RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 BSPH1Q075Z2 132 aa4.58□□□□□ -1.68
VPS41-214ENST00000490924 FAM27E3Q08E93 113 aa4.58□□□□□ -1.68
VPS41-214ENST00000490924 BATFQ16520 125 aa4.58□□□□□ -1.68
VPS41-214ENST00000490924 GAGE13Q4V321 117 aa4.58□□□□□ -1.68
VPS41-214ENST00000490924 FAM104BQ5XKR9 115 aa4.58□□□□□ -1.68
VPS41-214ENST00000490924 PRR27Q6MZM9 219 aa4.58□□□□□ -1.68
VPS41-214ENST00000490924 CCDC144NLQ6NUI1 221 aa4.58□□□□□ -1.68
VPS41-214ENST00000490924 KIR3DL3Q8N743 410 aa4.58□□□□□ -1.68
VPS41-214ENST00000490924 OR4X2Q8NGF9 303 aa4.58□□□□□ -1.68
VPS41-214ENST00000490924 RNF125Q96EQ8 232 aa4.58□□□□□ -1.68
VPS41-214ENST00000490924 AAMDCQ9H7C9 122 aa4.58□□□□□ -1.68
VPS41-214ENST00000490924 THYN1Q9P016 225 aa4.58□□□□□ -1.68
VPS41-214ENST00000490924 MRPL36Q9P0J6 103 aaKnown RBP4.58□□□□□ -1.68
VPS41-214ENST00000490924 CTSZQ9UBR2 303 aa4.58□□□□□ -1.68
VPS41-214ENST00000490924 SMPXQ9UHP9 88 aa4.58□□□□□ -1.68
VPS41-214ENST00000490924 RABAC1Q9UI14 185 aa4.58□□□□□ -1.68
VPS41-214ENST00000490924 PSG8Q9UQ74 426 aa4.58□□□□□ -1.68
VPS41-214ENST00000490924 A6NDN8 102 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 ZNF785A8K8V0 405 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 PRSS47A8MTI9 375 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 K7EIM0 57 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 K7ERU9 68 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 TAX1BP3O14907 124 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 TCF21O43680 179 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 GYPEP15421 78 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 GPR6P46095 362 aaPredicted RBP4.57□□□□□ -1.68
VPS41-214ENST00000490924 HINT1P49773 126 aaPredicted RBP4.57□□□□□ -1.68
VPS41-214ENST00000490924 ARF6P62330 175 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 PAX8Q06710 450 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 EBI3Q14213 229 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 C10orf55Q5SWW7 151 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 LCN12Q6JVE5 192 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 LINC00322Q6ZN03 302 aaPredicted RBP4.57□□□□□ -1.68
VPS41-214ENST00000490924 FA2HQ7L5A8 372 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 TCF24Q7RTU0 167 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 BOD1L2Q8IYS8 172 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 ORMDL3Q8N138 153 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 ZNF491Q8N8L2 437 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 OR4C5Q8NGB2 326 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 BLNKQ8WV28 456 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 RPEQ96AT9 228 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 MRPL53Q96EL3 112 aaKnown RBP4.57□□□□□ -1.68
VPS41-214ENST00000490924 ZNF414Q96IQ9 312 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 PGLYRP4Q96LB8 373 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 HIF1ANQ9NWT6 349 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 HIGD1BQ9P298 99 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 LAMA5O15230 3695 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 CADP27708 2225 aa4.57□□□□□ -1.68
VPS41-214ENST00000490924 DSPP15924 2871 aaKnown RBP4.56□□□□□ -1.68
VPS41-214ENST00000490924 OTOGLQ3ZCN5 2332 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 IGLV11-55A0A075B6I3 123 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 LOC105371242A0A075B767 164 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 A0A087X0K7 114 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 ODF3BA8MYP8 253 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 H3BRM9 83 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 K7EMI3 77 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 NBR2O15453 112 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 HBDP02042 147 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 GPR183P32249 361 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 TFPI2P48307 235 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 MFAP4P55083 255 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 LYZP61626 148 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 SRSF1Q07955 248 aaKnown RBP eCLIP4.56□□□□□ -1.68
VPS41-214ENST00000490924 HSD52Q0P140 79 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 MPV17L2Q567V2 206 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 MINOS1Q5TGZ0 78 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 ZNF562Q6V9R5 426 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 GOLT1AQ6ZVE7 132 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 GTF2H5Q6ZYL4 71 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 TTC9CQ8N5M4 171 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 DEFB124Q8NES8 71 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 CCL17Q92583 94 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 ZC2HC1AQ96GY0 325 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 VKORC1Q9BQB6 163 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 HEATR1Q9H583 2144 aaKnown RBP4.56□□□□□ -1.68
VPS41-214ENST00000490924 DYNLRB1Q9NP97 96 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 NXT2Q9NPJ8 142 aaKnown RBP4.56□□□□□ -1.68
VPS41-214ENST00000490924 DPM3Q9P2X0 92 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 MINOS1-NBL1R4GNA1 71 aa4.56□□□□□ -1.68
VPS41-214ENST00000490924 PRR14LQ5THK1 2151 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 PPIAL4CA0A0B4J2A2 164 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 LINC01549A6NIU2 74 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 ZNF561-AS1K7EIQ3 104 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 ARMS2P0C7Q2 107 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 IGLC6P0CF74 106 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 SMIM17P0DL12 118 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 PPIAL4GP0DN37 164 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 FGF6P10767 208 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 PRTN3P24158 256 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 DIAPH2-AS1Q14236 149 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 C5orf64Q2M2E5 130 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 TMEM97Q5BJF2 176 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 HCP5Q6MZN7 132 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 UNQ5815/PRO19632Q6UWF5 114 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 LYPD2Q6UXB3 125 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 SMIM15Q7Z3B0 74 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 PRNTQ86SH4 94 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 OR5A1Q8NGJ0 315 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 PRSS3P2Q8NHM4 247 aa4.55□□□□□ -1.68
VPS41-214ENST00000490924 RITA1Q96K30 269 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms