RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 CROCCP2Q86T23 111 aa0.48□□□□□ -2.33
CD46-216ENST00000490278 N4BP2Q86UW6 1770 aaPredicted RBP0.47□□□□□ -2.33
CD46-216ENST00000490278 TRBV30A0A0K0K1B3 111 aa0.47□□□□□ -2.33
CD46-216ENST00000490278 PIAS1O75925 651 aa0.47□□□□□ -2.33
CD46-216ENST00000490278 TCTAP57738 103 aa0.47□□□□□ -2.33
CD46-216ENST00000490278 FXYD4P59646 89 aa0.47□□□□□ -2.33
CD46-216ENST00000490278 LTC4SQ16873 150 aa0.47□□□□□ -2.33
CD46-216ENST00000490278 LINC00299Q6ZSB3 139 aa0.47□□□□□ -2.33
CD46-216ENST00000490278 ATOH7Q8N100 152 aa0.47□□□□□ -2.33
CD46-216ENST00000490278 NEK7Q8TDX7 302 aa0.47□□□□□ -2.33
CD46-216ENST00000490278 CST11Q9H112 138 aa0.47□□□□□ -2.33
CD46-216ENST00000490278 LAMTOR3Q9UHA4 124 aa0.47□□□□□ -2.33
CD46-216ENST00000490278 UFC1Q9Y3C8 167 aa0.47□□□□□ -2.33
CD46-216ENST00000490278 BCL9O00512 1426 aa0.47□□□□□ -2.33
CD46-216ENST00000490278 NUPR2A6NF83 97 aa0.46□□□□□ -2.34
CD46-216ENST00000490278 ZNF727A8MUV8 499 aa0.46□□□□□ -2.34
CD46-216ENST00000490278 DIAPH2-AS1Q14236 149 aa0.46□□□□□ -2.34
CD46-216ENST00000490278 VMA21Q3ZAQ7 101 aa0.46□□□□□ -2.34
CD46-216ENST00000490278 OCIAD2Q56VL3 154 aa0.46□□□□□ -2.34
CD46-216ENST00000490278 CDC26Q8NHZ8 85 aa0.46□□□□□ -2.34
CD46-216ENST00000490278 PIK3C2AO00443 1686 aa0.46□□□□□ -2.34
CD46-216ENST00000490278 RTL9Q8NET4 1388 aa0.45□□□□□ -2.34
CD46-216ENST00000490278 FANCMQ8IYD8 2048 aa0.45□□□□□ -2.34
CD46-216ENST00000490278 MUC4Q99102 2169 aa0.45□□□□□ -2.34
CD46-216ENST00000490278 H3BQV1 296 aa0.45□□□□□ -2.34
CD46-216ENST00000490278 MT-ND6P03923 174 aa0.45□□□□□ -2.34
CD46-216ENST00000490278 GLRXP35754 106 aa0.45□□□□□ -2.34
CD46-216ENST00000490278 Q6ZQY7 126 aa0.45□□□□□ -2.34
CD46-216ENST00000490278 BOKQ9UMX3 212 aaPredicted RBP0.45□□□□□ -2.34
CD46-216ENST00000490278 MUC5ACP98088 5654 aa0.44□□□□□ -2.34
CD46-216ENST00000490278 ZNF462Q96JM2 2506 aa0.44□□□□□ -2.34
CD46-216ENST00000490278 PRH1P02810 166 aa0.44□□□□□ -2.34
CD46-216ENST00000490278 PRR15Q8IV56 129 aa0.44□□□□□ -2.34
CD46-216ENST00000490278 LINC00269Q8N2A0 174 aa0.44□□□□□ -2.34
CD46-216ENST00000490278 STX19Q8N4C7 294 aa0.44□□□□□ -2.34
CD46-216ENST00000490278 FAM24BQ8N5W8 94 aa0.44□□□□□ -2.34
CD46-216ENST00000490278 BORCS8Q96FH0 119 aa0.44□□□□□ -2.34
CD46-216ENST00000490278 CARD19Q96LW7 228 aa0.44□□□□□ -2.34
CD46-216ENST00000490278 MCEEQ96PE7 176 aa0.44□□□□□ -2.34
CD46-216ENST00000490278 OR4C12Q96R67 309 aa0.44□□□□□ -2.34
CD46-216ENST00000490278 HOPXQ9BPY8 73 aaPredicted RBP0.44□□□□□ -2.34
CD46-216ENST00000490278 LIMD2Q9BT23 127 aa0.44□□□□□ -2.34
CD46-216ENST00000490278 BIN3Q9NQY0 253 aa0.44□□□□□ -2.34
CD46-216ENST00000490278 OTORQ9NRC9 128 aa0.44□□□□□ -2.34
CD46-216ENST00000490278 MED11Q9P086 117 aa0.44□□□□□ -2.34
CD46-216ENST00000490278 TPRKBQ9Y3C4 175 aa0.44□□□□□ -2.34
CD46-216ENST00000490278 ZGRF1Q86YA3 2104 aa0.43□□□□□ -2.34
CD46-216ENST00000490278 A0A0J9YY99 117 aa0.43□□□□□ -2.34
CD46-216ENST00000490278 TMEM238C9JI98 176 aa0.43□□□□□ -2.34
CD46-216ENST00000490278 KPNA4O00629 521 aaPredicted RBP0.43□□□□□ -2.34
CD46-216ENST00000490278 SPINT3P49223 89 aa0.43□□□□□ -2.34
CD46-216ENST00000490278 ZNF137PP52743 207 aa0.43□□□□□ -2.34
CD46-216ENST00000490278 MRPS36P82909 103 aaKnown RBP0.43□□□□□ -2.34
CD46-216ENST00000490278 Q6ZS92 163 aa0.43□□□□□ -2.34
CD46-216ENST00000490278 ZCCHC23Q6ZST2 131 aa0.43□□□□□ -2.34
CD46-216ENST00000490278 DYDC1Q8WWB3 177 aa0.43□□□□□ -2.34
CD46-216ENST00000490278 EFCAB11Q9BUY7 163 aa0.43□□□□□ -2.34
CD46-216ENST00000490278 NUBP2Q9Y5Y2 271 aa0.43□□□□□ -2.34
CD46-216ENST00000490278 MYH2Q9UKX2 1941 aa0.42□□□□□ -2.34
CD46-216ENST00000490278 YTHDC2Q9H6S0 1430 aaKnown RBP0.42□□□□□ -2.34
CD46-216ENST00000490278 KIAA1107Q9UPP5 1409 aa0.42□□□□□ -2.34
CD46-216ENST00000490278 CCL4P13236 92 aa0.42□□□□□ -2.34
CD46-216ENST00000490278 FABP4P15090 132 aa0.42□□□□□ -2.34
CD46-216ENST00000490278 SERPINB1P30740 379 aa0.42□□□□□ -2.34
CD46-216ENST00000490278 RPL37AP61513 92 aaKnown RBP0.42□□□□□ -2.34
CD46-216ENST00000490278 C3orf33Q6P1S2 294 aa0.42□□□□□ -2.34
CD46-216ENST00000490278 Q86TA4 180 aa0.42□□□□□ -2.34
CD46-216ENST00000490278 SMR3AQ99954 134 aa0.42□□□□□ -2.34
CD46-216ENST00000490278 BOLA2Q9H3K6 86 aa0.42□□□□□ -2.34
CD46-216ENST00000490278 GID8Q9NWU2 228 aa0.42□□□□□ -2.34
CD46-216ENST00000490278 IL20Q9NYY1 176 aa0.42□□□□□ -2.34
CD46-216ENST00000490278 NAT8BQ9UHF3 227 aa0.42□□□□□ -2.34
CD46-216ENST00000490278 ADGBQ8N7X0 1667 aa0.42□□□□□ -2.34
CD46-216ENST00000490278 TRDV1A0A1B0GX56 115 aa0.41□□□□□ -2.34
CD46-216ENST00000490278 FABP2P12104 132 aa0.41□□□□□ -2.34
CD46-216ENST00000490278 PDE6GP18545 87 aa0.41□□□□□ -2.34
CD46-216ENST00000490278 FXYD6P3P58550 94 aa0.41□□□□□ -2.34
CD46-216ENST00000490278 C6orf52Q5T4I8 152 aa0.41□□□□□ -2.34
CD46-216ENST00000490278 OR4B1Q8NGF8 309 aa0.41□□□□□ -2.34
CD46-216ENST00000490278 CCL4L1Q8NHW4 92 aa0.41□□□□□ -2.34
CD46-216ENST00000490278 DIRC1Q969H9 104 aa0.41□□□□□ -2.34
CD46-216ENST00000490278 ISOC1Q96CN7 298 aa0.41□□□□□ -2.34
CD46-216ENST00000490278 RMND5BQ96G75 393 aaPredicted RBP0.41□□□□□ -2.34
CD46-216ENST00000490278 CCL19Q99731 98 aa0.41□□□□□ -2.34
CD46-216ENST00000490278 LRTM1Q9HBL6 345 aa0.41□□□□□ -2.34
CD46-216ENST00000490278 TAF9BQ9HBM6 251 aa0.41□□□□□ -2.34
CD46-216ENST00000490278 PLAC8Q9NZF1 115 aa0.41□□□□□ -2.34
CD46-216ENST00000490278 JPT1Q9UK76 154 aa0.41□□□□□ -2.34
CD46-216ENST00000490278 TECPR2O15040 1411 aa0.4□□□□□ -2.34
CD46-216ENST00000490278 TRAPPC8Q9Y2L5 1435 aa0.4□□□□□ -2.34
CD46-216ENST00000490278 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
CD46-216ENST00000490278 E5RI56 91 aa0.4□□□□□ -2.35
CD46-216ENST00000490278 PPP5D1E7EU14 171 aa0.4□□□□□ -2.35
CD46-216ENST00000490278 KDELR1P24390 212 aa0.4□□□□□ -2.35
CD46-216ENST00000490278 CRYBA4P53673 196 aa0.4□□□□□ -2.35
CD46-216ENST00000490278 SPINK7P58062 85 aa0.4□□□□□ -2.35
CD46-216ENST00000490278 NEDD8Q15843 81 aa0.4□□□□□ -2.35
CD46-216ENST00000490278 TRIQKQ629K1 86 aa0.4□□□□□ -2.35
CD46-216ENST00000490278 CASC2Q6XLA1 102 aa0.4□□□□□ -2.35
CD46-216ENST00000490278 GRPEL2Q8TAA5 225 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms