RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 PHOX2AO14813 284 aa7.76□□□□□ -1.17
PRPF3-206ENST00000493553 HNF1AP20823 631 aa7.76□□□□□ -1.17
PRPF3-206ENST00000493553 RPL15P61313 204 aaKnown RBP7.76□□□□□ -1.17
PRPF3-206ENST00000493553 OR5I1Q13606 314 aa7.76□□□□□ -1.17
PRPF3-206ENST00000493553 PSG3Q16557 428 aa7.76□□□□□ -1.17
PRPF3-206ENST00000493553 SMUG1Q53HV7 270 aa7.76□□□□□ -1.17
PRPF3-206ENST00000493553 Q5PR19 223 aa7.76□□□□□ -1.17
PRPF3-206ENST00000493553 GOLT1AQ6ZVE7 132 aa7.76□□□□□ -1.17
PRPF3-206ENST00000493553 Q86TA4 180 aa7.76□□□□□ -1.17
PRPF3-206ENST00000493553 TMEM219Q86XT9 240 aa7.76□□□□□ -1.17
PRPF3-206ENST00000493553 CIARTQ8N365 385 aaPredicted RBP7.76□□□□□ -1.17
PRPF3-206ENST00000493553 RPP21Q9H633 154 aaKnown RBP7.76□□□□□ -1.17
PRPF3-206ENST00000493553 GNB4Q9HAV0 340 aa7.76□□□□□ -1.17
PRPF3-206ENST00000493553 ANKRD17O75179 2603 aaKnown RBP7.75□□□□□ -1.17
PRPF3-206ENST00000493553 RBAKDNA6NC62 111 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 ZNF785A8K8V0 405 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 DIRC3C9JPN6 131 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 G3V318 75 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 SLC17A3O00476 420 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 BUB3O43684 328 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 FSHBP01225 129 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 AMY1AP04745 511 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 ARL3P36405 182 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 TPPP2P59282 170 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 RPS20P60866 119 aaKnown RBP7.75□□□□□ -1.17
PRPF3-206ENST00000493553 SLC35B1P78383 322 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 S100A12P80511 92 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 SCGB2A2Q13296 93 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 FAM162BQ5T6X4 162 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 CLEC19AQ6UXS0 136 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 COX8CQ7Z4L0 72 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 Q8N1X5 172 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 GBGT1Q8N5D6 347 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 PRSS22Q9GZN4 317 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 NPFFR1Q9GZQ6 430 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 RNASE7Q9H1E1 156 aaKnown RBP7.75□□□□□ -1.17
PRPF3-206ENST00000493553 PRDM13Q9H4Q3 707 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 RPH3ALQ9UNE2 315 aa7.75□□□□□ -1.17
PRPF3-206ENST00000493553 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.74□□□□□ -1.17
PRPF3-206ENST00000493553 TRAV34A0A0B4J273 112 aa7.74□□□□□ -1.17
PRPF3-206ENST00000493553 IGHV4-31P0DP07 118 aa7.74□□□□□ -1.17
PRPF3-206ENST00000493553 PPIFP30405 207 aaKnown RBP7.74□□□□□ -1.17
PRPF3-206ENST00000493553 IER3P46695 156 aa7.74□□□□□ -1.17
PRPF3-206ENST00000493553 GNG5P63218 68 aa7.74□□□□□ -1.17
PRPF3-206ENST00000493553 LY6EQ16553 131 aa7.74□□□□□ -1.17
PRPF3-206ENST00000493553 RBPMS2Q6ZRY4 209 aaKnown RBP7.74□□□□□ -1.17
PRPF3-206ENST00000493553 TMEM86BQ8N661 226 aa7.74□□□□□ -1.17
PRPF3-206ENST00000493553 TMEM18Q96B42 140 aa7.74□□□□□ -1.17
PRPF3-206ENST00000493553 VPREB3Q9UKI3 123 aa7.74□□□□□ -1.17
PRPF3-206ENST00000493553 PSG8Q9UQ74 426 aa7.74□□□□□ -1.17
PRPF3-206ENST00000493553 LRBAP50851 2863 aa7.73□□□□□ -1.17
PRPF3-206ENST00000493553 ABCA2Q9BZC7 2435 aa7.73□□□□□ -1.17
PRPF3-206ENST00000493553 CSPG4Q6UVK1 2322 aa7.73□□□□□ -1.17
PRPF3-206ENST00000493553 C19orf71A6NCJ1 209 aa7.73□□□□□ -1.17
PRPF3-206ENST00000493553 IGHG4P01861 327 aa7.73□□□□□ -1.17
PRPF3-206ENST00000493553 PF4V1P10720 104 aa7.73□□□□□ -1.17
PRPF3-206ENST00000493553 FAM106AQ4KMX7 169 aa7.73□□□□□ -1.17
PRPF3-206ENST00000493553 PRNTQ86SH4 94 aa7.73□□□□□ -1.17
PRPF3-206ENST00000493553 HIST3H2BBQ8N257 126 aa7.73□□□□□ -1.17
PRPF3-206ENST00000493553 EXOC3-AS1Q8N2X6 119 aa7.73□□□□□ -1.17
PRPF3-206ENST00000493553 BORCS7Q96B45 105 aa7.73□□□□□ -1.17
PRPF3-206ENST00000493553 LINC00479Q96M42 142 aa7.73□□□□□ -1.17
PRPF3-206ENST00000493553 PACRGQ96M98 296 aaPredicted RBP7.73□□□□□ -1.17
PRPF3-206ENST00000493553 MS4A10Q96PG2 267 aa7.73□□□□□ -1.17
PRPF3-206ENST00000493553 C12orf57Q99622 126 aa7.73□□□□□ -1.17
PRPF3-206ENST00000493553 S4R3C0 116 aa7.73□□□□□ -1.17
PRPF3-206ENST00000493553 SNURFLB1AK76 121 aa7.72□□□□□ -1.17
PRPF3-206ENST00000493553 K7EMT4 169 aa7.72□□□□□ -1.17
PRPF3-206ENST00000493553 IGHV3-23P01764 117 aa7.72□□□□□ -1.17
PRPF3-206ENST00000493553 ELANEP08246 267 aa7.72□□□□□ -1.17
PRPF3-206ENST00000493553 CRISP2P16562 243 aa7.72□□□□□ -1.17
PRPF3-206ENST00000493553 FOXA3P55318 350 aaPredicted RBP7.72□□□□□ -1.17
PRPF3-206ENST00000493553 PAFAH1B2P68402 229 aa7.72□□□□□ -1.17
PRPF3-206ENST00000493553 SRSF2Q01130 221 aaKnown RBP7.72□□□□□ -1.17
PRPF3-206ENST00000493553 Q0VG73 95 aa7.72□□□□□ -1.17
PRPF3-206ENST00000493553 FOXE3Q13461 319 aa7.72□□□□□ -1.17
PRPF3-206ENST00000493553 DEFB112Q30KQ8 113 aa7.72□□□□□ -1.17
PRPF3-206ENST00000493553 OR10J3Q5JRS4 329 aa7.72□□□□□ -1.17
PRPF3-206ENST00000493553 PRR27Q6MZM9 219 aa7.72□□□□□ -1.17
PRPF3-206ENST00000493553 Q6YL49 198 aa7.72□□□□□ -1.17
PRPF3-206ENST00000493553 NRGNQ92686 78 aa7.72□□□□□ -1.17
PRPF3-206ENST00000493553 LINC01548A6NM66 108 aa7.71□□□□□ -1.18
PRPF3-206ENST00000493553 IGLV2-11P01706 119 aa7.71□□□□□ -1.18
PRPF3-206ENST00000493553 APCSP02743 223 aa7.71□□□□□ -1.18
PRPF3-206ENST00000493553 RAB4BP61018 213 aa7.71□□□□□ -1.18
PRPF3-206ENST00000493553 HBBP68871 147 aa7.71□□□□□ -1.18
PRPF3-206ENST00000493553 RIGQ13278 110 aa7.71□□□□□ -1.18
PRPF3-206ENST00000493553 NHLRC2Q8NBF2 726 aa7.71□□□□□ -1.18
PRPF3-206ENST00000493553 PPP1R14DQ9NXH3 145 aa7.71□□□□□ -1.18
PRPF3-206ENST00000493553 UFC1Q9Y3C8 167 aa7.71□□□□□ -1.18
PRPF3-206ENST00000493553 LENEPQ9Y5L5 61 aa7.71□□□□□ -1.18
PRPF3-206ENST00000493553 HIGD1CA8MV81 97 aa7.7□□□□□ -1.18
PRPF3-206ENST00000493553 H3BTX0 84 aa7.7□□□□□ -1.18
PRPF3-206ENST00000493553 CHEK1O14757 476 aa7.7□□□□□ -1.18
PRPF3-206ENST00000493553 ESDP10768 282 aa7.7□□□□□ -1.18
PRPF3-206ENST00000493553 PLA2G2AP14555 144 aa7.7□□□□□ -1.18
PRPF3-206ENST00000493553 CBLN1P23435 193 aa7.7□□□□□ -1.18
PRPF3-206ENST00000493553 CFHR3Q02985 330 aa7.7□□□□□ -1.18
PRPF3-206ENST00000493553 GAGE13Q4V321 117 aa7.7□□□□□ -1.18
PRPF3-206ENST00000493553 LCN12Q6JVE5 192 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms