RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 TAAR5O14804 337 aa7.34□□□□□ -1.23
HDAC6-233ENST00000489352 PI3P19957 117 aa7.34□□□□□ -1.23
HDAC6-233ENST00000489352 RNASE4P34096 147 aaKnown RBP7.34□□□□□ -1.23
HDAC6-233ENST00000489352 RCVRNP35243 200 aa7.34□□□□□ -1.23
HDAC6-233ENST00000489352 RND3P61587 244 aa7.34□□□□□ -1.23
HDAC6-233ENST00000489352 MEF2DQ14814 521 aa7.34□□□□□ -1.23
HDAC6-233ENST00000489352 AARDQ4LEZ3 155 aa7.34□□□□□ -1.23
HDAC6-233ENST00000489352 DAZ4Q86SG3 579 aaKnown RBP7.34□□□□□ -1.23
HDAC6-233ENST00000489352 OR10P1Q8NGE3 313 aa7.34□□□□□ -1.23
HDAC6-233ENST00000489352 ZNF486Q96H40 463 aaPredicted RBP7.34□□□□□ -1.23
HDAC6-233ENST00000489352 C2orf50Q96LR7 162 aa7.34□□□□□ -1.23
HDAC6-233ENST00000489352 SLC50A1Q9BRV3 221 aa7.34□□□□□ -1.23
HDAC6-233ENST00000489352 SH3BGRL3Q9H299 93 aa7.34□□□□□ -1.23
HDAC6-233ENST00000489352 DAZ3Q9NR90 486 aaKnown RBP7.34□□□□□ -1.23
HDAC6-233ENST00000489352 COPZ2Q9P299 210 aa7.34□□□□□ -1.23
HDAC6-233ENST00000489352 TP53TG3Q9ULZ0 132 aa7.34□□□□□ -1.23
HDAC6-233ENST00000489352 TRDV1A0A1B0GX56 115 aa7.33□□□□□ -1.24
HDAC6-233ENST00000489352 H3BRN7 92 aa7.33□□□□□ -1.24
HDAC6-233ENST00000489352 SEC11BP0C7V7 166 aa7.33□□□□□ -1.24
HDAC6-233ENST00000489352 ATP5IP56385 69 aaPredicted RBP7.33□□□□□ -1.24
HDAC6-233ENST00000489352 LCN15Q6UWW0 184 aa7.33□□□□□ -1.24
HDAC6-233ENST00000489352 OR4C5Q8NGB2 326 aa7.33□□□□□ -1.24
HDAC6-233ENST00000489352 OR1S1Q8NH92 325 aa7.33□□□□□ -1.24
HDAC6-233ENST00000489352 SHANK2-AS3Q9BTD1 123 aa7.33□□□□□ -1.24
HDAC6-233ENST00000489352 C8orf4Q9NR00 106 aa7.33□□□□□ -1.24
HDAC6-233ENST00000489352 PAIP2BQ9ULR5 123 aaKnown RBP7.33□□□□□ -1.24
HDAC6-233ENST00000489352 RNF24Q9Y225 148 aa7.33□□□□□ -1.24
HDAC6-233ENST00000489352 HIGD1AQ9Y241 93 aa7.33□□□□□ -1.24
HDAC6-233ENST00000489352 KIF25-AS1Q9Y6Z4 181 aa7.33□□□□□ -1.24
HDAC6-233ENST00000489352 URGCP-MRPS24S4R325 110 aa7.33□□□□□ -1.24
HDAC6-233ENST00000489352 LINC00854A0A1B0GVQ3 168 aa7.32□□□□□ -1.24
HDAC6-233ENST00000489352 PRAC2D3DTV9 90 aa7.32□□□□□ -1.24
HDAC6-233ENST00000489352 PHOX2AO14813 284 aa7.32□□□□□ -1.24
HDAC6-233ENST00000489352 OR5G3P0C626 314 aa7.32□□□□□ -1.24
HDAC6-233ENST00000489352 CXCL2P19875 107 aa7.32□□□□□ -1.24
HDAC6-233ENST00000489352 RAB11AP62491 216 aa7.32□□□□□ -1.24
HDAC6-233ENST00000489352 CCDC71LQ8N9Z2 235 aa7.32□□□□□ -1.24
HDAC6-233ENST00000489352 OR5H6Q8NGV6 325 aa7.32□□□□□ -1.24
HDAC6-233ENST00000489352 DTD1Q8TEA8 209 aa7.32□□□□□ -1.24
HDAC6-233ENST00000489352 SLC25A38Q96DW6 304 aa7.32□□□□□ -1.24
HDAC6-233ENST00000489352 ZNF331Q9NQX6 463 aaPredicted RBP7.32□□□□□ -1.24
HDAC6-233ENST00000489352 PMS2P5A8MQ11 134 aa7.31□□□□□ -1.24
HDAC6-233ENST00000489352 HYPMO75409 117 aa7.31□□□□□ -1.24
HDAC6-233ENST00000489352 B3GALNT1O75752 331 aa7.31□□□□□ -1.24
HDAC6-233ENST00000489352 GPX1P07203 203 aa7.31□□□□□ -1.24
HDAC6-233ENST00000489352 BTN1A1Q13410 526 aa7.31□□□□□ -1.24
HDAC6-233ENST00000489352 DGAT2L7PQ6IED9 249 aa7.31□□□□□ -1.24
HDAC6-233ENST00000489352 LYSMD2Q8IV50 215 aa7.31□□□□□ -1.24
HDAC6-233ENST00000489352 Q8N3U1 123 aa7.31□□□□□ -1.24
HDAC6-233ENST00000489352 NRG4Q8WWG1 115 aa7.31□□□□□ -1.24
HDAC6-233ENST00000489352 S100A16Q96FQ6 103 aaKnown RBP7.31□□□□□ -1.24
HDAC6-233ENST00000489352 GTSF1LQ9H1H1 148 aa7.31□□□□□ -1.24
HDAC6-233ENST00000489352 TPRKBQ9Y3C4 175 aa7.31□□□□□ -1.24
HDAC6-233ENST00000489352 IGHV1OR15-1A0A075B7D0 117 aa7.3□□□□□ -1.24
HDAC6-233ENST00000489352 TRAV4A0A0B4J268 109 aa7.3□□□□□ -1.24
HDAC6-233ENST00000489352 SNRPCP09234 159 aaKnown RBP7.3□□□□□ -1.24
HDAC6-233ENST00000489352 OR10J4P0C629 311 aa7.3□□□□□ -1.24
HDAC6-233ENST00000489352 CLEC2LP0C7M8 214 aa7.3□□□□□ -1.24
HDAC6-233ENST00000489352 PRSS3P35030 304 aa7.3□□□□□ -1.24
HDAC6-233ENST00000489352 PRR4Q16378 134 aa7.3□□□□□ -1.24
HDAC6-233ENST00000489352 SPINK6Q6UWN8 80 aa7.3□□□□□ -1.24
HDAC6-233ENST00000489352 DPPA3Q6W0C5 159 aa7.3□□□□□ -1.24
HDAC6-233ENST00000489352 PACRGLQ8N7B6 248 aa7.3□□□□□ -1.24
HDAC6-233ENST00000489352 C9orf163Q8N9P6 203 aa7.3□□□□□ -1.24
HDAC6-233ENST00000489352 OR4D10Q8NGI6 311 aa7.3□□□□□ -1.24
HDAC6-233ENST00000489352 PRADC1Q9BSG0 188 aa7.3□□□□□ -1.24
HDAC6-233ENST00000489352 TMEM222Q9H0R3 208 aa7.3□□□□□ -1.24
HDAC6-233ENST00000489352 OR51M1Q9H341 326 aa7.3□□□□□ -1.24
HDAC6-233ENST00000489352 VAX2Q9UIW0 290 aa7.3□□□□□ -1.24
HDAC6-233ENST00000489352 ANAPC10Q9UM13 185 aa7.3□□□□□ -1.24
HDAC6-233ENST00000489352 IGHV3-16A0A0C4DH30 117 aa7.29□□□□□ -1.24
HDAC6-233ENST00000489352 IL5P05113 134 aa7.29□□□□□ -1.24
HDAC6-233ENST00000489352 SULT1A3P0DMM9 295 aa7.29□□□□□ -1.24
HDAC6-233ENST00000489352 SULT1A4P0DMN0 295 aa7.29□□□□□ -1.24
HDAC6-233ENST00000489352 OPCMLQ14982 345 aa7.29□□□□□ -1.24
HDAC6-233ENST00000489352 IZUMO2Q6UXV1 221 aa7.29□□□□□ -1.24
HDAC6-233ENST00000489352 GTSF1Q8WW33 167 aa7.29□□□□□ -1.24
HDAC6-233ENST00000489352 RASL10AQ92737 203 aa7.29□□□□□ -1.24
HDAC6-233ENST00000489352 NDUFB11Q9NX14 153 aa7.29□□□□□ -1.24
HDAC6-233ENST00000489352 TRAV26-2A0A0B4J265 109 aa7.28□□□□□ -1.24
HDAC6-233ENST00000489352 TNFAIP8O95379 198 aa7.28□□□□□ -1.24
HDAC6-233ENST00000489352 CDS2O95674 445 aa7.28□□□□□ -1.24
HDAC6-233ENST00000489352 AKR1C1Q04828 323 aa7.28□□□□□ -1.24
HDAC6-233ENST00000489352 RAB31Q13636 194 aa7.28□□□□□ -1.24
HDAC6-233ENST00000489352 TMEM182Q6ZP80 229 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-233ENST00000489352 ZFAND1Q8TCF1 268 aa7.28□□□□□ -1.24
HDAC6-233ENST00000489352 RNF185Q96GF1 192 aa7.28□□□□□ -1.24
HDAC6-233ENST00000489352 SPXQ9BT56 116 aa7.28□□□□□ -1.24
HDAC6-233ENST00000489352 RBKSQ9H477 322 aa7.28□□□□□ -1.24
HDAC6-233ENST00000489352 Q9H521 79 aa7.28□□□□□ -1.24
HDAC6-233ENST00000489352 PXMP4Q9Y6I8 212 aa7.28□□□□□ -1.24
HDAC6-233ENST00000489352 FAM231BA6NCW3 169 aa7.27□□□□□ -1.25
HDAC6-233ENST00000489352 KLLNB2CW77 178 aa7.27□□□□□ -1.25
HDAC6-233ENST00000489352 MXD1Q05195 221 aa7.27□□□□□ -1.25
HDAC6-233ENST00000489352 SDIM1Q6ZPB5 146 aa7.27□□□□□ -1.25
HDAC6-233ENST00000489352 ACOT7LQ6ZUV0 252 aa7.27□□□□□ -1.25
HDAC6-233ENST00000489352 UBE2WQ96B02 151 aa7.27□□□□□ -1.25
HDAC6-233ENST00000489352 KLK12Q9UKR0 248 aa7.27□□□□□ -1.25
HDAC6-233ENST00000489352 RAB26Q9ULW5 256 aa7.27□□□□□ -1.25
HDAC6-233ENST00000489352 A0A087WYN8 130 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 447.1 ms