RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 BMI1P35226 326 aa6.99□□□□□ -1.29
SMARCC1-208ENST00000492896 TCL1AP56279 114 aa6.99□□□□□ -1.29
SMARCC1-208ENST00000492896 CT83Q5H943 113 aa6.99□□□□□ -1.29
SMARCC1-208ENST00000492896 ACTL10Q5JWF8 245 aa6.99□□□□□ -1.29
SMARCC1-208ENST00000492896 GPHB5Q86YW7 130 aa6.99□□□□□ -1.29
SMARCC1-208ENST00000492896 OR4B1Q8NGF8 309 aa6.99□□□□□ -1.29
SMARCC1-208ENST00000492896 FRZBQ92765 325 aa6.99□□□□□ -1.29
SMARCC1-208ENST00000492896 UBE2E2Q96LR5 201 aa6.99□□□□□ -1.29
SMARCC1-208ENST00000492896 TMEM160Q9NX00 188 aa6.99□□□□□ -1.29
SMARCC1-208ENST00000492896 CLEC5AQ9NY25 188 aa6.99□□□□□ -1.29
SMARCC1-208ENST00000492896 UFC1Q9Y3C8 167 aa6.99□□□□□ -1.29
SMARCC1-208ENST00000492896 AKAP9Q99996 3911 aa6.99□□□□□ -1.29
SMARCC1-208ENST00000492896 ZANQ9Y493 2812 aa6.99□□□□□ -1.29
SMARCC1-208ENST00000492896 TRAV8-2A0A0B4J237 113 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 RBAKDNA6NC62 111 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 IZUMO1RA6ND01 250 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 PHOX2AO14813 284 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 HIST1H2BKO60814 126 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 CA1P00915 261 aaPredicted RBP6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 HIST1H2BJP06899 126 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 TRGC1P0CF51 173 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 CT45A10P0DMU9 189 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 HIST1H2BOP23527 126 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 HIST1H2BBP33778 126 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 HIST1H2BDP58876 126 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 HIST1H2BCP62807 126 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 HIST2H2BEQ16778 126 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 COX19Q49B96 90 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 IGFL4Q6B9Z1 124 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 LCN12Q6JVE5 192 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 LINC00322Q6ZN03 302 aaPredicted RBP6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 REC114Q7Z4M0 266 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 TSKUQ8WUA8 353 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 HIST1H2BHQ93079 126 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 ZC2HC1AQ96GY0 325 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 C16orf92Q96LL3 132 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 HIST1H2BNQ99877 126 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 HIST1H2BMQ99879 126 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 NDFIP1Q9BT67 221 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 TRAPPC1Q9Y5R8 145 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 CCDC168Q8NDH2 2452 aa6.98□□□□□ -1.29
SMARCC1-208ENST00000492896 FLNAP21333 2647 aaKnown RBP6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 IGHV4OR15-8A0A075B7B6 117 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 A0A087WW49 117 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 FAM181BA6NEQ2 426 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 C5orf52A6NGY3 159 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 ZNF705FA8MVS1 300 aaPredicted RBP6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 A8MWL6 223 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 NPIPB6E9PJ23 425 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 UBE2CO00762 179 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 PRB4P10163 310 aaPredicted RBP6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 NDUFA6P56556 154 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 SNRPEP62304 92 aaKnown RBP6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 FABP9Q0Z7S8 132 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 TM4SF20Q53R12 229 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 SAPCD1Q5SSQ6 148 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 WDR73Q6P4I2 378 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 Q6ZSV7 163 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 Q71RC1 249 aaPredicted RBP6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 RNF182Q8N6D2 247 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 KLHDC1Q8N7A1 406 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 C8orf49Q96NF6 230 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 NEU1Q99519 415 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 ASCL2Q99929 193 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 RHPN1-AS1Q9BWJ2 59 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 ESM1Q9NQ30 184 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 NAT8BQ9UHF3 227 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 SMPXQ9UHP9 88 aa6.97□□□□□ -1.29
SMARCC1-208ENST00000492896 ZNF469Q96JG9 3925 aaPredicted RBP6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 TEX15Q9BXT5 2789 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 TMEM213A2RRL7 107 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 A8MWP6 167 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 SNURFLB1AK76 121 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 PRAC2D3DTV9 90 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 SOCS3O14543 225 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 MT-ND6P03923 174 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 RNASE1P07998 156 aaKnown RBP6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 SRD5A1P18405 259 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 CBLN1P23435 193 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 SAMD13Q5VXD3 122 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 MRPL54Q6P161 138 aaKnown RBP6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 COX8CQ7Z4L0 72 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 ZNF738Q8NE65 137 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 OR2D3Q8NGH3 330 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 Q8TAT8 98 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 ZNF418Q8TF45 676 aaPredicted RBP6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 PRR25Q96S07 402 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 VGLL1Q99990 258 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 GFRA4Q9GZZ7 299 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 NRN1Q9NPD7 142 aa6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 MAP1AP78559 2803 aaPredicted RBP6.96□□□□□ -1.3
SMARCC1-208ENST00000492896 HIGD1CA8MV81 97 aa6.95□□□□□ -1.3
SMARCC1-208ENST00000492896 LGALS9O00182 355 aa6.95□□□□□ -1.3
SMARCC1-208ENST00000492896 SPINK4O60575 86 aa6.95□□□□□ -1.3
SMARCC1-208ENST00000492896 HOXD3P31249 432 aaPredicted RBP6.95□□□□□ -1.3
SMARCC1-208ENST00000492896 AKR1D1P51857 326 aa6.95□□□□□ -1.3
SMARCC1-208ENST00000492896 RPL11P62913 178 aaKnown RBP6.95□□□□□ -1.3
SMARCC1-208ENST00000492896 ERCC8Q13216 396 aa6.95□□□□□ -1.3
SMARCC1-208ENST00000492896 SMUG1Q53HV7 270 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms