RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 ARL14EPLP0DKL9 152 aa7.99□□□□□ -1.13
VPS13D-210ENST00000489961 SLC51BQ86UW2 128 aa7.99□□□□□ -1.13
VPS13D-210ENST00000489961 LYPD1Q8N2G4 141 aa7.99□□□□□ -1.13
VPS13D-210ENST00000489961 C9orf62Q8N4C0 152 aa7.99□□□□□ -1.13
VPS13D-210ENST00000489961 OR8A1Q8NGG7 326 aa7.99□□□□□ -1.13
VPS13D-210ENST00000489961 MRPL53Q96EL3 112 aaKnown RBP7.99□□□□□ -1.13
VPS13D-210ENST00000489961 PHYHIPLQ96FC7 376 aa7.99□□□□□ -1.13
VPS13D-210ENST00000489961 ZNF705FA8MVS1 300 aaPredicted RBP7.98□□□□□ -1.13
VPS13D-210ENST00000489961 GCHFRP30047 84 aa7.98□□□□□ -1.13
VPS13D-210ENST00000489961 CNN1P51911 297 aaKnown RBP7.98□□□□□ -1.13
VPS13D-210ENST00000489961 RANP62826 216 aaKnown RBP7.98□□□□□ -1.13
VPS13D-210ENST00000489961 HIST1H1AQ02539 215 aaPredicted RBP7.98□□□□□ -1.13
VPS13D-210ENST00000489961 ICAM4Q14773 271 aa7.98□□□□□ -1.13
VPS13D-210ENST00000489961 DEFB135Q30KP9 77 aa7.98□□□□□ -1.13
VPS13D-210ENST00000489961 FAM74A1Q5RGS3 127 aa7.98□□□□□ -1.13
VPS13D-210ENST00000489961 IQCF2Q8IXL9 164 aa7.98□□□□□ -1.13
VPS13D-210ENST00000489961 EXOC3-AS1Q8N2X6 119 aa7.98□□□□□ -1.13
VPS13D-210ENST00000489961 OR10J6PQ8NGY7 276 aa7.98□□□□□ -1.13
VPS13D-210ENST00000489961 TMED6Q8WW62 240 aa7.98□□□□□ -1.13
VPS13D-210ENST00000489961 RCHY1Q96PM5 261 aa7.98□□□□□ -1.13
VPS13D-210ENST00000489961 C1QTNF4Q9BXJ3 329 aa7.98□□□□□ -1.13
VPS13D-210ENST00000489961 Q9H3A6 140 aa7.98□□□□□ -1.13
VPS13D-210ENST00000489961 TMEM167BQ9NRX6 74 aa7.98□□□□□ -1.13
VPS13D-210ENST00000489961 PPP1R14DQ9NXH3 145 aa7.98□□□□□ -1.13
VPS13D-210ENST00000489961 TP53TG1Q9Y2A0 90 aa7.98□□□□□ -1.13
VPS13D-210ENST00000489961 U3KQK5 164 aa7.98□□□□□ -1.13
VPS13D-210ENST00000489961 A8MTW9 85 aa7.97□□□□□ -1.13
VPS13D-210ENST00000489961 M0R3E3 92 aa7.97□□□□□ -1.13
VPS13D-210ENST00000489961 SPRY2O43597 315 aa7.97□□□□□ -1.13
VPS13D-210ENST00000489961 ZNF705DP0CH99 300 aaPredicted RBP7.97□□□□□ -1.13
VPS13D-210ENST00000489961 ZNF705BP0CI00 300 aaPredicted RBP7.97□□□□□ -1.13
VPS13D-210ENST00000489961 CSN1S1P47710 185 aa7.97□□□□□ -1.13
VPS13D-210ENST00000489961 ZNF726P1Q15940 193 aa7.97□□□□□ -1.13
VPS13D-210ENST00000489961 DPPA3Q6W0C5 159 aa7.97□□□□□ -1.13
VPS13D-210ENST00000489961 RNF183Q96D59 192 aa7.97□□□□□ -1.13
VPS13D-210ENST00000489961 RETNQ9HD89 108 aa7.97□□□□□ -1.13
VPS13D-210ENST00000489961 PRKDCP78527 4128 aaKnown RBP7.96□□□□□ -1.13
VPS13D-210ENST00000489961 MAP1LC3B2A6NCE7 125 aa7.96□□□□□ -1.14
VPS13D-210ENST00000489961 PRAC2D3DTV9 90 aa7.96□□□□□ -1.14
VPS13D-210ENST00000489961 AMBPP02760 352 aa7.96□□□□□ -1.14
VPS13D-210ENST00000489961 RAB5CP51148 216 aa7.96□□□□□ -1.14
VPS13D-210ENST00000489961 NKX2-5P52952 324 aaPredicted RBP7.96□□□□□ -1.14
VPS13D-210ENST00000489961 SSX7Q7RTT5 188 aa7.96□□□□□ -1.14
VPS13D-210ENST00000489961 FAM213BQ8TBF2 198 aa7.96□□□□□ -1.14
VPS13D-210ENST00000489961 OVOL2Q9BRP0 275 aa7.96□□□□□ -1.14
VPS13D-210ENST00000489961 MAP1LC3BQ9GZQ8 125 aa7.96□□□□□ -1.14
VPS13D-210ENST00000489961 SLC35B3Q9H1N7 401 aa7.96□□□□□ -1.14
VPS13D-210ENST00000489961 OTORQ9NRC9 128 aa7.96□□□□□ -1.14
VPS13D-210ENST00000489961 PGPA6NDG6 321 aa7.95□□□□□ -1.14
VPS13D-210ENST00000489961 GIG44P09565 113 aaPredicted RBP7.95□□□□□ -1.14
VPS13D-210ENST00000489961 PRB4P10163 310 aaPredicted RBP7.95□□□□□ -1.14
VPS13D-210ENST00000489961 FHITP49789 147 aa7.95□□□□□ -1.14
VPS13D-210ENST00000489961 FGF8P55075 233 aaPredicted RBP7.95□□□□□ -1.14
VPS13D-210ENST00000489961 FXYD7P58549 80 aa7.95□□□□□ -1.14
VPS13D-210ENST00000489961 CMTM2Q8TAZ6 248 aa7.95□□□□□ -1.14
VPS13D-210ENST00000489961 SUN5Q8TC36 379 aa7.95□□□□□ -1.14
VPS13D-210ENST00000489961 RXFP4Q8TDU9 374 aa7.95□□□□□ -1.14
VPS13D-210ENST00000489961 PLA2G2EQ9NZK7 142 aa7.95□□□□□ -1.14
VPS13D-210ENST00000489961 XCL2Q9UBD3 114 aa7.95□□□□□ -1.14
VPS13D-210ENST00000489961 NPIPB6E9PJ23 425 aa7.94□□□□□ -1.14
VPS13D-210ENST00000489961 BOLA2-SMG1P6H3BVE0 249 aa7.94□□□□□ -1.14
VPS13D-210ENST00000489961 TSPOP30536 169 aa7.94□□□□□ -1.14
VPS13D-210ENST00000489961 SPINK13Q1W4C9 94 aa7.94□□□□□ -1.14
VPS13D-210ENST00000489961 AMTNQ6UX39 209 aa7.94□□□□□ -1.14
VPS13D-210ENST00000489961 SFT2D1Q8WV19 159 aa7.94□□□□□ -1.14
VPS13D-210ENST00000489961 MBD3L1Q8WWY6 194 aa7.94□□□□□ -1.14
VPS13D-210ENST00000489961 LINC00477Q96M19 166 aa7.94□□□□□ -1.14
VPS13D-210ENST00000489961 IGKV2-40A0A087WW87 121 aaPredicted RBP7.93□□□□□ -1.14
VPS13D-210ENST00000489961 A0A1W2PRE2 83 aa7.93□□□□□ -1.14
VPS13D-210ENST00000489961 M0R2Z0 102 aa7.93□□□□□ -1.14
VPS13D-210ENST00000489961 IGKV2D-40P01614 121 aaPredicted RBP7.93□□□□□ -1.14
VPS13D-210ENST00000489961 SLC25A5P05141 298 aaKnown RBP7.93□□□□□ -1.14
VPS13D-210ENST00000489961 H2AFB1P0C5Y9 115 aa7.93□□□□□ -1.14
VPS13D-210ENST00000489961 SULT1A2P50226 295 aa7.93□□□□□ -1.14
VPS13D-210ENST00000489961 TMEM78Q5T7P6 136 aa7.93□□□□□ -1.14
VPS13D-210ENST00000489961 ARL6IP6Q8N6S5 226 aa7.93□□□□□ -1.14
VPS13D-210ENST00000489961 OR11H2Q8NH07 326 aa7.93□□□□□ -1.14
VPS13D-210ENST00000489961 ODF3Q96PU9 254 aa7.93□□□□□ -1.14
VPS13D-210ENST00000489961 RARRES2Q99969 163 aa7.93□□□□□ -1.14
VPS13D-210ENST00000489961 TMPRSS5Q9H3S3 457 aa7.93□□□□□ -1.14
VPS13D-210ENST00000489961 RPH3ALQ9UNE2 315 aa7.93□□□□□ -1.14
VPS13D-210ENST00000489961 GOLT1BQ9Y3E0 138 aa7.93□□□□□ -1.14
VPS13D-210ENST00000489961 RBAKDNA6NC62 111 aa7.92□□□□□ -1.14
VPS13D-210ENST00000489961 DIRC3C9JPN6 131 aa7.92□□□□□ -1.14
VPS13D-210ENST00000489961 TEX46H3BTG2 121 aa7.92□□□□□ -1.14
VPS13D-210ENST00000489961 INSP01308 110 aa7.92□□□□□ -1.14
VPS13D-210ENST00000489961 LEPP41159 167 aa7.92□□□□□ -1.14
VPS13D-210ENST00000489961 CDKN1BP46527 198 aa7.92□□□□□ -1.14
VPS13D-210ENST00000489961 ERCC8Q13216 396 aa7.92□□□□□ -1.14
VPS13D-210ENST00000489961 C9orf47Q6ZRZ4 202 aa7.92□□□□□ -1.14
VPS13D-210ENST00000489961 C5orf17Q8NAS9 161 aa7.92□□□□□ -1.14
VPS13D-210ENST00000489961 CSNK1G2-AS1Q8NCQ2 148 aa7.92□□□□□ -1.14
VPS13D-210ENST00000489961 IGF2BP2-AS1Q96M15 143 aa7.92□□□□□ -1.14
VPS13D-210ENST00000489961 NKX6-2Q9C056 277 aaPredicted RBP7.92□□□□□ -1.14
VPS13D-210ENST00000489961 A0A1B0GV50 99 aa7.91□□□□□ -1.14
VPS13D-210ENST00000489961 SERTM2A0A1B0GWG4 89 aa7.91□□□□□ -1.14
VPS13D-210ENST00000489961 K7EQM0 130 aa7.91□□□□□ -1.14
VPS13D-210ENST00000489961 HBE1P02100 147 aa7.91□□□□□ -1.14
VPS13D-210ENST00000489961 CT45A10P0DMU9 189 aa7.91□□□□□ -1.14
VPS13D-210ENST00000489961 PPT1P50897 306 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms