RNA–Protein interactions for RNA: ENST00000490866.2

SYNE1-229, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 2

Gene SYNE1, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-229ENST00000490866 WFDC9Q8NEX5 89 aa5.29□□□□□ -1.56
SYNE1-229ENST00000490866 BLNKQ8WV28 456 aa5.29□□□□□ -1.56
SYNE1-229ENST00000490866 DLX4Q92988 240 aaPredicted RBP5.29□□□□□ -1.56
SYNE1-229ENST00000490866 RAX2Q96IS3 184 aa5.29□□□□□ -1.56
SYNE1-229ENST00000490866 LINC00477Q96M19 166 aa5.29□□□□□ -1.56
SYNE1-229ENST00000490866 NDFIP1Q9BT67 221 aa5.29□□□□□ -1.56
SYNE1-229ENST00000490866 Q9H3A6 140 aa5.29□□□□□ -1.56
SYNE1-229ENST00000490866 ZNF331Q9NQX6 463 aaPredicted RBP5.29□□□□□ -1.56
SYNE1-229ENST00000490866 TMEM242Q9NWH2 141 aa5.29□□□□□ -1.56
SYNE1-229ENST00000490866 ZNF586Q9NXT0 402 aa5.29□□□□□ -1.56
SYNE1-229ENST00000490866 RFNGQ9Y644 331 aa5.29□□□□□ -1.56
SYNE1-229ENST00000490866 IGHV3-35A0A0C4DH35 117 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 TMEM213A2RRL7 107 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 ZNF727A8MUV8 499 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 DUSP14O95147 198 aaKnown RBP5.28□□□□□ -1.56
SYNE1-229ENST00000490866 TRBV12-3P01733 135 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 TCRAP04437 139 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 SRP19P09132 144 aaKnown RBP5.28□□□□□ -1.56
SYNE1-229ENST00000490866 SFTA3P0C7M3 94 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 MED14OSP0DP75 135 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 PYYP10082 97 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 CD81P60033 236 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 TMEM183BQ1AE95 376 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 DEFB114Q30KQ6 69 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 C9orf66Q5T8R8 295 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 EBLN2Q6P2I7 272 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 C10orf99Q6UWK7 81 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 TCF24Q7RTU0 167 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 TMEM75Q8N9X5 138 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 OR10J6PQ8NGY7 276 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 ZNF503Q96F45 646 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 CLUHP3Q96NS8 147 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 RARRES2Q99969 163 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 TMPRSS5Q9H3S3 457 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 NAT8Q9UHE5 227 aa5.28□□□□□ -1.56
SYNE1-229ENST00000490866 CARHSP1Q9Y2V2 147 aaKnown RBP5.28□□□□□ -1.56
SYNE1-229ENST00000490866 TEP1Q99973 2627 aaKnown RBP5.28□□□□□ -1.56
SYNE1-229ENST00000490866 ATRQ13535 2644 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 A0A1B0GV50 99 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 CXorf65A6NEN9 183 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 DIRC3C9JPN6 131 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 H3BQ15 152 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 PEX7O00628 323 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 NDUFB4O95168 129 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 MT-ND4LP03901 98 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 CSN3P07498 182 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 AKR1C3P42330 323 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 GNG4P50150 75 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 UBE2G2P60604 165 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 NUTF2P61970 127 aaKnown RBP5.27□□□□□ -1.57
SYNE1-229ENST00000490866 RHEBQ15382 184 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 PSG3Q16557 428 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 NSUN5P1Q3KNT7 163 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 TMEM78Q5T7P6 136 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 LEMD1Q68G75 181 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 SSX7Q7RTT5 188 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 SLC7A5P1Q8MH63 180 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 TVP23CQ96ET8 276 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 SMIM7Q9BQ49 75 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 CTDSP1Q9GZU7 261 aa5.27□□□□□ -1.57
SYNE1-229ENST00000490866 XKRY2A2RUG3 117 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 CT45A10P0DMU9 189 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 TSPOP30536 169 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 SLURP1P55000 103 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 RIPPLY3P57055 190 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 DEFA5Q01523 94 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 ZNF124Q15973 351 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 MORN5Q5VZ52 161 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 C9orf47Q6ZRZ4 202 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 COX8CQ7Z4L0 72 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 C15orf54Q8N8G6 183 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 PCNPQ8WW12 178 aaKnown RBP5.26□□□□□ -1.57
SYNE1-229ENST00000490866 ANAPC16Q96DE5 110 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 DAZAP1Q96EP5 407 aaKnown RBP5.26□□□□□ -1.57
SYNE1-229ENST00000490866 ODF3Q96PU9 254 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 IMMP2LQ96T52 175 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 KRTAP9-9Q9BYP9 154 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 KRTAP9-4Q9BYQ2 154 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 MS4A6AQ9H2W1 248 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 YTHDF2Q9Y5A9 579 aaKnown RBP5.26□□□□□ -1.57
SYNE1-229ENST00000490866 SMAD5-AS1Q9Y6J3 95 aa5.26□□□□□ -1.57
SYNE1-229ENST00000490866 A0A087WWC5 75 aa5.25□□□□□ -1.57
SYNE1-229ENST00000490866 A0A1W2PRX2 142 aa5.25□□□□□ -1.57
SYNE1-229ENST00000490866 GGTLC3B5MD39 225 aa5.25□□□□□ -1.57
SYNE1-229ENST00000490866 K7EQG2 157 aa5.25□□□□□ -1.57
SYNE1-229ENST00000490866 ZNF207O43670 478 aaKnown RBP5.25□□□□□ -1.57
SYNE1-229ENST00000490866 SAP30O75446 220 aa5.25□□□□□ -1.57
SYNE1-229ENST00000490866 IGLV1-51P01701 117 aa5.25□□□□□ -1.57
SYNE1-229ENST00000490866 APOC3P02656 99 aa5.25□□□□□ -1.57
SYNE1-229ENST00000490866 APOHP02749 345 aaPredicted RBP5.25□□□□□ -1.57
SYNE1-229ENST00000490866 AMBPP02760 352 aa5.25□□□□□ -1.57
SYNE1-229ENST00000490866 RPL35P42766 123 aaKnown RBP5.25□□□□□ -1.57
SYNE1-229ENST00000490866 KRTAP24-1Q3LI83 254 aa5.25□□□□□ -1.57
SYNE1-229ENST00000490866 PRR31Q5SQ13 230 aa5.25□□□□□ -1.57
SYNE1-229ENST00000490866 FOXI2Q6ZQN5 318 aa5.25□□□□□ -1.57
SYNE1-229ENST00000490866 BAGE2Q86Y30 109 aa5.25□□□□□ -1.57
SYNE1-229ENST00000490866 TMEM183AQ8IXX5 376 aa5.25□□□□□ -1.57
SYNE1-229ENST00000490866 LINC00482Q8N8I6 264 aa5.25□□□□□ -1.57
SYNE1-229ENST00000490866 C11orf44Q8N8P7 122 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms