RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 DEFB130AP0DP74 79 aa12.7□□□□□ -0.38
HMGN1-219ENST00000491183 FGF7P21781 194 aa12.7□□□□□ -0.38
HMGN1-219ENST00000491183 NHLH2Q02577 135 aa12.7□□□□□ -0.38
HMGN1-219ENST00000491183 ENKURQ8TC29 256 aa12.7□□□□□ -0.38
HMGN1-219ENST00000491183 GPN1Q9HCN4 374 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-219ENST00000491183 M0R2N4 97 aa12.69□□□□□ -0.38
HMGN1-219ENST00000491183 HTN1P15515 57 aa12.69□□□□□ -0.38
HMGN1-219ENST00000491183 GUK1Q16774 197 aa12.69□□□□□ -0.38
HMGN1-219ENST00000491183 OR10J6PQ8NGY7 276 aa12.69□□□□□ -0.38
HMGN1-219ENST00000491183 H0YIZ8 118 aa12.68□□□□□ -0.38
HMGN1-219ENST00000491183 CT45A10P0DMU9 189 aa12.68□□□□□ -0.38
HMGN1-219ENST00000491183 GCSAMLQ5JQS6 135 aa12.68□□□□□ -0.38
HMGN1-219ENST00000491183 OR5AC2Q9NZP5 309 aa12.68□□□□□ -0.38
HMGN1-219ENST00000491183 NACAE9PAV3 2078 aa12.67□□□□□ -0.38
HMGN1-219ENST00000491183 TRBV19A0A075B6N1 114 aa12.67□□□□□ -0.38
HMGN1-219ENST00000491183 GFI1BQ5VTD9 330 aa12.67□□□□□ -0.38
HMGN1-219ENST00000491183 UBE2DNLQ8IWF7 75 aa12.67□□□□□ -0.38
HMGN1-219ENST00000491183 RNASE8Q8TDE3 154 aaKnown RBP12.67□□□□□ -0.38
HMGN1-219ENST00000491183 C16orf74Q96GX8 76 aa12.67□□□□□ -0.38
HMGN1-219ENST00000491183 C20orf144Q9BQM9 153 aa12.67□□□□□ -0.38
HMGN1-219ENST00000491183 NPCDR1Q9BY65 106 aa12.67□□□□□ -0.38
HMGN1-219ENST00000491183 NMES1Q9C002 83 aa12.67□□□□□ -0.38
HMGN1-219ENST00000491183 PTTG2Q9NZH5 202 aa12.67□□□□□ -0.38
HMGN1-219ENST00000491183 TMEM14CQ9P0S9 112 aa12.67□□□□□ -0.38
HMGN1-219ENST00000491183 E5RGE8 158 aa12.66□□□□□ -0.38
HMGN1-219ENST00000491183 NPIPB6E9PJ23 425 aa12.66□□□□□ -0.38
HMGN1-219ENST00000491183 INMT-MINDY4F8WBC2 141 aa12.66□□□□□ -0.38
HMGN1-219ENST00000491183 H7BYZ3 331 aa12.66□□□□□ -0.38
HMGN1-219ENST00000491183 ZNF253O75346 499 aa12.66□□□□□ -0.38
HMGN1-219ENST00000491183 MPDU1O75352 247 aa12.66□□□□□ -0.38
HMGN1-219ENST00000491183 NDUFB4O95168 129 aa12.66□□□□□ -0.38
HMGN1-219ENST00000491183 LGALS9BQ3B8N2 356 aa12.66□□□□□ -0.38
HMGN1-219ENST00000491183 RNF212Q495C1 297 aa12.66□□□□□ -0.38
HMGN1-219ENST00000491183 LRRC37A5PQ49AS3 106 aa12.66□□□□□ -0.38
HMGN1-219ENST00000491183 OR5C1Q8NGR4 320 aa12.66□□□□□ -0.38
HMGN1-219ENST00000491183 THAP6Q8TBB0 222 aa12.66□□□□□ -0.38
HMGN1-219ENST00000491183 TIMM8BQ9Y5J9 83 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-219ENST00000491183 IGLV2-18A0A075B6J9 118 aa12.65□□□□□ -0.38
HMGN1-219ENST00000491183 CBY3A6NI87 242 aa12.65□□□□□ -0.38
HMGN1-219ENST00000491183 M0R3E3 92 aa12.65□□□□□ -0.38
HMGN1-219ENST00000491183 RTL8CO15255 209 aa12.65□□□□□ -0.38
HMGN1-219ENST00000491183 PRAF2O60831 178 aa12.65□□□□□ -0.38
HMGN1-219ENST00000491183 RLN2P04090 185 aa12.65□□□□□ -0.38
HMGN1-219ENST00000491183 PYYP10082 97 aa12.65□□□□□ -0.38
HMGN1-219ENST00000491183 HIST1H1EP10412 219 aaKnown RBP12.65□□□□□ -0.38
HMGN1-219ENST00000491183 ZNF493Q6ZR52 646 aa12.65□□□□□ -0.38
HMGN1-219ENST00000491183 LINC00336Q6ZUF6 198 aa12.65□□□□□ -0.38
HMGN1-219ENST00000491183 TMEM263Q8WUH6 116 aaKnown RBP12.65□□□□□ -0.38
HMGN1-219ENST00000491183 ODF3Q96PU9 254 aa12.65□□□□□ -0.38
HMGN1-219ENST00000491183 MARVELD1Q9BSK0 173 aa12.65□□□□□ -0.38
HMGN1-219ENST00000491183 SLC25A31Q9H0C2 315 aa12.65□□□□□ -0.38
HMGN1-219ENST00000491183 NOP10Q9NPE3 64 aaKnown RBP12.65□□□□□ -0.38
HMGN1-219ENST00000491183 F5H768 121 aa12.64□□□□□ -0.39
HMGN1-219ENST00000491183 J3KRW8 73 aa12.64□□□□□ -0.39
HMGN1-219ENST00000491183 H2BFSP57053 126 aa12.64□□□□□ -0.39
HMGN1-219ENST00000491183 Q6ZR54 194 aa12.64□□□□□ -0.39
HMGN1-219ENST00000491183 C15orf53Q8NAA6 179 aa12.64□□□□□ -0.39
HMGN1-219ENST00000491183 MRPL53Q96EL3 112 aaKnown RBP12.64□□□□□ -0.39
HMGN1-219ENST00000491183 FAM167A-AS1Q96KT0 104 aa12.64□□□□□ -0.39
HMGN1-219ENST00000491183 A0A1B0GVY2 172 aa12.63□□□□□ -0.39
HMGN1-219ENST00000491183 ATP5G1P05496 136 aa12.63□□□□□ -0.39
HMGN1-219ENST00000491183 ATP5G3P48201 142 aa12.63□□□□□ -0.39
HMGN1-219ENST00000491183 CYCSP99999 105 aaKnown RBP12.63□□□□□ -0.39
HMGN1-219ENST00000491183 ERCC8Q13216 396 aa12.63□□□□□ -0.39
HMGN1-219ENST00000491183 CLINT1Q14677 625 aa12.63□□□□□ -0.39
HMGN1-219ENST00000491183 SLC25A2Q9BXI2 301 aa12.63□□□□□ -0.39
HMGN1-219ENST00000491183 DNAH2Q9P225 4427 aa12.63□□□□□ -0.39
HMGN1-219ENST00000491183 HECTD4Q9Y4D8 3996 aa12.62□□□□□ -0.39
HMGN1-219ENST00000491183 TRAV12-3A0A0B4J271 114 aa12.62□□□□□ -0.39
HMGN1-219ENST00000491183 LEPP41159 167 aa12.62□□□□□ -0.39
HMGN1-219ENST00000491183 MIR17HGQ75NE6 70 aa12.62□□□□□ -0.39
HMGN1-219ENST00000491183 EXOC3-AS1Q8N2X6 119 aa12.62□□□□□ -0.39
HMGN1-219ENST00000491183 LINC00612Q8N6U2 182 aa12.62□□□□□ -0.39
HMGN1-219ENST00000491183 BLNKQ8WV28 456 aa12.62□□□□□ -0.39
HMGN1-219ENST00000491183 WDR61Q9GZS3 305 aaKnown RBP12.62□□□□□ -0.39
HMGN1-219ENST00000491183 PRELID1Q9Y255 219 aa12.62□□□□□ -0.39
HMGN1-219ENST00000491183 TIMM9Q9Y5J7 89 aa12.62□□□□□ -0.39
HMGN1-219ENST00000491183 FAT2Q9NYQ8 4349 aa12.61□□□□□ -0.39
HMGN1-219ENST00000491183 DNAH17Q9UFH2 4485 aa12.61□□□□□ -0.39
HMGN1-219ENST00000491183 PDE6HQ13956 83 aa12.61□□□□□ -0.39
HMGN1-219ENST00000491183 CCDC28AQ8IWP9 274 aa12.61□□□□□ -0.39
HMGN1-219ENST00000491183 PPP1R1CQ8WVI7 109 aa12.61□□□□□ -0.39
HMGN1-219ENST00000491183 FAM19A4Q96LR4 140 aa12.61□□□□□ -0.39
HMGN1-219ENST00000491183 AGPAT4-IT1Q9H0P7 198 aa12.61□□□□□ -0.39
HMGN1-219ENST00000491183 PRSS29PA6NIE9 313 aa12.6□□□□□ -0.39
HMGN1-219ENST00000491183 LINC00477Q96M19 166 aa12.6□□□□□ -0.39
HMGN1-219ENST00000491183 NUDT3O95989 172 aa12.59□□□□□ -0.39
HMGN1-219ENST00000491183 NBEAP1P0C6P0 100 aa12.59□□□□□ -0.39
HMGN1-219ENST00000491183 ICAM4Q14773 271 aa12.59□□□□□ -0.39
HMGN1-219ENST00000491183 PYGO2Q9BRQ0 406 aa12.59□□□□□ -0.39
HMGN1-219ENST00000491183 OR51M1Q9H341 326 aa12.59□□□□□ -0.39
HMGN1-219ENST00000491183 C7orf71A4D174 169 aa12.58□□□□□ -0.4
HMGN1-219ENST00000491183 KLLNB2CW77 178 aa12.58□□□□□ -0.4
HMGN1-219ENST00000491183 ZNF324O75467 553 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-219ENST00000491183 MPC2O95563 127 aa12.58□□□□□ -0.4
HMGN1-219ENST00000491183 SLC25A5P05141 298 aaKnown RBP12.58□□□□□ -0.4
HMGN1-219ENST00000491183 FAM3BP58499 235 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-219ENST00000491183 CD300CQ08708 224 aa12.58□□□□□ -0.4
HMGN1-219ENST00000491183 C9orf47Q6ZRZ4 202 aa12.58□□□□□ -0.4
HMGN1-219ENST00000491183 RNF141Q8WVD5 230 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms