□□□ 0.25
RHBDD3-206ENST00000493894 MRPL53Q96EL3 112 aaKnown RBP16.6■□□□□ 0.25
RHBDD3-206ENST00000493894 TRBV19A0A075B6N1 114 aa16.59■□□□□ 0.25
RHBDD3-206ENST00000493894 MPDU1O75352 247 aa16.59■□□□□ 0.25
RHBDD3-206ENST00000493894 CCL18P55774 89 aa16.59■□□□□ 0.25
RHBDD3-206ENST00000493894 RNF141Q8WVD5 230 aa16.59■□□□□ 0.25
RHBDD3-206ENST00000493894 KRTAP17-1Q9BYP8 105 aa16.59■□□□□ 0.25
RHBDD3-206ENST00000493894 TMEM14CQ9P0S9 112 aa16.59■□□□□ 0.25
RHBDD3-206ENST00000493894 SNURFLB1AK76 121 aa16.58■□□□□ 0.24
RHBDD3-206ENST00000493894 RLN2P04090 185 aa16.58■□□□□ 0.24
RHBDD3-206ENST00000493894 CT45A10P0DMU9 189 aa16.58■□□□□ 0.24
RHBDD3-206ENST00000493894 ENKURQ8TC29 256 aa16.58■□□□□ 0.24
RHBDD3-206ENST00000493894 DYNC1H1Q14204 4646 aaKnown RBP16.57■□□□□ 0.24
RHBDD3-206ENST00000493894 TRAV12-3A0A0B4J271 114 aa16.57■□□□□ 0.24
RHBDD3-206ENST00000493894 MED14OSP0DP75 135 aa16.57■□□□□ 0.24
RHBDD3-206ENST00000493894 PDE6HQ13956 83 aa16.57■□□□□ 0.24
RHBDD3-206ENST00000493894 PYGO2Q9BRQ0 406 aa16.57■□□□□ 0.24
RHBDD3-206ENST00000493894 NPCDR1Q9BY65 106 aa16.57■□□□□ 0.24
RHBDD3-206ENST00000493894 TIMM9Q9Y5J7 89 aa16.57■□□□□ 0.24
RHBDD3-206ENST00000493894 PKD1P98161 4303 aa16.56■□□□□ 0.24
RHBDD3-206ENST00000493894 M0R3E3 92 aa16.56■□□□□ 0.24
RHBDD3-206ENST00000493894 HIST1H1EP10412 219 aaKnown RBP16.56■□□□□ 0.24
RHBDD3-206ENST00000493894 CLINT1Q14677 625 aa16.56■□□□□ 0.24
RHBDD3-206ENST00000493894 LINC00612Q8N6U2 182 aa16.56■□□□□ 0.24
RHBDD3-206ENST00000493894 ZNRF2Q8NHG8 242 aa16.56■□□□□ 0.24
RHBDD3-206ENST00000493894 PRELID1Q9Y255 219 aa16.56■□□□□ 0.24
RHBDD3-206ENST00000493894 DNAH11Q96DT5 4516 aa16.56■□□□□ 0.24
RHBDD3-206ENST00000493894 NBDYA0A0U1RRE5 68 aa16.55■□□□□ 0.24
RHBDD3-206ENST00000493894 GAGE12BA1L429 117 aa16.55■□□□□ 0.24
RHBDD3-206ENST00000493894 GAGE7O76087 117 aa16.55■□□□□ 0.24
RHBDD3-206ENST00000493894 GAGE12FP0CL80 117 aa16.55■□□□□ 0.24
RHBDD3-206ENST00000493894 GAGE12GP0CL81 117 aa16.55■□□□□ 0.24
RHBDD3-206ENST00000493894 GAGE12IP0CL82 117 aa16.55■□□□□ 0.24
RHBDD3-206ENST00000493894 PYYP10082 97 aa16.55■□□□□ 0.24
RHBDD3-206ENST00000493894 NDUFB4O95168 129 aa16.54■□□□□ 0.24
RHBDD3-206ENST00000493894 SLC25A5P05141 298 aaKnown RBP16.54■□□□□ 0.24
RHBDD3-206ENST00000493894 OR5I1Q13606 314 aa16.54■□□□□ 0.24
RHBDD3-206ENST00000493894 OR5C1Q8NGR4 320 aa16.54■□□□□ 0.24
RHBDD3-206ENST00000493894 THAP6Q8TBB0 222 aa16.54■□□□□ 0.24
RHBDD3-206ENST00000493894 GNPNAT1Q96EK6 184 aaPredicted RBP16.54■□□□□ 0.24
RHBDD3-206ENST00000493894 SLC25A31Q9H0C2 315 aa16.54■□□□□ 0.24
RHBDD3-206ENST00000493894 AAMDCQ9H7C9 122 aa16.54■□□□□ 0.24
RHBDD3-206ENST00000493894 LINC00588Q9Y4M8 146 aa16.54■□□□□ 0.24
RHBDD3-206ENST00000493894 M6PRP20645 277 aa16.53■□□□□ 0.24
RHBDD3-206ENST00000493894 NHLH2Q02577 135 aa16.53■□□□□ 0.24
RHBDD3-206ENST00000493894 GCSAMLQ5JQS6 135 aa16.53■□□□□ 0.24
RHBDD3-206ENST00000493894 BLNKQ8WV28 456 aa16.53■□□□□ 0.24
RHBDD3-206ENST00000493894 TRAV26-1A0A087WT03 109 aa16.52■□□□□ 0.24
RHBDD3-206ENST00000493894 C7orf71A4D174 169 aa16.52■□□□□ 0.24
RHBDD3-206ENST00000493894 E5RGE8 158 aa16.52■□□□□ 0.24
RHBDD3-206ENST00000493894 SIX6O95475 246 aa16.52■□□□□ 0.24
RHBDD3-206ENST00000493894 ERCC8Q13216 396 aa16.52■□□□□ 0.24
RHBDD3-206ENST00000493894 LRRC37A5PQ49AS3 106 aa16.52■□□□□ 0.24
RHBDD3-206ENST00000493894 SLC25A2Q9BXI2 301 aa16.52■□□□□ 0.24
RHBDD3-206ENST00000493894 NMES1Q9C002 83 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms