RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 FGF8P55075 233 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF3-212ENST00000490387 PSG9Q00887 426 aa12.57□□□□□ -0.4
RAPGEF3-212ENST00000490387 FOXI2Q6ZQN5 318 aa12.57□□□□□ -0.4
RAPGEF3-212ENST00000490387 LYPD1Q8N2G4 141 aa12.57□□□□□ -0.4
RAPGEF3-212ENST00000490387 TRAV1-1A0A0B4J248 108 aa12.56□□□□□ -0.4
RAPGEF3-212ENST00000490387 KNCNA6PVL3 124 aa12.56□□□□□ -0.4
RAPGEF3-212ENST00000490387 GDF5OSQ5U4N7 250 aa12.56□□□□□ -0.4
RAPGEF3-212ENST00000490387 EXOC3-AS1Q8N2X6 119 aa12.56□□□□□ -0.4
RAPGEF3-212ENST00000490387 MRPL53Q96EL3 112 aaKnown RBP12.56□□□□□ -0.4
RAPGEF3-212ENST00000490387 SPATA25Q9BR10 227 aa12.56□□□□□ -0.4
RAPGEF3-212ENST00000490387 TMPRSS5Q9H3S3 457 aa12.56□□□□□ -0.4
RAPGEF3-212ENST00000490387 SAV1Q9H4B6 383 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF3-212ENST00000490387 TMEM167BQ9NRX6 74 aa12.56□□□□□ -0.4
RAPGEF3-212ENST00000490387 A0A0J9YX75 114 aa12.55□□□□□ -0.4
RAPGEF3-212ENST00000490387 F6UB75 175 aa12.55□□□□□ -0.4
RAPGEF3-212ENST00000490387 M0R3E3 92 aa12.55□□□□□ -0.4
RAPGEF3-212ENST00000490387 H2AFB1P0C5Y9 115 aa12.55□□□□□ -0.4
RAPGEF3-212ENST00000490387 HLA-DRB4P13762 266 aa12.55□□□□□ -0.4
RAPGEF3-212ENST00000490387 RANP62826 216 aaKnown RBP12.55□□□□□ -0.4
RAPGEF3-212ENST00000490387 HAGHQ16775 308 aa12.55□□□□□ -0.4
RAPGEF3-212ENST00000490387 ACTL10Q5JWF8 245 aa12.55□□□□□ -0.4
RAPGEF3-212ENST00000490387 TRPT1Q86TN4 253 aaKnown RBP12.55□□□□□ -0.4
RAPGEF3-212ENST00000490387 ZNF738Q8NE65 137 aa12.55□□□□□ -0.4
RAPGEF3-212ENST00000490387 SFT2D1Q8WV19 159 aa12.55□□□□□ -0.4
RAPGEF3-212ENST00000490387 Q9H3A6 140 aa12.55□□□□□ -0.4
RAPGEF3-212ENST00000490387 HLA-DRB4X5D2U9 266 aa12.55□□□□□ -0.4
RAPGEF3-212ENST00000490387 A8MTW9 85 aa12.54□□□□□ -0.4
RAPGEF3-212ENST00000490387 ZNF705FA8MVS1 300 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF3-212ENST00000490387 H3BMM0 161 aa12.54□□□□□ -0.4
RAPGEF3-212ENST00000490387 ICAM4Q14773 271 aa12.54□□□□□ -0.4
RAPGEF3-212ENST00000490387 CASC10Q5T4H9 136 aa12.54□□□□□ -0.4
RAPGEF3-212ENST00000490387 RPUSD4Q96CM3 377 aaKnown RBP12.54□□□□□ -0.4
RAPGEF3-212ENST00000490387 AAMDCQ9H7C9 122 aa12.54□□□□□ -0.4
RAPGEF3-212ENST00000490387 OTORQ9NRC9 128 aa12.54□□□□□ -0.4
RAPGEF3-212ENST00000490387 PRELID1Q9Y255 219 aa12.54□□□□□ -0.4
RAPGEF3-212ENST00000490387 DNAH7Q8WXX0 4024 aa12.53□□□□□ -0.4
RAPGEF3-212ENST00000490387 PRAC2D3DTV9 90 aa12.53□□□□□ -0.4
RAPGEF3-212ENST00000490387 TEX261Q6UWH6 196 aa12.53□□□□□ -0.4
RAPGEF3-212ENST00000490387 CLUHP3Q96NS8 147 aa12.53□□□□□ -0.4
RAPGEF3-212ENST00000490387 A0A1W2PRE2 83 aa12.52□□□□□ -0.41
RAPGEF3-212ENST00000490387 ZNF705EA8MWA4 302 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF3-212ENST00000490387 PRB4P10163 310 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF3-212ENST00000490387 IQCF2Q8IXL9 164 aa12.52□□□□□ -0.41
RAPGEF3-212ENST00000490387 OR8A1Q8NGG7 326 aa12.52□□□□□ -0.41
RAPGEF3-212ENST00000490387 YTHDF2Q9Y5A9 579 aaKnown RBP12.52□□□□□ -0.41
RAPGEF3-212ENST00000490387 LOC102724200A0A096LPH7 203 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF3-212ENST00000490387 GGTLC3B5MD39 225 aa12.51□□□□□ -0.41
RAPGEF3-212ENST00000490387 EBLN2Q6P2I7 272 aa12.51□□□□□ -0.41
RAPGEF3-212ENST00000490387 STHQ8IWL8 128 aa12.51□□□□□ -0.41
RAPGEF3-212ENST00000490387 ZNF680Q8NEM1 530 aa12.51□□□□□ -0.41
RAPGEF3-212ENST00000490387 ARL2-SNX15V9GYD0 113 aa12.51□□□□□ -0.41
RAPGEF3-212ENST00000490387 KIR2DL5BA0A0G2JN68 375 aa12.5□□□□□ -0.41
RAPGEF3-212ENST00000490387 KIR2DL5BA0A0G2JPC4 375 aa12.5□□□□□ -0.41
RAPGEF3-212ENST00000490387 A0A1B0GV50 99 aa12.5□□□□□ -0.41
RAPGEF3-212ENST00000490387 PGPA6NDG6 321 aa12.5□□□□□ -0.41
RAPGEF3-212ENST00000490387 FAM74A7A6NL05 159 aa12.5□□□□□ -0.41
RAPGEF3-212ENST00000490387 ZNF705DP0CH99 300 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-212ENST00000490387 ZNF705BP0CI00 300 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-212ENST00000490387 RPL35AP18077 110 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-212ENST00000490387 CNN1P51911 297 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-212ENST00000490387 CCL20P78556 96 aa12.5□□□□□ -0.41
RAPGEF3-212ENST00000490387 AMTNQ6UX39 209 aa12.5□□□□□ -0.41
RAPGEF3-212ENST00000490387 KIR2DL5AQ8N109 375 aa12.5□□□□□ -0.41
RAPGEF3-212ENST00000490387 ARL6IP6Q8N6S5 226 aa12.5□□□□□ -0.41
RAPGEF3-212ENST00000490387 KIR2DL5BQ8NHK3 375 aa12.5□□□□□ -0.41
RAPGEF3-212ENST00000490387 LYPD6BQ8NI32 183 aa12.5□□□□□ -0.41
RAPGEF3-212ENST00000490387 EDA2RQ9HAV5 297 aa12.5□□□□□ -0.41
RAPGEF3-212ENST00000490387 NPIPB6E9PJ23 425 aa12.49□□□□□ -0.41
RAPGEF3-212ENST00000490387 DUSP14O95147 198 aaKnown RBP12.49□□□□□ -0.41
RAPGEF3-212ENST00000490387 HBE1P02100 147 aa12.49□□□□□ -0.41
RAPGEF3-212ENST00000490387 GIG44P09565 113 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-212ENST00000490387 RETNQ9HD89 108 aa12.49□□□□□ -0.41
RAPGEF3-212ENST00000490387 UBE2G2P60604 165 aa12.48□□□□□ -0.41
RAPGEF3-212ENST00000490387 BLOC1S1P78537 153 aa12.48□□□□□ -0.41
RAPGEF3-212ENST00000490387 HIST1H1AQ02539 215 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF3-212ENST00000490387 PMS2P11Q13670 270 aa12.48□□□□□ -0.41
RAPGEF3-212ENST00000490387 ZFAND6Q6FIF0 208 aa12.48□□□□□ -0.41
RAPGEF3-212ENST00000490387 CCDC28AQ8IWP9 274 aa12.48□□□□□ -0.41
RAPGEF3-212ENST00000490387 C5orf17Q8NAS9 161 aa12.48□□□□□ -0.41
RAPGEF3-212ENST00000490387 RXFP4Q8TDU9 374 aa12.48□□□□□ -0.41
RAPGEF3-212ENST00000490387 IGKV2-40A0A087WW87 121 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF3-212ENST00000490387 RBAKDNA6NC62 111 aa12.47□□□□□ -0.41
RAPGEF3-212ENST00000490387 DIRC3C9JPN6 131 aa12.47□□□□□ -0.41
RAPGEF3-212ENST00000490387 IFNA7P01567 189 aa12.47□□□□□ -0.41
RAPGEF3-212ENST00000490387 IGKV2D-40P01614 121 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF3-212ENST00000490387 PPT1P50897 306 aa12.47□□□□□ -0.41
RAPGEF3-212ENST00000490387 APOC4P55056 127 aa12.47□□□□□ -0.41
RAPGEF3-212ENST00000490387 SUMO1P63165 101 aaKnown RBP12.47□□□□□ -0.41
RAPGEF3-212ENST00000490387 MORN3Q6PF18 240 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF3-212ENST00000490387 C9orf47Q6ZRZ4 202 aa12.47□□□□□ -0.41
RAPGEF3-212ENST00000490387 OR4B1Q8NGF8 309 aa12.47□□□□□ -0.41
RAPGEF3-212ENST00000490387 OR10J6PQ8NGY7 276 aa12.47□□□□□ -0.41
RAPGEF3-212ENST00000490387 NKX6-2Q9C056 277 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF3-212ENST00000490387 CSTL1Q9H114 145 aa12.47□□□□□ -0.41
RAPGEF3-212ENST00000490387 TEX46H3BTG2 121 aa12.46□□□□□ -0.41
RAPGEF3-212ENST00000490387 PAGE4O60829 102 aa12.46□□□□□ -0.41
RAPGEF3-212ENST00000490387 IGKV3-20P01619 116 aa12.46□□□□□ -0.41
RAPGEF3-212ENST00000490387 SLC25A5P05141 298 aaKnown RBP12.46□□□□□ -0.41
RAPGEF3-212ENST00000490387 CSN1S1P47710 185 aa12.46□□□□□ -0.41
RAPGEF3-212ENST00000490387 GNG5P63218 68 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms