RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 TXNDC17Q9BRA2 123 aa8.58□□□□□ -1.04
LSM2-214ENST00000493387 TCEAL7Q9BRU2 100 aa8.58□□□□□ -1.04
LSM2-214ENST00000493387 MANBALQ9NQG1 85 aa8.58□□□□□ -1.04
LSM2-214ENST00000493387 A0A1B0GV50 99 aa8.57□□□□□ -1.04
LSM2-214ENST00000493387 SERTM2A0A1B0GWG4 89 aa8.57□□□□□ -1.04
LSM2-214ENST00000493387 FAM74A7A6NL05 159 aa8.57□□□□□ -1.04
LSM2-214ENST00000493387 SUMO1P63165 101 aaKnown RBP8.57□□□□□ -1.04
LSM2-214ENST00000493387 APRG1Q8IVJ8 170 aa8.57□□□□□ -1.04
LSM2-214ENST00000493387 STHQ8IWL8 128 aa8.57□□□□□ -1.04
LSM2-214ENST00000493387 DEFB125Q8N687 156 aa8.57□□□□□ -1.04
LSM2-214ENST00000493387 C5orf17Q8NAS9 161 aa8.57□□□□□ -1.04
LSM2-214ENST00000493387 OR10J6PQ8NGY7 276 aa8.57□□□□□ -1.04
LSM2-214ENST00000493387 CLUHP3Q96NS8 147 aa8.57□□□□□ -1.04
LSM2-214ENST00000493387 SAV1Q9H4B6 383 aaPredicted RBP8.57□□□□□ -1.04
LSM2-214ENST00000493387 SRD5A3Q9H8P0 318 aa8.57□□□□□ -1.04
LSM2-214ENST00000493387 DNHD1Q96M86 4753 aa8.56□□□□□ -1.04
LSM2-214ENST00000493387 A0A0J9YX75 114 aa8.56□□□□□ -1.04
LSM2-214ENST00000493387 RBAKDNA6NC62 111 aa8.56□□□□□ -1.04
LSM2-214ENST00000493387 F6UZH7 168 aa8.56□□□□□ -1.04
LSM2-214ENST00000493387 PAGE4O60829 102 aa8.56□□□□□ -1.04
LSM2-214ENST00000493387 SLC25A5P05141 298 aaKnown RBP8.56□□□□□ -1.04
LSM2-214ENST00000493387 HLA-DRB4P13762 266 aa8.56□□□□□ -1.04
LSM2-214ENST00000493387 HLA-DMBP28068 263 aa8.56□□□□□ -1.04
LSM2-214ENST00000493387 UBE2G2P60604 165 aa8.56□□□□□ -1.04
LSM2-214ENST00000493387 CCL20P78556 96 aa8.56□□□□□ -1.04
LSM2-214ENST00000493387 ACTL10Q5JWF8 245 aa8.56□□□□□ -1.04
LSM2-214ENST00000493387 CST9LP1Q5W188 147 aa8.56□□□□□ -1.04
LSM2-214ENST00000493387 OR8A1Q8NGG7 326 aa8.56□□□□□ -1.04
LSM2-214ENST00000493387 GNG13Q9P2W3 67 aa8.56□□□□□ -1.04
LSM2-214ENST00000493387 YTHDF2Q9Y5A9 579 aaKnown RBP8.56□□□□□ -1.04
LSM2-214ENST00000493387 HLA-DRB4X5D2U9 266 aa8.56□□□□□ -1.04
LSM2-214ENST00000493387 KNCNA6PVL3 124 aa8.55□□□□□ -1.04
LSM2-214ENST00000493387 ZNF705FA8MVS1 300 aaPredicted RBP8.55□□□□□ -1.04
LSM2-214ENST00000493387 H3BMM0 161 aa8.55□□□□□ -1.04
LSM2-214ENST00000493387 K7EIL1 84 aa8.55□□□□□ -1.04
LSM2-214ENST00000493387 K7EQM0 130 aa8.55□□□□□ -1.04
LSM2-214ENST00000493387 M0R3E3 92 aa8.55□□□□□ -1.04
LSM2-214ENST00000493387 IGHV4-30-4P0DP06 118 aa8.55□□□□□ -1.04
LSM2-214ENST00000493387 NUTF2P61970 127 aaKnown RBP8.55□□□□□ -1.04
LSM2-214ENST00000493387 HIST1H2BAQ96A08 127 aa8.55□□□□□ -1.04
LSM2-214ENST00000493387 WFDC10AQ9H1F0 79 aa8.55□□□□□ -1.04
LSM2-214ENST00000493387 EPDR1Q9UM22 224 aa8.55□□□□□ -1.04
LSM2-214ENST00000493387 LOC102724200A0A096LPH7 203 aaPredicted RBP8.54□□□□□ -1.04
LSM2-214ENST00000493387 KIR2DL5BA0A0G2JN68 375 aa8.54□□□□□ -1.04
LSM2-214ENST00000493387 KIR2DL5BA0A0G2JPC4 375 aa8.54□□□□□ -1.04
LSM2-214ENST00000493387 FBLL1A6NHQ2 334 aaKnown RBP8.54□□□□□ -1.04
LSM2-214ENST00000493387 GGTLC3B5MD39 225 aa8.54□□□□□ -1.04
LSM2-214ENST00000493387 DIRC3C9JPN6 131 aa8.54□□□□□ -1.04
LSM2-214ENST00000493387 PRB2P02812 416 aaPredicted RBP8.54□□□□□ -1.04
LSM2-214ENST00000493387 NMBP08949 121 aa8.54□□□□□ -1.04
LSM2-214ENST00000493387 BCL2P10415 239 aa8.54□□□□□ -1.04
LSM2-214ENST00000493387 IFITM2Q01629 132 aa8.54□□□□□ -1.04
LSM2-214ENST00000493387 HIST1H1AQ02539 215 aaPredicted RBP8.54□□□□□ -1.04
LSM2-214ENST00000493387 MORN3Q6PF18 240 aaPredicted RBP8.54□□□□□ -1.04
LSM2-214ENST00000493387 KIR2DL5AQ8N109 375 aa8.54□□□□□ -1.04
LSM2-214ENST00000493387 KIR2DL5BQ8NHK3 375 aa8.54□□□□□ -1.04
LSM2-214ENST00000493387 LINC00477Q96M19 166 aa8.54□□□□□ -1.04
LSM2-214ENST00000493387 CITED4Q96RK1 184 aa8.54□□□□□ -1.04
LSM2-214ENST00000493387 PPP1R14DQ9NXH3 145 aa8.54□□□□□ -1.04
LSM2-214ENST00000493387 VAX2Q9UIW0 290 aa8.54□□□□□ -1.04
LSM2-214ENST00000493387 A8MTW9 85 aa8.53□□□□□ -1.04
LSM2-214ENST00000493387 C11orf94C9JXX5 98 aa8.53□□□□□ -1.04
LSM2-214ENST00000493387 PRAC2D3DTV9 90 aa8.53□□□□□ -1.04
LSM2-214ENST00000493387 NPIPB6E9PJ23 425 aa8.53□□□□□ -1.04
LSM2-214ENST00000493387 F6UB75 175 aa8.53□□□□□ -1.04
LSM2-214ENST00000493387 TCRAP04437 139 aa8.53□□□□□ -1.04
LSM2-214ENST00000493387 CNN1P51911 297 aaKnown RBP8.53□□□□□ -1.04
LSM2-214ENST00000493387 APOC4P55056 127 aa8.53□□□□□ -1.04
LSM2-214ENST00000493387 ZNF124Q15973 351 aa8.53□□□□□ -1.04
LSM2-214ENST00000493387 DEFB121Q5J5C9 76 aa8.53□□□□□ -1.04
LSM2-214ENST00000493387 CLLU1Q5K131 121 aa8.53□□□□□ -1.04
LSM2-214ENST00000493387 C9orf47Q6ZRZ4 202 aa8.53□□□□□ -1.04
LSM2-214ENST00000493387 TRPT1Q86TN4 253 aaKnown RBP8.53□□□□□ -1.04
LSM2-214ENST00000493387 CCDC28AQ8IWP9 274 aa8.53□□□□□ -1.04
LSM2-214ENST00000493387 OR4B1Q8NGF8 309 aa8.53□□□□□ -1.04
LSM2-214ENST00000493387 MRAPQ8TCY5 172 aa8.53□□□□□ -1.04
LSM2-214ENST00000493387 ATG101Q9BSB4 218 aa8.53□□□□□ -1.04
LSM2-214ENST00000493387 PKD1L1Q8TDX9 2849 aa8.52□□□□□ -1.05
LSM2-214ENST00000493387 RBMY1BA6NDE4 496 aaKnown RBP8.52□□□□□ -1.05
LSM2-214ENST00000493387 RBMY1EA6NEQ0 496 aaKnown RBP8.52□□□□□ -1.05
LSM2-214ENST00000493387 RBFOX3A6NFN3 312 aa8.52□□□□□ -1.05
LSM2-214ENST00000493387 PEX7O00628 323 aa8.52□□□□□ -1.05
LSM2-214ENST00000493387 UBE2CO00762 179 aa8.52□□□□□ -1.05
LSM2-214ENST00000493387 PDE6DO43924 150 aa8.52□□□□□ -1.05
LSM2-214ENST00000493387 NDUFS6O75380 124 aaKnown RBP8.52□□□□□ -1.05
LSM2-214ENST00000493387 AMBPP02760 352 aa8.52□□□□□ -1.05
LSM2-214ENST00000493387 S100A9P06702 114 aaKnown RBP8.52□□□□□ -1.05
LSM2-214ENST00000493387 RBMY1DP0C7P1 496 aaKnown RBP8.52□□□□□ -1.05
LSM2-214ENST00000493387 TSPOP30536 169 aa8.52□□□□□ -1.05
LSM2-214ENST00000493387 DEFA6Q01524 100 aa8.52□□□□□ -1.05
LSM2-214ENST00000493387 MEF2BQ02080 365 aaPredicted RBP8.52□□□□□ -1.05
LSM2-214ENST00000493387 HAGHQ16775 308 aa8.52□□□□□ -1.05
LSM2-214ENST00000493387 TMEM78Q5T7P6 136 aa8.52□□□□□ -1.05
LSM2-214ENST00000493387 GDF5OSQ5U4N7 250 aa8.52□□□□□ -1.05
LSM2-214ENST00000493387 GOLT1AQ6ZVE7 132 aa8.52□□□□□ -1.05
LSM2-214ENST00000493387 CYB561D1Q8N8Q1 229 aa8.52□□□□□ -1.05
LSM2-214ENST00000493387 ODF3Q96PU9 254 aa8.52□□□□□ -1.05
LSM2-214ENST00000493387 RPH3ALQ9UNE2 315 aa8.52□□□□□ -1.05
LSM2-214ENST00000493387 CMYA5Q8N3K9 4069 aa8.51□□□□□ -1.05
LSM2-214ENST00000493387 NOTCH1P46531 2555 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms