RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 SCGB3A1Q96QR1 104 aa1.06□□□□□ -2.24
VTA1-204ENST00000491881 OR52E6Q96RD3 313 aa1.06□□□□□ -2.24
VTA1-204ENST00000491881 DERL1Q9BUN8 251 aa1.06□□□□□ -2.24
VTA1-204ENST00000491881 REG4Q9BYZ8 158 aa1.06□□□□□ -2.24
VTA1-204ENST00000491881 COMMD5Q9GZQ3 224 aa1.06□□□□□ -2.24
VTA1-204ENST00000491881 CMTM6Q9NX76 183 aa1.06□□□□□ -2.24
VTA1-204ENST00000491881 OR5AC2Q9NZP5 309 aa1.06□□□□□ -2.24
VTA1-204ENST00000491881 CKLFQ9UBR5 152 aa1.06□□□□□ -2.24
VTA1-204ENST00000491881 GUCA1BQ9UMX6 200 aa1.06□□□□□ -2.24
VTA1-204ENST00000491881 MDN1Q9NU22 5596 aa1.05□□□□□ -2.24
VTA1-204ENST00000491881 VPS13DQ5THJ4 4388 aa1.05□□□□□ -2.24
VTA1-204ENST00000491881 MYOFQ9NZM1 2061 aa1.05□□□□□ -2.24
VTA1-204ENST00000491881 TGIF2-C20orf24A0A0A6YYL0 155 aa1.05□□□□□ -2.24
VTA1-204ENST00000491881 FUOMA2VDF0 154 aa1.05□□□□□ -2.24
VTA1-204ENST00000491881 M0R036 132 aa1.05□□□□□ -2.24
VTA1-204ENST00000491881 PSMD12O00232 456 aaPredicted RBP1.05□□□□□ -2.24
VTA1-204ENST00000491881 HIST1H1EP10412 219 aaKnown RBP1.05□□□□□ -2.24
VTA1-204ENST00000491881 NKX2-5P52952 324 aaPredicted RBP1.05□□□□□ -2.24
VTA1-204ENST00000491881 KISS1Q15726 138 aa1.05□□□□□ -2.24
VTA1-204ENST00000491881 SPANXN3Q5MJ09 141 aa1.05□□□□□ -2.24
VTA1-204ENST00000491881 ALKAL1Q6UXT8 129 aa1.05□□□□□ -2.24
VTA1-204ENST00000491881 BPIFA4PQ86YQ2 179 aa1.05□□□□□ -2.24
VTA1-204ENST00000491881 IMP4Q96G21 291 aaKnown RBP1.05□□□□□ -2.24
VTA1-204ENST00000491881 GINS4Q9BRT9 223 aa1.05□□□□□ -2.24
VTA1-204ENST00000491881 FREM1Q5H8C1 2179 aa1.05□□□□□ -2.24
VTA1-204ENST00000491881 DAPK1P53355 1430 aa1.05□□□□□ -2.24
VTA1-204ENST00000491881 DLG5Q8TDM6 1919 aa1.05□□□□□ -2.24
VTA1-204ENST00000491881 NUP98P52948 1817 aa1.04□□□□□ -2.24
VTA1-204ENST00000491881 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.04□□□□□ -2.24
VTA1-204ENST00000491881 SMIM23A6NLE4 172 aa1.04□□□□□ -2.24
VTA1-204ENST00000491881 OR5F1O95221 314 aa1.04□□□□□ -2.24
VTA1-204ENST00000491881 HLA-DRB1P01911 266 aa1.04□□□□□ -2.24
VTA1-204ENST00000491881 HTR1AP08908 422 aa1.04□□□□□ -2.24
VTA1-204ENST00000491881 CD79AP11912 226 aa1.04□□□□□ -2.24
VTA1-204ENST00000491881 COX6B1P14854 86 aa1.04□□□□□ -2.24
VTA1-204ENST00000491881 PSME3P61289 254 aa1.04□□□□□ -2.24
VTA1-204ENST00000491881 OR2F1Q13607 317 aa1.04□□□□□ -2.24
VTA1-204ENST00000491881 ZNF846Q147U1 533 aa1.04□□□□□ -2.24
VTA1-204ENST00000491881 C10orf55Q5SWW7 151 aa1.04□□□□□ -2.24
VTA1-204ENST00000491881 DPPA3Q6W0C5 159 aa1.04□□□□□ -2.24
VTA1-204ENST00000491881 C1orf158Q8N1D5 194 aa1.04□□□□□ -2.24
VTA1-204ENST00000491881 LRRC25Q8N386 305 aaPredicted RBP1.04□□□□□ -2.24
VTA1-204ENST00000491881 KRTAP2-1Q9BYU5 128 aa1.04□□□□□ -2.24
VTA1-204ENST00000491881 TRABDQ9H4I3 376 aa1.04□□□□□ -2.24
VTA1-204ENST00000491881 PRTFDC1Q9NRG1 225 aa1.04□□□□□ -2.24
VTA1-204ENST00000491881 VPS13BQ7Z7G8 4022 aa1.04□□□□□ -2.24
VTA1-204ENST00000491881 SIPA1L3O60292 1781 aaPredicted RBP1.03□□□□□ -2.24
VTA1-204ENST00000491881 RGPD2P0DJD1 1756 aa1.03□□□□□ -2.24
VTA1-204ENST00000491881 AHSA1O95433 338 aa1.03□□□□□ -2.24
VTA1-204ENST00000491881 SHBGP04278 402 aa1.03□□□□□ -2.24
VTA1-204ENST00000491881 SULT1A1P50225 295 aa1.03□□□□□ -2.24
VTA1-204ENST00000491881 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.03□□□□□ -2.24
VTA1-204ENST00000491881 DEFB128Q7Z7B8 93 aa1.03□□□□□ -2.24
VTA1-204ENST00000491881 TMEM86BQ8N661 226 aa1.03□□□□□ -2.24
VTA1-204ENST00000491881 ANKRD29Q8N6D5 301 aa1.03□□□□□ -2.24
VTA1-204ENST00000491881 OTUD6BQ8N6M0 293 aa1.03□□□□□ -2.24
VTA1-204ENST00000491881 ZNF565Q8N9K5 539 aa1.03□□□□□ -2.24
VTA1-204ENST00000491881 OR13C4Q8NGS5 318 aa1.03□□□□□ -2.24
VTA1-204ENST00000491881 AQP3Q92482 292 aa1.03□□□□□ -2.24
VTA1-204ENST00000491881 FBXL12Q9NXK8 326 aa1.03□□□□□ -2.24
VTA1-204ENST00000491881 MYOM3Q5VTT5 1437 aa1.03□□□□□ -2.24
VTA1-204ENST00000491881 ECM29Q5VYK3 1845 aa1.03□□□□□ -2.25
VTA1-204ENST00000491881 TANC1Q9C0D5 1861 aa1.03□□□□□ -2.25
VTA1-204ENST00000491881 PLXNA4Q9HCM2 1894 aa1.03□□□□□ -2.25
VTA1-204ENST00000491881 DNAH5Q8TE73 4624 aa1.03□□□□□ -2.25
VTA1-204ENST00000491881 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
VTA1-204ENST00000491881 HCRTO43612 131 aa1.02□□□□□ -2.25
VTA1-204ENST00000491881 CLPSP04118 112 aa1.02□□□□□ -2.25
VTA1-204ENST00000491881 SNRPD2P62316 118 aaKnown RBP1.02□□□□□ -2.25
VTA1-204ENST00000491881 UBE2IP63279 158 aaKnown RBP1.02□□□□□ -2.25
VTA1-204ENST00000491881 USF3Q68DE3 2245 aa1.02□□□□□ -2.25
VTA1-204ENST00000491881 LPCAT3Q6P1A2 487 aa1.02□□□□□ -2.25
VTA1-204ENST00000491881 CLVS1Q8IUQ0 354 aaPredicted RBP1.02□□□□□ -2.25
VTA1-204ENST00000491881 OR4E2Q8NGC2 313 aa1.02□□□□□ -2.25
VTA1-204ENST00000491881 OR4D11Q8NGI4 311 aa1.02□□□□□ -2.25
VTA1-204ENST00000491881 DNAJC9Q8WXX5 260 aa1.02□□□□□ -2.25
VTA1-204ENST00000491881 PPP1R2P1Q96PQ5 205 aa1.02□□□□□ -2.25
VTA1-204ENST00000491881 ODF3Q96PU9 254 aa1.02□□□□□ -2.25
VTA1-204ENST00000491881 ULBP3Q9BZM4 244 aa1.02□□□□□ -2.25
VTA1-204ENST00000491881 VPS29Q9UBQ0 182 aa1.02□□□□□ -2.25
VTA1-204ENST00000491881 PKIGQ9Y2B9 76 aa1.02□□□□□ -2.25
VTA1-204ENST00000491881 DNAH2Q9P225 4427 aa1.02□□□□□ -2.25
VTA1-204ENST00000491881 MICAL3Q7RTP6 2002 aa1.01□□□□□ -2.25
VTA1-204ENST00000491881 DOCK5Q9H7D0 1870 aa1.01□□□□□ -2.25
VTA1-204ENST00000491881 A0A0D9SG52 128 aa1.01□□□□□ -2.25
VTA1-204ENST00000491881 IGKV1-5P01602 117 aa1.01□□□□□ -2.25
VTA1-204ENST00000491881 IFNA16P05015 189 aa1.01□□□□□ -2.25
VTA1-204ENST00000491881 HIST1H1TP22492 207 aaPredicted RBP1.01□□□□□ -2.25
VTA1-204ENST00000491881 KCNJ8Q15842 424 aa1.01□□□□□ -2.25
VTA1-204ENST00000491881 ACOT6Q3I5F7 207 aaPredicted RBP1.01□□□□□ -2.25
VTA1-204ENST00000491881 PTRHD1Q6GMV3 140 aaKnown RBP1.01□□□□□ -2.25
VTA1-204ENST00000491881 SPOPLQ6IQ16 392 aa1.01□□□□□ -2.25
VTA1-204ENST00000491881 MIR17HGQ75NE6 70 aa1.01□□□□□ -2.25
VTA1-204ENST00000491881 PFN4Q8NHR9 129 aa1.01□□□□□ -2.25
VTA1-204ENST00000491881 DCUN1D1Q96GG9 259 aa1.01□□□□□ -2.25
VTA1-204ENST00000491881 ARL5BQ96KC2 179 aa1.01□□□□□ -2.25
VTA1-204ENST00000491881 NIPSNAP1Q9BPW8 284 aa1.01□□□□□ -2.25
VTA1-204ENST00000491881 C11orf68Q9H3H3 251 aaKnown RBP1.01□□□□□ -2.25
VTA1-204ENST00000491881 F5P12259 2224 aa1.01□□□□□ -2.25
VTA1-204ENST00000491881 ZFC3H1O60293 1989 aaKnown RBP1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms