RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 NDUFAF3Q9BU61 184 aa12.74□□□□□ -0.37
ABCF3-217ENST00000489719 ZNF586Q9NXT0 402 aa12.74□□□□□ -0.37
ABCF3-217ENST00000489719 PLA2G2EQ9NZK7 142 aa12.74□□□□□ -0.37
ABCF3-217ENST00000489719 TIMM9Q9Y5J7 89 aa12.74□□□□□ -0.37
ABCF3-217ENST00000489719 PRAC2D3DTV9 90 aa12.73□□□□□ -0.37
ABCF3-217ENST00000489719 MPC2O95563 127 aa12.73□□□□□ -0.37
ABCF3-217ENST00000489719 PRM2P04554 102 aa12.73□□□□□ -0.37
ABCF3-217ENST00000489719 HIST1H1EP10412 219 aaKnown RBP12.73□□□□□ -0.37
ABCF3-217ENST00000489719 OXA1LQ15070 435 aa12.73□□□□□ -0.37
ABCF3-217ENST00000489719 RPP25LQ8N5L8 163 aaKnown RBP12.73□□□□□ -0.37
ABCF3-217ENST00000489719 KCNIP2Q9NS61 270 aa12.73□□□□□ -0.37
ABCF3-217ENST00000489719 TMEM14CQ9P0S9 112 aa12.73□□□□□ -0.37
ABCF3-217ENST00000489719 TRBV19A0A075B6N1 114 aa12.72□□□□□ -0.37
ABCF3-217ENST00000489719 C17orf112F2Z3M2 114 aa12.72□□□□□ -0.37
ABCF3-217ENST00000489719 ZNF253O75346 499 aa12.72□□□□□ -0.37
ABCF3-217ENST00000489719 HTN1P15515 57 aa12.72□□□□□ -0.37
ABCF3-217ENST00000489719 HTN3P15516 51 aa12.72□□□□□ -0.37
ABCF3-217ENST00000489719 DAD1P61803 113 aa12.72□□□□□ -0.37
ABCF3-217ENST00000489719 GCSAMLQ5JQS6 135 aa12.72□□□□□ -0.37
ABCF3-217ENST00000489719 WDR61Q9GZS3 305 aaKnown RBP12.72□□□□□ -0.37
ABCF3-217ENST00000489719 IFNA5P01569 189 aa12.71□□□□□ -0.37
ABCF3-217ENST00000489719 TAS2R60P59551 318 aa12.71□□□□□ -0.37
ABCF3-217ENST00000489719 SCGB1C1Q8TD33 95 aa12.71□□□□□ -0.37
ABCF3-217ENST00000489719 BLNKQ8WV28 456 aa12.71□□□□□ -0.37
ABCF3-217ENST00000489719 FAM210BQ96KR6 192 aa12.71□□□□□ -0.37
ABCF3-217ENST00000489719 ATP5SQ99766 215 aa12.71□□□□□ -0.37
ABCF3-217ENST00000489719 PRELID1Q9Y255 219 aa12.71□□□□□ -0.37
ABCF3-217ENST00000489719 AZU1P20160 251 aa12.7□□□□□ -0.38
ABCF3-217ENST00000489719 RPL12P30050 165 aaKnown RBP12.7□□□□□ -0.38
ABCF3-217ENST00000489719 MRPL53Q96EL3 112 aaKnown RBP12.7□□□□□ -0.38
ABCF3-217ENST00000489719 HSPB11Q9Y547 144 aa12.7□□□□□ -0.38
ABCF3-217ENST00000489719 LYRM9A8MSI8 78 aa12.69□□□□□ -0.38
ABCF3-217ENST00000489719 H7BYZ3 331 aa12.69□□□□□ -0.38
ABCF3-217ENST00000489719 PYYP10082 97 aa12.69□□□□□ -0.38
ABCF3-217ENST00000489719 PDE6HQ13956 83 aa12.69□□□□□ -0.38
ABCF3-217ENST00000489719 MIR17HGQ75NE6 70 aa12.69□□□□□ -0.38
ABCF3-217ENST00000489719 C20orf144Q9BQM9 153 aa12.69□□□□□ -0.38
ABCF3-217ENST00000489719 OR51M1Q9H341 326 aa12.69□□□□□ -0.38
ABCF3-217ENST00000489719 AAMDCQ9H7C9 122 aa12.69□□□□□ -0.38
ABCF3-217ENST00000489719 NBEAP1P0C6P0 100 aa12.68□□□□□ -0.38
ABCF3-217ENST00000489719 P0DMU3 169 aa12.68□□□□□ -0.38
ABCF3-217ENST00000489719 FAM231AP0DMU4 169 aa12.68□□□□□ -0.38
ABCF3-217ENST00000489719 FAM231CP0DMU5 169 aa12.68□□□□□ -0.38
ABCF3-217ENST00000489719 LEPP41159 167 aa12.68□□□□□ -0.38
ABCF3-217ENST00000489719 CCDC28AQ8IWP9 274 aa12.68□□□□□ -0.38
ABCF3-217ENST00000489719 SLC25A2Q9BXI2 301 aa12.68□□□□□ -0.38
ABCF3-217ENST00000489719 MRPL32Q9BYC8 188 aaKnown RBP12.68□□□□□ -0.38
ABCF3-217ENST00000489719 SMIM3Q9BZL3 60 aa12.68□□□□□ -0.38
ABCF3-217ENST00000489719 MBD2Q9UBB5 411 aa12.68□□□□□ -0.38
ABCF3-217ENST00000489719 ALG5Q9Y673 324 aa12.68□□□□□ -0.38
ABCF3-217ENST00000489719 J3KRW8 73 aa12.67□□□□□ -0.38
ABCF3-217ENST00000489719 NDUFB4O95168 129 aa12.67□□□□□ -0.38
ABCF3-217ENST00000489719 PTTG1O95997 202 aa12.67□□□□□ -0.38
ABCF3-217ENST00000489719 CT45A10P0DMU9 189 aa12.67□□□□□ -0.38
ABCF3-217ENST00000489719 DEFB130BP0DP73 79 aa12.67□□□□□ -0.38
ABCF3-217ENST00000489719 DEFB130AP0DP74 79 aa12.67□□□□□ -0.38
ABCF3-217ENST00000489719 ZNF493Q6ZR52 646 aa12.67□□□□□ -0.38
ABCF3-217ENST00000489719 C16orf74Q96GX8 76 aa12.67□□□□□ -0.38
ABCF3-217ENST00000489719 LINC00477Q96M19 166 aa12.67□□□□□ -0.38
ABCF3-217ENST00000489719 PAXXQ9BUH6 204 aa12.67□□□□□ -0.38
ABCF3-217ENST00000489719 PARD6GQ9BYG4 376 aaPredicted RBP12.67□□□□□ -0.38
ABCF3-217ENST00000489719 FUT9Q9Y231 359 aa12.67□□□□□ -0.38
ABCF3-217ENST00000489719 NPIPB6E9PJ23 425 aa12.66□□□□□ -0.38
ABCF3-217ENST00000489719 M0R3E3 92 aa12.66□□□□□ -0.38
ABCF3-217ENST00000489719 KIR3DS1Q14943 382 aa12.66□□□□□ -0.38
ABCF3-217ENST00000489719 FCN2Q15485 313 aa12.66□□□□□ -0.38
ABCF3-217ENST00000489719 FFAR4Q5NUL3 377 aa12.66□□□□□ -0.38
ABCF3-217ENST00000489719 EXOC3-AS1Q8N2X6 119 aa12.66□□□□□ -0.38
ABCF3-217ENST00000489719 RNF141Q8WVD5 230 aa12.66□□□□□ -0.38
ABCF3-217ENST00000489719 FAM167A-AS1Q96KT0 104 aa12.66□□□□□ -0.38
ABCF3-217ENST00000489719 ODF3Q96PU9 254 aa12.66□□□□□ -0.38
ABCF3-217ENST00000489719 MED28Q9H204 178 aa12.66□□□□□ -0.38
ABCF3-217ENST00000489719 TIMM8BQ9Y5J9 83 aaPredicted RBP12.66□□□□□ -0.38
ABCF3-217ENST00000489719 ERCC8Q13216 396 aa12.65□□□□□ -0.38
ABCF3-217ENST00000489719 ICAM4Q14773 271 aa12.65□□□□□ -0.38
ABCF3-217ENST00000489719 GFI1BQ5VTD9 330 aa12.65□□□□□ -0.38
ABCF3-217ENST00000489719 POM121L12Q8N7R1 296 aa12.65□□□□□ -0.38
ABCF3-217ENST00000489719 EPPK1P58107 5090 aaKnown RBP12.64□□□□□ -0.39
ABCF3-217ENST00000489719 TRAV12-3A0A0B4J271 114 aa12.64□□□□□ -0.39
ABCF3-217ENST00000489719 OR7C2O60412 319 aa12.64□□□□□ -0.39
ABCF3-217ENST00000489719 PLAC8L1A1L4L8 177 aa12.63□□□□□ -0.39
ABCF3-217ENST00000489719 CBY3A6NI87 242 aa12.63□□□□□ -0.39
ABCF3-217ENST00000489719 SLC25A5P05141 298 aaKnown RBP12.63□□□□□ -0.39
ABCF3-217ENST00000489719 OR10J4P0C629 311 aa12.63□□□□□ -0.39
ABCF3-217ENST00000489719 TAS2R45P59539 299 aa12.63□□□□□ -0.39
ABCF3-217ENST00000489719 FAM122CQ6P4D5 195 aa12.63□□□□□ -0.39
ABCF3-217ENST00000489719 TMEM263Q8WUH6 116 aaKnown RBP12.63□□□□□ -0.39
ABCF3-217ENST00000489719 AGPAT4-IT1Q9H0P7 198 aa12.63□□□□□ -0.39
ABCF3-217ENST00000489719 NOP10Q9NPE3 64 aaKnown RBP12.63□□□□□ -0.39
ABCF3-217ENST00000489719 F5H768 121 aa12.62□□□□□ -0.39
ABCF3-217ENST00000489719 CSN1S1P47710 185 aa12.62□□□□□ -0.39
ABCF3-217ENST00000489719 TMEM78Q5T7P6 136 aa12.62□□□□□ -0.39
ABCF3-217ENST00000489719 TMEM88Q6PEY1 159 aa12.62□□□□□ -0.39
ABCF3-217ENST00000489719 UBE2DNLQ8IWF7 75 aa12.62□□□□□ -0.39
ABCF3-217ENST00000489719 FXYD5Q96DB9 178 aa12.62□□□□□ -0.39
ABCF3-217ENST00000489719 WFDC1Q9HC57 220 aa12.62□□□□□ -0.39
ABCF3-217ENST00000489719 VPS13DQ5THJ4 4388 aa12.61□□□□□ -0.39
ABCF3-217ENST00000489719 KMT2AQ03164 3969 aa12.61□□□□□ -0.39
ABCF3-217ENST00000489719 ATP5G1P05496 136 aa12.61□□□□□ -0.39
ABCF3-217ENST00000489719 ATP5G3P48201 142 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms