RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 NDUFB4O95168 129 aa14.69□□□□□ -0.06
SHROOM3-209ENST00000490690 RANP62826 216 aaKnown RBP14.69□□□□□ -0.06
SHROOM3-209ENST00000490690 BLOC1S1P78537 153 aa14.69□□□□□ -0.06
SHROOM3-209ENST00000490690 RNF182Q8N6D2 247 aa14.69□□□□□ -0.06
SHROOM3-209ENST00000490690 B9D2Q9BPU9 175 aa14.69□□□□□ -0.06
SHROOM3-209ENST00000490690 Q9H3A6 140 aa14.69□□□□□ -0.06
SHROOM3-209ENST00000490690 TRAV1-1A0A0B4J248 108 aa14.68□□□□□ -0.06
SHROOM3-209ENST00000490690 A0A0J9YX75 114 aa14.68□□□□□ -0.06
SHROOM3-209ENST00000490690 SERTM2A0A1B0GWG4 89 aa14.68□□□□□ -0.06
SHROOM3-209ENST00000490690 SNRPCP09234 159 aaKnown RBP14.68□□□□□ -0.06
SHROOM3-209ENST00000490690 ICAM4Q14773 271 aa14.68□□□□□ -0.06
SHROOM3-209ENST00000490690 TRPT1Q86TN4 253 aaKnown RBP14.68□□□□□ -0.06
SHROOM3-209ENST00000490690 TCEAL7Q9BRU2 100 aa14.68□□□□□ -0.06
SHROOM3-209ENST00000490690 C1QTNF4Q9BXJ3 329 aa14.68□□□□□ -0.06
SHROOM3-209ENST00000490690 H3BMM0 161 aa14.67□□□□□ -0.06
SHROOM3-209ENST00000490690 FHITP49789 147 aa14.67□□□□□ -0.06
SHROOM3-209ENST00000490690 LINC00322Q6ZN03 302 aaPredicted RBP14.67□□□□□ -0.06
SHROOM3-209ENST00000490690 OR8A1Q8NGG7 326 aa14.67□□□□□ -0.06
SHROOM3-209ENST00000490690 C20orf173Q96LM9 149 aa14.67□□□□□ -0.06
SHROOM3-209ENST00000490690 CITED4Q96RK1 184 aa14.67□□□□□ -0.06
SHROOM3-209ENST00000490690 KNCNA6PVL3 124 aa14.66□□□□□ -0.06
SHROOM3-209ENST00000490690 ZNF705EA8MWA4 302 aaPredicted RBP14.66□□□□□ -0.06
SHROOM3-209ENST00000490690 K7EQM0 130 aa14.66□□□□□ -0.06
SHROOM3-209ENST00000490690 IFNA7P01567 189 aa14.66□□□□□ -0.06
SHROOM3-209ENST00000490690 AMBPP02760 352 aa14.66□□□□□ -0.06
SHROOM3-209ENST00000490690 NHLRC4P0CG21 123 aaPredicted RBP14.66□□□□□ -0.06
SHROOM3-209ENST00000490690 IGFL4Q6B9Z1 124 aa14.66□□□□□ -0.06
SHROOM3-209ENST00000490690 ALKAL2Q6UX46 152 aa14.66□□□□□ -0.06
SHROOM3-209ENST00000490690 SSX7Q7RTT5 188 aa14.66□□□□□ -0.06
SHROOM3-209ENST00000490690 CSTL1Q9H114 145 aa14.66□□□□□ -0.06
SHROOM3-209ENST00000490690 PPP1R14DQ9NXH3 145 aa14.66□□□□□ -0.06
SHROOM3-209ENST00000490690 BOLA1Q9Y3E2 137 aa14.66□□□□□ -0.06
SHROOM3-209ENST00000490690 RBAKDNA6NC62 111 aa14.65□□□□□ -0.06
SHROOM3-209ENST00000490690 SLC25A5P05141 298 aaKnown RBP14.65□□□□□ -0.06
SHROOM3-209ENST00000490690 TAGLN2P37802 199 aaKnown RBP14.65□□□□□ -0.06
SHROOM3-209ENST00000490690 FGF8P55075 233 aaPredicted RBP14.65□□□□□ -0.06
SHROOM3-209ENST00000490690 HIST1H1AQ02539 215 aaPredicted RBP14.65□□□□□ -0.06
SHROOM3-209ENST00000490690 EXOC3-AS1Q8N2X6 119 aa14.65□□□□□ -0.06
SHROOM3-209ENST00000490690 C5orf17Q8NAS9 161 aa14.65□□□□□ -0.06
SHROOM3-209ENST00000490690 OR4B1Q8NGF8 309 aa14.65□□□□□ -0.06
SHROOM3-209ENST00000490690 PLA2G2EQ9NZK7 142 aa14.65□□□□□ -0.06
SHROOM3-209ENST00000490690 RBMY1BA6NDE4 496 aaKnown RBP14.64□□□□□ -0.07
SHROOM3-209ENST00000490690 PGPA6NDG6 321 aa14.64□□□□□ -0.07
SHROOM3-209ENST00000490690 RBMY1EA6NEQ0 496 aaKnown RBP14.64□□□□□ -0.07
SHROOM3-209ENST00000490690 FBLL1A6NHQ2 334 aaKnown RBP14.64□□□□□ -0.07
SHROOM3-209ENST00000490690 EIF3GO75821 320 aaKnown RBP eCLIP14.64□□□□□ -0.07
SHROOM3-209ENST00000490690 IFNA1P01562 189 aa14.64□□□□□ -0.07
SHROOM3-209ENST00000490690 RBMY1DP0C7P1 496 aaKnown RBP14.64□□□□□ -0.07
SHROOM3-209ENST00000490690 RPL35AP18077 110 aaKnown RBP14.64□□□□□ -0.07
SHROOM3-209ENST00000490690 ZNF124Q15973 351 aa14.64□□□□□ -0.07
SHROOM3-209ENST00000490690 LINC00477Q96M19 166 aa14.64□□□□□ -0.07
SHROOM3-209ENST00000490690 TXNDC17Q9BRA2 123 aa14.64□□□□□ -0.07
SHROOM3-209ENST00000490690 ZMAT4Q9H898 229 aa14.64□□□□□ -0.07
SHROOM3-209ENST00000490690 MANBALQ9NQG1 85 aa14.64□□□□□ -0.07
SHROOM3-209ENST00000490690 A8MTW9 85 aa14.63□□□□□ -0.07
SHROOM3-209ENST00000490690 TSPOP30536 169 aa14.63□□□□□ -0.07
SHROOM3-209ENST00000490690 CNN1P51911 297 aaKnown RBP14.63□□□□□ -0.07
SHROOM3-209ENST00000490690 Q6ZWC4 215 aa14.63□□□□□ -0.07
SHROOM3-209ENST00000490690 ODF3Q96PU9 254 aa14.63□□□□□ -0.07
SHROOM3-209ENST00000490690 SPATA25Q9BR10 227 aa14.63□□□□□ -0.07
SHROOM3-209ENST00000490690 F6UZH7 168 aa14.62□□□□□ -0.07
SHROOM3-209ENST00000490690 M0R3E3 92 aa14.62□□□□□ -0.07
SHROOM3-209ENST00000490690 HLA-DMBP28068 263 aa14.62□□□□□ -0.07
SHROOM3-209ENST00000490690 PMS2P11Q13670 270 aa14.62□□□□□ -0.07
SHROOM3-209ENST00000490690 HAGHQ16775 308 aa14.62□□□□□ -0.07
SHROOM3-209ENST00000490690 TMEM78Q5T7P6 136 aa14.62□□□□□ -0.07
SHROOM3-209ENST00000490690 TEX261Q6UWH6 196 aa14.62□□□□□ -0.07
SHROOM3-209ENST00000490690 TP53TG1Q9Y2A0 90 aa14.62□□□□□ -0.07
SHROOM3-209ENST00000490690 TRBV7-9A0A0J9YWB2 115 aa14.61□□□□□ -0.07
SHROOM3-209ENST00000490690 ZNF705FA8MVS1 300 aaPredicted RBP14.61□□□□□ -0.07
SHROOM3-209ENST00000490690 CA1P00915 261 aaPredicted RBP14.61□□□□□ -0.07
SHROOM3-209ENST00000490690 HIST1H2BAQ96A08 127 aa14.61□□□□□ -0.07
SHROOM3-209ENST00000490690 FAM74A7A6NL05 159 aa14.6□□□□□ -0.07
SHROOM3-209ENST00000490690 DIRC3C9JPN6 131 aa14.6□□□□□ -0.07
SHROOM3-209ENST00000490690 NPIPB6E9PJ23 425 aa14.6□□□□□ -0.07
SHROOM3-209ENST00000490690 F6UB75 175 aa14.6□□□□□ -0.07
SHROOM3-209ENST00000490690 SUMO1P63165 101 aaKnown RBP14.6□□□□□ -0.07
SHROOM3-209ENST00000490690 GDF5OSQ5U4N7 250 aa14.6□□□□□ -0.07
SHROOM3-209ENST00000490690 C9orf47Q6ZRZ4 202 aa14.6□□□□□ -0.07
SHROOM3-209ENST00000490690 TMPRSS5Q9H3S3 457 aa14.6□□□□□ -0.07
SHROOM3-209ENST00000490690 MEGF8Q7Z7M0 2845 aa14.6□□□□□ -0.07
SHROOM3-209ENST00000490690 LEPP41159 167 aa14.59□□□□□ -0.07
SHROOM3-209ENST00000490690 CST9LP1Q5W188 147 aa14.59□□□□□ -0.07
SHROOM3-209ENST00000490690 ATG101Q9BSB4 218 aa14.59□□□□□ -0.07
SHROOM3-209ENST00000490690 LENEPQ9Y5L5 61 aa14.59□□□□□ -0.07
SHROOM3-209ENST00000490690 NMBP08949 121 aa14.58□□□□□ -0.08
SHROOM3-209ENST00000490690 UBE2G2P60604 165 aa14.58□□□□□ -0.08
SHROOM3-209ENST00000490690 SBSPONQ8IVN8 264 aa14.58□□□□□ -0.08
SHROOM3-209ENST00000490690 ZNF680Q8NEM1 530 aa14.58□□□□□ -0.08
SHROOM3-209ENST00000490690 TM2D3Q9BRN9 247 aa14.58□□□□□ -0.08
SHROOM3-209ENST00000490690 EPDR1Q9UM22 224 aa14.58□□□□□ -0.08
SHROOM3-209ENST00000490690 GGTLC3B5MD39 225 aa14.57□□□□□ -0.08
SHROOM3-209ENST00000490690 IGKV3-20P01619 116 aa14.57□□□□□ -0.08
SHROOM3-209ENST00000490690 TCRAP04437 139 aa14.57□□□□□ -0.08
SHROOM3-209ENST00000490690 CDKN1BP46527 198 aa14.57□□□□□ -0.08
SHROOM3-209ENST00000490690 CYB561D1Q8N8Q1 229 aa14.57□□□□□ -0.08
SHROOM3-209ENST00000490690 RCHY1Q96PM5 261 aa14.57□□□□□ -0.08
SHROOM3-209ENST00000490690 A0A1B0GV50 99 aa14.56□□□□□ -0.08
SHROOM3-209ENST00000490690 PRAC2D3DTV9 90 aa14.56□□□□□ -0.08
SHROOM3-209ENST00000490690 PAGE4O60829 102 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms