RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 IGFL4Q6B9Z1 124 aa10.67□□□□□ -0.7
CLDN11-209ENST00000489485 A0A087X0K7 114 aa10.66□□□□□ -0.7
CLDN11-209ENST00000489485 PAGE4O60829 102 aa10.66□□□□□ -0.7
CLDN11-209ENST00000489485 NDUFB4O95168 129 aa10.66□□□□□ -0.7
CLDN11-209ENST00000489485 DCANP1Q8TF63 244 aa10.66□□□□□ -0.7
CLDN11-209ENST00000489485 TUBA4BQ9H853 241 aa10.66□□□□□ -0.7
CLDN11-209ENST00000489485 YTHDF2Q9Y5A9 579 aaKnown RBP10.66□□□□□ -0.7
CLDN11-209ENST00000489485 MEOX2P50222 304 aa10.66□□□□□ -0.7
CLDN11-209ENST00000489485 PPT1P50897 306 aa10.66□□□□□ -0.7
CLDN11-209ENST00000489485 RNF212Q495C1 297 aa10.66□□□□□ -0.7
CLDN11-209ENST00000489485 CST9LP1Q5W188 147 aa10.66□□□□□ -0.7
CLDN11-209ENST00000489485 GTSCR1Q86UQ5 136 aa10.66□□□□□ -0.7
CLDN11-209ENST00000489485 PRR25Q96S07 402 aa10.66□□□□□ -0.7
CLDN11-209ENST00000489485 RARRES2Q99969 163 aa10.66□□□□□ -0.7
CLDN11-209ENST00000489485 EIF5A2Q9GZV4 153 aaKnown RBP10.66□□□□□ -0.7
CLDN11-209ENST00000489485 A6NJY4 79 aa10.65□□□□□ -0.7
CLDN11-209ENST00000489485 K7EQG2 157 aa10.65□□□□□ -0.7
CLDN11-209ENST00000489485 PDE6HQ13956 83 aa10.65□□□□□ -0.7
CLDN11-209ENST00000489485 BEAN1Q3B7T3 259 aa10.65□□□□□ -0.7
CLDN11-209ENST00000489485 EXOC3-AS1Q8N2X6 119 aa10.65□□□□□ -0.7
CLDN11-209ENST00000489485 RXFP4Q8TDU9 374 aa10.65□□□□□ -0.7
CLDN11-209ENST00000489485 C16orf92Q96LL3 132 aa10.65□□□□□ -0.7
CLDN11-209ENST00000489485 CD7P09564 240 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 PRB4P10163 310 aaPredicted RBP10.64□□□□□ -0.71
CLDN11-209ENST00000489485 CD81P60033 236 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 SUMO1P63165 101 aaKnown RBP10.64□□□□□ -0.71
CLDN11-209ENST00000489485 RHEBQ15382 184 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 SLC35B3Q9H1N7 401 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 Q9H3A6 140 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 MANBALQ9NQG1 85 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 ZNF331Q9NQX6 463 aaPredicted RBP10.64□□□□□ -0.71
CLDN11-209ENST00000489485 TRAV2A0A0B4J234 112 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 A0A1W2PRE2 83 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 RBFOX3A6NFN3 312 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 C1orf196B1AJZ1 125 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 IFNA1P01562 189 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 MT-ND4LP03901 98 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 ZNF688P0C7X2 276 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 BCL2P10415 239 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 HLA-DMBP28068 263 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 SNRPD3P62318 126 aaKnown RBP10.64□□□□□ -0.71
CLDN11-209ENST00000489485 PSG9Q00887 426 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 PMS2P11Q13670 270 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 ICAM4Q14773 271 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 FAM24BQ8N5W8 94 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 RNF182Q8N6D2 247 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 RPS10P5Q9NQ39 176 aa10.64□□□□□ -0.71
CLDN11-209ENST00000489485 TRAV8-2A0A0B4J237 113 aa10.63□□□□□ -0.71
CLDN11-209ENST00000489485 PGPA6NDG6 321 aa10.63□□□□□ -0.71
CLDN11-209ENST00000489485 COLCA2A8K830 154 aa10.63□□□□□ -0.71
CLDN11-209ENST00000489485 GGTLC3B5MD39 225 aa10.63□□□□□ -0.71
CLDN11-209ENST00000489485 SOCS3O14543 225 aa10.63□□□□□ -0.71
CLDN11-209ENST00000489485 PRB2P02812 416 aaPredicted RBP10.63□□□□□ -0.71
CLDN11-209ENST00000489485 ID1P41134 155 aa10.63□□□□□ -0.71
CLDN11-209ENST00000489485 ATP5G3P48201 142 aa10.63□□□□□ -0.71
CLDN11-209ENST00000489485 AKR1D1P51857 326 aa10.63□□□□□ -0.71
CLDN11-209ENST00000489485 SLC50A1Q9BRV3 221 aa10.63□□□□□ -0.71
CLDN11-209ENST00000489485 AAMDCQ9H7C9 122 aa10.63□□□□□ -0.71
CLDN11-209ENST00000489485 C11orf94C9JXX5 98 aa10.62□□□□□ -0.71
CLDN11-209ENST00000489485 ISLRO14498 428 aa10.62□□□□□ -0.71
CLDN11-209ENST00000489485 ZNF253O75346 499 aa10.62□□□□□ -0.71
CLDN11-209ENST00000489485 PSMG4Q5JS54 123 aa10.62□□□□□ -0.71
CLDN11-209ENST00000489485 KPRPQ5T749 579 aaPredicted RBP10.62□□□□□ -0.71
CLDN11-209ENST00000489485 SAMD13Q5VXD3 122 aa10.62□□□□□ -0.71
CLDN11-209ENST00000489485 LOC102723971A0A1B0GUV8 181 aa10.61□□□□□ -0.71
CLDN11-209ENST00000489485 C9JQL5 133 aa10.61□□□□□ -0.71
CLDN11-209ENST00000489485 M0R036 132 aa10.61□□□□□ -0.71
CLDN11-209ENST00000489485 M0R3E3 92 aa10.61□□□□□ -0.71
CLDN11-209ENST00000489485 S100A6P06703 90 aa10.61□□□□□ -0.71
CLDN11-209ENST00000489485 MEF2BQ02080 365 aaPredicted RBP10.61□□□□□ -0.71
CLDN11-209ENST00000489485 ODF3L2Q3SX64 289 aa10.61□□□□□ -0.71
CLDN11-209ENST00000489485 ANKRD39Q53RE8 183 aa10.61□□□□□ -0.71
CLDN11-209ENST00000489485 LYPD1Q8N2G4 141 aa10.61□□□□□ -0.71
CLDN11-209ENST00000489485 VAX2Q9UIW0 290 aa10.61□□□□□ -0.71
CLDN11-209ENST00000489485 C7orf77A4D0Y5 90 aa10.61□□□□□ -0.71
CLDN11-209ENST00000489485 ZNF705FA8MVS1 300 aaPredicted RBP10.61□□□□□ -0.71
CLDN11-209ENST00000489485 OR11H12B2RN74 326 aa10.61□□□□□ -0.71
CLDN11-209ENST00000489485 DEFB131AP59861 70 aa10.61□□□□□ -0.71
CLDN11-209ENST00000489485 MAP6D1Q9H9H5 199 aa10.61□□□□□ -0.71
CLDN11-209ENST00000489485 OTORQ9NRC9 128 aa10.61□□□□□ -0.71
CLDN11-209ENST00000489485 ARL2-SNX15V9GYD0 113 aa10.61□□□□□ -0.71
CLDN11-209ENST00000489485 SLC25A5P05141 298 aaKnown RBP10.6□□□□□ -0.71
CLDN11-209ENST00000489485 RPL35P42766 123 aaKnown RBP10.6□□□□□ -0.71
CLDN11-209ENST00000489485 S100A12P80511 92 aa10.6□□□□□ -0.71
CLDN11-209ENST00000489485 ZNF506Q5JVG8 444 aa10.6□□□□□ -0.71
CLDN11-209ENST00000489485 APRG1Q8IVJ8 170 aa10.6□□□□□ -0.71
CLDN11-209ENST00000489485 C20orf173Q96LM9 149 aa10.6□□□□□ -0.71
CLDN11-209ENST00000489485 WFDC10AQ9H1F0 79 aa10.6□□□□□ -0.71
CLDN11-209ENST00000489485 RPH3ALQ9UNE2 315 aa10.6□□□□□ -0.71
CLDN11-209ENST00000489485 TAGLN2P37802 199 aaKnown RBP10.59□□□□□ -0.71
CLDN11-209ENST00000489485 CMC4P56277 68 aaPredicted RBP10.59□□□□□ -0.71
CLDN11-209ENST00000489485 GNG5P63218 68 aa10.59□□□□□ -0.71
CLDN11-209ENST00000489485 ZNF124Q15973 351 aa10.59□□□□□ -0.71
CLDN11-209ENST00000489485 CMTM2Q8TAZ6 248 aa10.59□□□□□ -0.71
CLDN11-209ENST00000489485 DEFB1P60022 68 aa10.59□□□□□ -0.71
CLDN11-209ENST00000489485 PSG3Q16557 428 aa10.59□□□□□ -0.71
CLDN11-209ENST00000489485 SOHLH1Q5JUK2 328 aa10.59□□□□□ -0.71
CLDN11-209ENST00000489485 Q8N1Y9 231 aa10.59□□□□□ -0.71
CLDN11-209ENST00000489485 HIST1H2BAQ96A08 127 aa10.59□□□□□ -0.71
CLDN11-209ENST00000489485 AGRNO00468 2067 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms