RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 C20orf173Q96LM9 149 aa16.26■□□□□ 0.19
VCPKMT-204ENST00000491402 CLEC5AQ9NY25 188 aa16.26■□□□□ 0.19
VCPKMT-204ENST00000491402 RAB19A4D1S5 217 aa16.25■□□□□ 0.19
VCPKMT-204ENST00000491402 G3V4G9 280 aa16.25■□□□□ 0.19
VCPKMT-204ENST00000491402 SNRPD3P62318 126 aaKnown RBP16.25■□□□□ 0.19
VCPKMT-204ENST00000491402 C5orf17Q8NAS9 161 aa16.25■□□□□ 0.19
VCPKMT-204ENST00000491402 LINC00052Q96N35 136 aa16.25■□□□□ 0.19
VCPKMT-204ENST00000491402 SLC25A5P05141 298 aaKnown RBP16.24■□□□□ 0.19
VCPKMT-204ENST00000491402 CMTM2Q8TAZ6 248 aa16.24■□□□□ 0.19
VCPKMT-204ENST00000491402 GPR61Q9BZJ8 451 aa16.24■□□□□ 0.19
VCPKMT-204ENST00000491402 PSG3Q16557 428 aa16.23■□□□□ 0.19
VCPKMT-204ENST00000491402 PRELID1Q9Y255 219 aa16.23■□□□□ 0.19
VCPKMT-204ENST00000491402 ZNF705FA8MVS1 300 aaPredicted RBP16.23■□□□□ 0.19
VCPKMT-204ENST00000491402 PRB4P10163 310 aaPredicted RBP16.23■□□□□ 0.19
VCPKMT-204ENST00000491402 GNG5P63218 68 aa16.23■□□□□ 0.19
VCPKMT-204ENST00000491402 PSMG4Q5JS54 123 aa16.23■□□□□ 0.19
VCPKMT-204ENST00000491402 MRPL53Q96EL3 112 aaKnown RBP16.23■□□□□ 0.19
VCPKMT-204ENST00000491402 PDE6DO43924 150 aa16.22■□□□□ 0.19
VCPKMT-204ENST00000491402 PEA15Q15121 130 aa16.22■□□□□ 0.19
VCPKMT-204ENST00000491402 SAMD5Q5TGI4 173 aa16.22■□□□□ 0.19
VCPKMT-204ENST00000491402 ZNF738Q8NE65 137 aa16.22■□□□□ 0.19
VCPKMT-204ENST00000491402 TCEAL7Q9BRU2 100 aa16.22■□□□□ 0.19
VCPKMT-204ENST00000491402 EPDR1Q9UM22 224 aa16.22■□□□□ 0.19
VCPKMT-204ENST00000491402 RPH3ALQ9UNE2 315 aa16.22■□□□□ 0.19
VCPKMT-204ENST00000491402 CSN1S1P47710 185 aa16.21■□□□□ 0.19
VCPKMT-204ENST00000491402 BEAN1Q3B7T3 259 aa16.21■□□□□ 0.19
VCPKMT-204ENST00000491402 SCO2A0A1W2PP80 73 aa16.21■□□□□ 0.18
VCPKMT-204ENST00000491402 RPUSD4Q96CM3 377 aaKnown RBP16.21■□□□□ 0.18
VCPKMT-204ENST00000491402 SMDT1Q9H4I9 107 aa16.21■□□□□ 0.18
VCPKMT-204ENST00000491402 DIRC3C9JPN6 131 aa16.2■□□□□ 0.18
VCPKMT-204ENST00000491402 C9JQL5 133 aa16.2■□□□□ 0.18
VCPKMT-204ENST00000491402 TCRAP04437 139 aa16.2■□□□□ 0.18
VCPKMT-204ENST00000491402 ARL6IP6Q8N6S5 226 aa16.2■□□□□ 0.18
VCPKMT-204ENST00000491402 HIST1H2BAQ96A08 127 aa16.2■□□□□ 0.18
VCPKMT-204ENST00000491402 ATG101Q9BSB4 218 aa16.2■□□□□ 0.18
VCPKMT-204ENST00000491402 MAP6D1Q9H9H5 199 aa16.2■□□□□ 0.18
VCPKMT-204ENST00000491402 PRAC2D3DTV9 90 aa16.19■□□□□ 0.18
VCPKMT-204ENST00000491402 F6UZH7 168 aa16.19■□□□□ 0.18
VCPKMT-204ENST00000491402 PEX7O00628 323 aa16.19■□□□□ 0.18
VCPKMT-204ENST00000491402 ODF3L2Q3SX64 289 aa16.19■□□□□ 0.18
VCPKMT-204ENST00000491402 EIF4E3Q8N5X7 224 aaKnown RBP16.19■□□□□ 0.18
VCPKMT-204ENST00000491402 DEFB131AP59861 70 aa16.18■□□□□ 0.18
VCPKMT-204ENST00000491402 DEFB1P60022 68 aa16.18■□□□□ 0.18
VCPKMT-204ENST00000491402 UQCC3Q6UW78 93 aa16.18■□□□□ 0.18
VCPKMT-204ENST00000491402 C11orf52Q96A22 123 aa16.18■□□□□ 0.18
VCPKMT-204ENST00000491402 TREM1Q9NP99 234 aa16.18■□□□□ 0.18
VCPKMT-204ENST00000491402 TMEM250H0YL14 139 aa16.18■□□□□ 0.18
VCPKMT-204ENST00000491402 NDUFS6O75380 124 aaKnown RBP16.18■□□□□ 0.18
VCPKMT-204ENST00000491402 SRP19P09132 144 aaKnown RBP16.18■□□□□ 0.18
VCPKMT-204ENST00000491402 CD7P09564 240 aa16.18■□□□□ 0.18
VCPKMT-204ENST00000491402 NDUFA5Q16718 116 aa16.18■□□□□ 0.18
VCPKMT-204ENST00000491402 GOLT1AQ6ZVE7 132 aa16.18■□□□□ 0.18
VCPKMT-204ENST00000491402 CYB561D1Q8N8Q1 229 aa16.18■□□□□ 0.18
VCPKMT-204ENST00000491402 IGKV2-40A0A087WW87 121 aaPredicted RBP16.17■□□□□ 0.18
VCPKMT-204ENST00000491402 IGKV2D-40P01614 121 aaPredicted RBP16.17■□□□□ 0.18
VCPKMT-204ENST00000491402 SLC7A5P1Q8MH63 180 aa16.17■□□□□ 0.18
VCPKMT-204ENST00000491402 C2CD4CQ8TF44 421 aa16.17■□□□□ 0.18
VCPKMT-204ENST00000491402 F6UB75 175 aa16.16■□□□□ 0.18
VCPKMT-204ENST00000491402 FAM110AQ9BQ89 295 aa16.16■□□□□ 0.18
VCPKMT-204ENST00000491402 AGRNO00468 2067 aa16.16■□□□□ 0.18
VCPKMT-204ENST00000491402 LINC00479Q96M42 142 aa16.15■□□□□ 0.18
VCPKMT-204ENST00000491402 SLC35B3Q9H1N7 401 aa16.15■□□□□ 0.18
VCPKMT-204ENST00000491402 SERTM2A0A1B0GWG4 89 aa16.15■□□□□ 0.18
VCPKMT-204ENST00000491402 OR11H12B2RN74 326 aa16.15■□□□□ 0.18
VCPKMT-204ENST00000491402 ZNF705DP0CH99 300 aaPredicted RBP16.15■□□□□ 0.18
VCPKMT-204ENST00000491402 ZNF705BP0CI00 300 aaPredicted RBP16.15■□□□□ 0.18
VCPKMT-204ENST00000491402 CEBPGP53567 150 aa16.15■□□□□ 0.18
VCPKMT-204ENST00000491402 KRTAP10-11P60412 298 aa16.15■□□□□ 0.18
VCPKMT-204ENST00000491402 EGFEM1PQ0D2K5 195 aa16.15■□□□□ 0.18
VCPKMT-204ENST00000491402 GTSCR1Q86UQ5 136 aa16.15■□□□□ 0.18
VCPKMT-204ENST00000491402 APRG1Q8IVJ8 170 aa16.15■□□□□ 0.18
VCPKMT-204ENST00000491402 DERL1Q9BUN8 251 aa16.15■□□□□ 0.18
VCPKMT-204ENST00000491402 TRAV8-1A0A0A6YYK1 113 aa16.14■□□□□ 0.17
VCPKMT-204ENST00000491402 K7EQM0 130 aa16.14■□□□□ 0.17
VCPKMT-204ENST00000491402 AKR1C3P42330 323 aa16.14■□□□□ 0.17
VCPKMT-204ENST00000491402 CMC4P56277 68 aaPredicted RBP16.14■□□□□ 0.17
VCPKMT-204ENST00000491402 ZNF124Q15973 351 aa16.14■□□□□ 0.17
VCPKMT-204ENST00000491402 GDF5OSQ5U4N7 250 aa16.14■□□□□ 0.17
VCPKMT-204ENST00000491402 OR8A1Q8NGG7 326 aa16.14■□□□□ 0.17
VCPKMT-204ENST00000491402 CITED4Q96RK1 184 aa16.14■□□□□ 0.17
VCPKMT-204ENST00000491402 C19orf73Q9NVV2 129 aa16.14■□□□□ 0.17
VCPKMT-204ENST00000491402 RBAKDNA6NC62 111 aa16.13■□□□□ 0.17
VCPKMT-204ENST00000491402 FOXI2Q6ZQN5 318 aa16.13■□□□□ 0.17
VCPKMT-204ENST00000491402 SGK494Q96LW2 274 aa16.13■□□□□ 0.17
VCPKMT-204ENST00000491402 VGLL1Q99990 258 aa16.13■□□□□ 0.17
VCPKMT-204ENST00000491402 SAV1Q9H4B6 383 aaPredicted RBP16.13■□□□□ 0.17
VCPKMT-204ENST00000491402 TRAV34A0A0B4J273 112 aa16.13■□□□□ 0.17
VCPKMT-204ENST00000491402 RPL35P42766 123 aaKnown RBP16.13■□□□□ 0.17
VCPKMT-204ENST00000491402 CNN1P51911 297 aaKnown RBP16.13■□□□□ 0.17
VCPKMT-204ENST00000491402 TMEM75Q8N9X5 138 aa16.13■□□□□ 0.17
VCPKMT-204ENST00000491402 OR10J6PQ8NGY7 276 aa16.13■□□□□ 0.17
VCPKMT-204ENST00000491402 PARLQ9H300 379 aa16.13■□□□□ 0.17
VCPKMT-204ENST00000491402 A0A0J9YX75 114 aa16.12■□□□□ 0.17
VCPKMT-204ENST00000491402 IGLV2-11P01706 119 aa16.12■□□□□ 0.17
VCPKMT-204ENST00000491402 SFTA3P0C7M3 94 aa16.12■□□□□ 0.17
VCPKMT-204ENST00000491402 HIST1H1AQ02539 215 aaPredicted RBP16.12■□□□□ 0.17
VCPKMT-204ENST00000491402 ERCC8Q13216 396 aa16.12■□□□□ 0.17
VCPKMT-204ENST00000491402 EBLN2Q6P2I7 272 aa16.12■□□□□ 0.17
VCPKMT-204ENST00000491402 WFDC10AQ9H1F0 79 aa16.12■□□□□ 0.17
VCPKMT-204ENST00000491402 KLF12Q9Y4X4 402 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms