RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 RHOBP62745 196 aa10.86□□□□□ -0.67
COL27A1-206ENST00000490831 OXA1LQ15070 435 aa10.86□□□□□ -0.67
COL27A1-206ENST00000490831 MRPL53Q96EL3 112 aaKnown RBP10.86□□□□□ -0.67
COL27A1-206ENST00000490831 FAM167A-AS1Q96KT0 104 aa10.86□□□□□ -0.67
COL27A1-206ENST00000490831 MBD2Q9UBB5 411 aa10.86□□□□□ -0.67
COL27A1-206ENST00000490831 EPPK1P58107 5090 aaKnown RBP10.86□□□□□ -0.67
COL27A1-206ENST00000490831 TRAV12-2A0A075B6T6 113 aa10.85□□□□□ -0.67
COL27A1-206ENST00000490831 DEFB131BA0A096LNP1 70 aa10.85□□□□□ -0.67
COL27A1-206ENST00000490831 PRAC2D3DTV9 90 aa10.85□□□□□ -0.67
COL27A1-206ENST00000490831 NDUFB4O95168 129 aa10.85□□□□□ -0.67
COL27A1-206ENST00000490831 CDKN1BP46527 198 aa10.85□□□□□ -0.67
COL27A1-206ENST00000490831 EMP1P54849 157 aa10.85□□□□□ -0.67
COL27A1-206ENST00000490831 FAM222AQ5U5X8 452 aa10.85□□□□□ -0.67
COL27A1-206ENST00000490831 ZNF767PQ75MW2 155 aa10.85□□□□□ -0.67
COL27A1-206ENST00000490831 TMEM256Q8N2U0 113 aa10.85□□□□□ -0.67
COL27A1-206ENST00000490831 OR10J6PQ8NGY7 276 aa10.85□□□□□ -0.67
COL27A1-206ENST00000490831 TMEM208Q9BTX3 173 aa10.85□□□□□ -0.67
COL27A1-206ENST00000490831 SLC25A2Q9BXI2 301 aa10.85□□□□□ -0.67
COL27A1-206ENST00000490831 PARD6GQ9BYG4 376 aaPredicted RBP10.85□□□□□ -0.67
COL27A1-206ENST00000490831 YTHDF2Q9Y5A9 579 aaKnown RBP10.85□□□□□ -0.67
COL27A1-206ENST00000490831 IGHV4-4A0A075B6R2 117 aa10.84□□□□□ -0.67
COL27A1-206ENST00000490831 NPIPB6E9PJ23 425 aa10.84□□□□□ -0.67
COL27A1-206ENST00000490831 C17orf112F2Z3M2 114 aa10.84□□□□□ -0.67
COL27A1-206ENST00000490831 ODF3Q96PU9 254 aa10.84□□□□□ -0.67
COL27A1-206ENST00000490831 MRPL32Q9BYC8 188 aaKnown RBP10.84□□□□□ -0.67
COL27A1-206ENST00000490831 PPP1R14DQ9NXH3 145 aa10.84□□□□□ -0.67
COL27A1-206ENST00000490831 PRELID1Q9Y255 219 aa10.84□□□□□ -0.67
COL27A1-206ENST00000490831 ZNF705GA8MUZ8 300 aaPredicted RBP10.83□□□□□ -0.68
COL27A1-206ENST00000490831 PYYP10082 97 aa10.83□□□□□ -0.68
COL27A1-206ENST00000490831 PRB4P10163 310 aaPredicted RBP10.83□□□□□ -0.68
COL27A1-206ENST00000490831 TAS2R60P59551 318 aa10.83□□□□□ -0.68
COL27A1-206ENST00000490831 MIR17HGQ75NE6 70 aa10.83□□□□□ -0.68
COL27A1-206ENST00000490831 RPP25LQ8N5L8 163 aaKnown RBP10.83□□□□□ -0.68
COL27A1-206ENST00000490831 C20orf144Q9BQM9 153 aa10.83□□□□□ -0.68
COL27A1-206ENST00000490831 NIPSNAP3BQ9BS92 247 aa10.83□□□□□ -0.68
COL27A1-206ENST00000490831 DNAH6Q9C0G6 4158 aa10.83□□□□□ -0.68
COL27A1-206ENST00000490831 PLAC8L1A1L4L8 177 aa10.82□□□□□ -0.68
COL27A1-206ENST00000490831 FUT9Q9Y231 359 aa10.82□□□□□ -0.68
COL27A1-206ENST00000490831 LYRM9A8MSI8 78 aa10.81□□□□□ -0.68
COL27A1-206ENST00000490831 M0R3E3 92 aa10.81□□□□□ -0.68
COL27A1-206ENST00000490831 IFNA5P01569 189 aa10.81□□□□□ -0.68
COL27A1-206ENST00000490831 PRM2P04554 102 aa10.81□□□□□ -0.68
COL27A1-206ENST00000490831 CT45A10P0DMU9 189 aa10.81□□□□□ -0.68
COL27A1-206ENST00000490831 AZU1P20160 251 aa10.81□□□□□ -0.68
COL27A1-206ENST00000490831 FCN2Q15485 313 aa10.81□□□□□ -0.68
COL27A1-206ENST00000490831 FAM210BQ96KR6 192 aa10.81□□□□□ -0.68
COL27A1-206ENST00000490831 LINC01587Q99440 93 aa10.81□□□□□ -0.68
COL27A1-206ENST00000490831 MED28Q9H204 178 aa10.81□□□□□ -0.68
COL27A1-206ENST00000490831 OR51M1Q9H341 326 aa10.81□□□□□ -0.68
COL27A1-206ENST00000490831 WFDC1Q9HC57 220 aa10.81□□□□□ -0.68
COL27A1-206ENST00000490831 TIMM9Q9Y5J7 89 aa10.81□□□□□ -0.68
COL27A1-206ENST00000490831 BIRC6Q9NR09 4857 aa10.8□□□□□ -0.68
COL27A1-206ENST00000490831 H7BYZ3 331 aa10.8□□□□□ -0.68
COL27A1-206ENST00000490831 NBEAP1P0C6P0 100 aa10.8□□□□□ -0.68
COL27A1-206ENST00000490831 KIR3DS1Q14943 382 aa10.8□□□□□ -0.68
COL27A1-206ENST00000490831 FFAR4Q5NUL3 377 aa10.8□□□□□ -0.68
COL27A1-206ENST00000490831 SCGB1C1Q8TD33 95 aa10.8□□□□□ -0.68
COL27A1-206ENST00000490831 BLNKQ8WV28 456 aa10.8□□□□□ -0.68
COL27A1-206ENST00000490831 ASB13Q8WXK3 278 aa10.8□□□□□ -0.68
COL27A1-206ENST00000490831 FXYD5Q96DB9 178 aa10.8□□□□□ -0.68
COL27A1-206ENST00000490831 FAM19A4Q96LR4 140 aa10.8□□□□□ -0.68
COL27A1-206ENST00000490831 PAXXQ9BUH6 204 aa10.8□□□□□ -0.68
COL27A1-206ENST00000490831 SMIM3Q9BZL3 60 aa10.8□□□□□ -0.68
COL27A1-206ENST00000490831 PLA2G2EQ9NZK7 142 aa10.8□□□□□ -0.68
COL27A1-206ENST00000490831 LEPP41159 167 aa10.79□□□□□ -0.68
COL27A1-206ENST00000490831 GFI1BQ5VTD9 330 aa10.79□□□□□ -0.68
COL27A1-206ENST00000490831 ZNF493Q6ZR52 646 aa10.79□□□□□ -0.68
COL27A1-206ENST00000490831 EXOC3-AS1Q8N2X6 119 aa10.79□□□□□ -0.68
COL27A1-206ENST00000490831 RNF141Q8WVD5 230 aa10.79□□□□□ -0.68
COL27A1-206ENST00000490831 ZNF503Q96F45 646 aa10.79□□□□□ -0.68
COL27A1-206ENST00000490831 C16orf74Q96GX8 76 aa10.79□□□□□ -0.68
COL27A1-206ENST00000490831 LINC00477Q96M19 166 aa10.79□□□□□ -0.68
COL27A1-206ENST00000490831 AQP10Q96PS8 301 aa10.79□□□□□ -0.68
COL27A1-206ENST00000490831 NDUFAF3Q9BU61 184 aa10.79□□□□□ -0.68
COL27A1-206ENST00000490831 AAMDCQ9H7C9 122 aa10.79□□□□□ -0.68
COL27A1-206ENST00000490831 GIPP09681 153 aaPredicted RBP10.78□□□□□ -0.68
COL27A1-206ENST00000490831 DAD1P61803 113 aa10.78□□□□□ -0.68
COL27A1-206ENST00000490831 C9orf47Q6ZRZ4 202 aa10.78□□□□□ -0.68
COL27A1-206ENST00000490831 RNASE8Q8TDE3 154 aaKnown RBP10.78□□□□□ -0.68
COL27A1-206ENST00000490831 TMEM263Q8WUH6 116 aaKnown RBP10.78□□□□□ -0.68
COL27A1-206ENST00000490831 KLLNB2CW77 178 aa10.77□□□□□ -0.69
COL27A1-206ENST00000490831 OR10J4P0C629 311 aa10.77□□□□□ -0.69
COL27A1-206ENST00000490831 ICAM4Q14773 271 aa10.77□□□□□ -0.69
COL27A1-206ENST00000490831 LYPD1Q8N2G4 141 aa10.77□□□□□ -0.69
COL27A1-206ENST00000490831 AGPAT4-IT1Q9H0P7 198 aa10.77□□□□□ -0.69
COL27A1-206ENST00000490831 OR7C2O60412 319 aa10.76□□□□□ -0.69
COL27A1-206ENST00000490831 SLC25A5P05141 298 aaKnown RBP10.76□□□□□ -0.69
COL27A1-206ENST00000490831 NMBP08949 121 aa10.76□□□□□ -0.69
COL27A1-206ENST00000490831 CRISP2P16562 243 aa10.76□□□□□ -0.69
COL27A1-206ENST00000490831 TAS2R45P59539 299 aa10.76□□□□□ -0.69
COL27A1-206ENST00000490831 ERCC8Q13216 396 aa10.76□□□□□ -0.69
COL27A1-206ENST00000490831 KHDC3LQ587J8 217 aa10.76□□□□□ -0.69
COL27A1-206ENST00000490831 PHYHIPLQ96FC7 376 aa10.76□□□□□ -0.69
COL27A1-206ENST00000490831 TIMM8BQ9Y5J9 83 aaPredicted RBP10.76□□□□□ -0.69
COL27A1-206ENST00000490831 DNAH10Q8IVF4 4471 aa10.75□□□□□ -0.69
COL27A1-206ENST00000490831 P0DMU3 169 aa10.75□□□□□ -0.69
COL27A1-206ENST00000490831 FAM231AP0DMU4 169 aa10.75□□□□□ -0.69
COL27A1-206ENST00000490831 FAM231CP0DMU5 169 aa10.75□□□□□ -0.69
COL27A1-206ENST00000490831 M6PRP20645 277 aa10.75□□□□□ -0.69
COL27A1-206ENST00000490831 ZNF266Q14584 549 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms