RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 IGF2BP2-AS1Q96M15 143 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 GPN1Q9HCN4 374 aaPredicted RBP7.61□□□□□ -1.19
COL6A3-214ENST00000493608 PPP1R14DQ9NXH3 145 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 PTTG2Q9NZH5 202 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 DKK2Q9UBU2 259 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 WDR83OSQ9Y284 106 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 TMEM189A5PLL7 270 aa7.6□□□□□ -1.19
COL6A3-214ENST00000493608 PRAC2D3DTV9 90 aa7.6□□□□□ -1.19
COL6A3-214ENST00000493608 INMT-MINDY4F8WBC2 141 aa7.6□□□□□ -1.19
COL6A3-214ENST00000493608 H3BQ15 152 aa7.6□□□□□ -1.19
COL6A3-214ENST00000493608 SLC17A3O00476 420 aa7.6□□□□□ -1.19
COL6A3-214ENST00000493608 FGF7P21781 194 aa7.6□□□□□ -1.19
COL6A3-214ENST00000493608 S100A11P31949 105 aa7.6□□□□□ -1.19
COL6A3-214ENST00000493608 TCTAP57738 103 aa7.6□□□□□ -1.19
COL6A3-214ENST00000493608 LRRC37A5PQ49AS3 106 aa7.6□□□□□ -1.19
COL6A3-214ENST00000493608 STX12Q86Y82 276 aa7.6□□□□□ -1.19
COL6A3-214ENST00000493608 PARD6GQ9BYG4 376 aaPredicted RBP7.6□□□□□ -1.19
COL6A3-214ENST00000493608 ZNF331Q9NQX6 463 aaPredicted RBP7.6□□□□□ -1.19
COL6A3-214ENST00000493608 SLC39A9Q9NUM3 307 aa7.6□□□□□ -1.19
COL6A3-214ENST00000493608 YTHDF2Q9Y5A9 579 aaKnown RBP7.6□□□□□ -1.19
COL6A3-214ENST00000493608 FRAS1Q86XX4 4008 aa7.6□□□□□ -1.19
COL6A3-214ENST00000493608 H0YIZ8 118 aa7.59□□□□□ -1.19
COL6A3-214ENST00000493608 INSP01308 110 aa7.59□□□□□ -1.19
COL6A3-214ENST00000493608 HTN1P15515 57 aa7.59□□□□□ -1.19
COL6A3-214ENST00000493608 AZU1P20160 251 aa7.59□□□□□ -1.19
COL6A3-214ENST00000493608 B2MP61769 119 aa7.59□□□□□ -1.19
COL6A3-214ENST00000493608 HBG1P69891 147 aa7.59□□□□□ -1.19
COL6A3-214ENST00000493608 HBG2P69892 147 aa7.59□□□□□ -1.19
COL6A3-214ENST00000493608 VWC2Q2TAL6 325 aa7.59□□□□□ -1.19
COL6A3-214ENST00000493608 LCN15Q6UWW0 184 aa7.59□□□□□ -1.19
COL6A3-214ENST00000493608 OR1L4Q8NGR5 311 aa7.59□□□□□ -1.19
COL6A3-214ENST00000493608 LINC01587Q99440 93 aa7.59□□□□□ -1.19
COL6A3-214ENST00000493608 NIPSNAP3BQ9BS92 247 aa7.59□□□□□ -1.19
COL6A3-214ENST00000493608 RNF126Q9BV68 326 aa7.59□□□□□ -1.19
COL6A3-214ENST00000493608 KRTAP9-3Q9BYQ3 159 aa7.59□□□□□ -1.19
COL6A3-214ENST00000493608 OR5AC2Q9NZP5 309 aa7.59□□□□□ -1.19
COL6A3-214ENST00000493608 VPS13DQ5THJ4 4388 aa7.58□□□□□ -1.2
COL6A3-214ENST00000493608 BOLA2-SMG1P6H3BVE0 249 aa7.58□□□□□ -1.2
COL6A3-214ENST00000493608 AMBPP02760 352 aa7.58□□□□□ -1.2
COL6A3-214ENST00000493608 RLN2P04090 185 aa7.58□□□□□ -1.2
COL6A3-214ENST00000493608 IGLC2P0DOY2 106 aa7.58□□□□□ -1.2
COL6A3-214ENST00000493608 RPL29P47914 159 aaKnown RBP7.58□□□□□ -1.2
COL6A3-214ENST00000493608 FCN2Q15485 313 aa7.58□□□□□ -1.2
COL6A3-214ENST00000493608 ATP6V1FQ16864 119 aa7.58□□□□□ -1.2
COL6A3-214ENST00000493608 GCSAMLQ5JQS6 135 aa7.58□□□□□ -1.2
COL6A3-214ENST00000493608 THAP6Q8TBB0 222 aa7.58□□□□□ -1.2
COL6A3-214ENST00000493608 SAT2Q96F10 170 aaPredicted RBP7.58□□□□□ -1.2
COL6A3-214ENST00000493608 SLC50A1Q9BRV3 221 aa7.58□□□□□ -1.2
COL6A3-214ENST00000493608 NMES1Q9C002 83 aa7.58□□□□□ -1.2
COL6A3-214ENST00000493608 ZNF586Q9NXT0 402 aa7.58□□□□□ -1.2
COL6A3-214ENST00000493608 RNF24Q9Y225 148 aa7.58□□□□□ -1.2
COL6A3-214ENST00000493608 PXMP4Q9Y6I8 212 aa7.58□□□□□ -1.2
COL6A3-214ENST00000493608 J3KRW8 73 aa7.57□□□□□ -1.2
COL6A3-214ENST00000493608 CXCL2P19875 107 aa7.57□□□□□ -1.2
COL6A3-214ENST00000493608 H2BFSP57053 126 aa7.57□□□□□ -1.2
COL6A3-214ENST00000493608 DAD1P61803 113 aa7.57□□□□□ -1.2
COL6A3-214ENST00000493608 CLINT1Q14677 625 aa7.57□□□□□ -1.2
COL6A3-214ENST00000493608 OR5C1Q8NGR4 320 aa7.57□□□□□ -1.2
COL6A3-214ENST00000493608 PFDN5Q99471 154 aa7.57□□□□□ -1.2
COL6A3-214ENST00000493608 MARVELD1Q9BSK0 173 aa7.57□□□□□ -1.2
COL6A3-214ENST00000493608 NDUFAF3Q9BU61 184 aa7.57□□□□□ -1.2
COL6A3-214ENST00000493608 E5RGE8 158 aa7.56□□□□□ -1.2
COL6A3-214ENST00000493608 SSNA1O43805 119 aa7.56□□□□□ -1.2
COL6A3-214ENST00000493608 PRAF2O60831 178 aa7.56□□□□□ -1.2
COL6A3-214ENST00000493608 PYYP10082 97 aa7.56□□□□□ -1.2
COL6A3-214ENST00000493608 OR10J6PQ8NGY7 276 aa7.56□□□□□ -1.2
COL6A3-214ENST00000493608 NPCDR1Q9BY65 106 aa7.56□□□□□ -1.2
COL6A3-214ENST00000493608 SLC25A31Q9H0C2 315 aa7.56□□□□□ -1.2
COL6A3-214ENST00000493608 AP5S1Q9NUS5 200 aa7.56□□□□□ -1.2
COL6A3-214ENST00000493608 PLAC8L1A1L4L8 177 aa7.55□□□□□ -1.2
COL6A3-214ENST00000493608 M0R3E3 92 aa7.55□□□□□ -1.2
COL6A3-214ENST00000493608 CT45A10P0DMU9 189 aa7.55□□□□□ -1.2
COL6A3-214ENST00000493608 DEFB130BP0DP73 79 aa7.55□□□□□ -1.2
COL6A3-214ENST00000493608 DEFB130AP0DP74 79 aa7.55□□□□□ -1.2
COL6A3-214ENST00000493608 CDKN1BP46527 198 aa7.55□□□□□ -1.2
COL6A3-214ENST00000493608 DEFA1P59665 94 aa7.55□□□□□ -1.2
COL6A3-214ENST00000493608 DEFA3P59666 94 aa7.55□□□□□ -1.2
COL6A3-214ENST00000493608 CYCSP99999 105 aaKnown RBP7.55□□□□□ -1.2
COL6A3-214ENST00000493608 CHAC2Q8WUX2 184 aa7.55□□□□□ -1.2
COL6A3-214ENST00000493608 BLNKQ8WV28 456 aa7.55□□□□□ -1.2
COL6A3-214ENST00000493608 PPP1R1CQ8WVI7 109 aa7.55□□□□□ -1.2
COL6A3-214ENST00000493608 DNAH10Q8IVF4 4471 aa7.55□□□□□ -1.2
COL6A3-214ENST00000493608 DNAH6Q9C0G6 4158 aa7.54□□□□□ -1.2
COL6A3-214ENST00000493608 BIRC6Q9NR09 4857 aa7.54□□□□□ -1.2
COL6A3-214ENST00000493608 TRBV19A0A075B6N1 114 aa7.54□□□□□ -1.2
COL6A3-214ENST00000493608 TEX48A0A1B0GUV7 120 aa7.54□□□□□ -1.2
COL6A3-214ENST00000493608 MPDU1O75352 247 aa7.54□□□□□ -1.2
COL6A3-214ENST00000493608 NDUFB4O95168 129 aa7.54□□□□□ -1.2
COL6A3-214ENST00000493608 TAS2R60P59551 318 aa7.54□□□□□ -1.2
COL6A3-214ENST00000493608 ERCC8Q13216 396 aa7.54□□□□□ -1.2
COL6A3-214ENST00000493608 GUK1Q16774 197 aa7.54□□□□□ -1.2
COL6A3-214ENST00000493608 GFI1BQ5VTD9 330 aa7.54□□□□□ -1.2
COL6A3-214ENST00000493608 TMEM88Q6PEY1 159 aa7.54□□□□□ -1.2
COL6A3-214ENST00000493608 MIR17HGQ75NE6 70 aa7.54□□□□□ -1.2
COL6A3-214ENST00000493608 EXOC3-AS1Q8N2X6 119 aa7.54□□□□□ -1.2
COL6A3-214ENST00000493608 TIMM9Q9Y5J7 89 aa7.54□□□□□ -1.2
COL6A3-214ENST00000493608 LYRM9A8MSI8 78 aa7.53□□□□□ -1.2
COL6A3-214ENST00000493608 M0R2N4 97 aa7.53□□□□□ -1.2
COL6A3-214ENST00000493608 MPC2O95563 127 aa7.53□□□□□ -1.2
COL6A3-214ENST00000493608 P0DMU3 169 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms