RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 MGST1P10620 155 aaKnown RBP13.74□□□□□ -0.21
CD40-206ENST00000489304 FOLR2P14207 255 aa13.74□□□□□ -0.21
CD40-206ENST00000489304 RAB5AP20339 215 aa13.74□□□□□ -0.21
CD40-206ENST00000489304 NHLRC2Q8NBF2 726 aa13.74□□□□□ -0.21
CD40-206ENST00000489304 IMMP2LQ96T52 175 aa13.74□□□□□ -0.21
CD40-206ENST00000489304 SETXQ7Z333 2677 aaKnown RBP13.74□□□□□ -0.21
CD40-206ENST00000489304 TRBV24-1A0A075B6N3 115 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 HAX1O00165 279 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 CHEK1O14757 476 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 NDUFA7O95182 113 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 CXCL1P09341 107 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 CD28P10747 220 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 S100PP25815 95 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 ERVFC1-1P60608 527 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 PSG3Q16557 428 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 C4orf3Q8WVX3 66 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 WFDC12Q8WWY7 111 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 RHPN1-AS1Q9BWJ2 59 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 TRAV8-1A0A0A6YYK1 113 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 TGIF2-C20orf24A0A0A6YYL0 155 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 A8MWP6 167 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 FLI1Q01543 452 aaPredicted RBP13.73□□□□□ -0.21
CD40-206ENST00000489304 IGFL4Q6B9Z1 124 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 C8orf86Q6ZUL3 223 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 FAM231DQ6ZW35 169 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 PYGO2Q9BRQ0 406 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 V9GYV3 84 aa13.73□□□□□ -0.21
CD40-206ENST00000489304 TRAV8-2A0A0B4J237 113 aa13.72□□□□□ -0.21
CD40-206ENST00000489304 EDN2P20800 178 aa13.72□□□□□ -0.21
CD40-206ENST00000489304 HLA-DMBP28068 263 aa13.72□□□□□ -0.21
CD40-206ENST00000489304 HOXD3P31249 432 aaPredicted RBP13.72□□□□□ -0.21
CD40-206ENST00000489304 DEFB136Q30KP8 78 aa13.72□□□□□ -0.21
CD40-206ENST00000489304 KHDC1LQ5JSQ8 128 aa13.72□□□□□ -0.21
CD40-206ENST00000489304 RNASE7Q9H1E1 156 aaKnown RBP13.72□□□□□ -0.21
CD40-206ENST00000489304 CLEC5AQ9NY25 188 aa13.72□□□□□ -0.21
CD40-206ENST00000489304 PSG8Q9UQ74 426 aa13.72□□□□□ -0.21
CD40-206ENST00000489304 ZFP30Q9Y2G7 519 aa13.72□□□□□ -0.21
CD40-206ENST00000489304 TMEM213A2RRL7 107 aa13.71□□□□□ -0.21
CD40-206ENST00000489304 FBLL1A6NHQ2 334 aaKnown RBP13.71□□□□□ -0.21
CD40-206ENST00000489304 FOXL1Q12952 345 aa13.71□□□□□ -0.21
CD40-206ENST00000489304 LCN12Q6JVE5 192 aa13.71□□□□□ -0.21
CD40-206ENST00000489304 TMEM183AQ8IXX5 376 aa13.71□□□□□ -0.21
CD40-206ENST00000489304 MRPL53Q96EL3 112 aaKnown RBP13.71□□□□□ -0.21
CD40-206ENST00000489304 BIN3Q9NQY0 253 aa13.71□□□□□ -0.21
CD40-206ENST00000489304 BMI1P35226 326 aa13.7□□□□□ -0.22
CD40-206ENST00000489304 KLF5Q13887 457 aaPredicted RBP13.7□□□□□ -0.22
CD40-206ENST00000489304 IBA57Q5T440 356 aaKnown RBP13.7□□□□□ -0.22
CD40-206ENST00000489304 KCNIP4Q6PIL6 250 aa13.7□□□□□ -0.22
CD40-206ENST00000489304 PRNTQ86SH4 94 aa13.7□□□□□ -0.22
CD40-206ENST00000489304 C1QL4Q86Z23 238 aa13.7□□□□□ -0.22
CD40-206ENST00000489304 DUX3Q96PT4 197 aa13.7□□□□□ -0.22
CD40-206ENST00000489304 RNF114Q9Y508 228 aa13.7□□□□□ -0.22
CD40-206ENST00000489304 F8P00451 2351 aa13.7□□□□□ -0.22
CD40-206ENST00000489304 SYNJ2BPP57105 145 aa13.7□□□□□ -0.22
CD40-206ENST00000489304 FAM210BQ96KR6 192 aa13.7□□□□□ -0.22
CD40-206ENST00000489304 IL36BQ9NZH7 164 aa13.7□□□□□ -0.22
CD40-206ENST00000489304 ZNF492Q9P255 531 aa13.7□□□□□ -0.22
CD40-206ENST00000489304 ZNF705FA8MVS1 300 aaPredicted RBP13.69□□□□□ -0.22
CD40-206ENST00000489304 PROK1P58294 105 aa13.69□□□□□ -0.22
CD40-206ENST00000489304 RNF182Q8N6D2 247 aa13.69□□□□□ -0.22
CD40-206ENST00000489304 SELENOKQ9Y6D0 94 aa13.69□□□□□ -0.22
CD40-206ENST00000489304 IGKV2-40A0A087WW87 121 aaPredicted RBP13.68□□□□□ -0.22
CD40-206ENST00000489304 A0A1W2PRX2 142 aa13.68□□□□□ -0.22
CD40-206ENST00000489304 RBAKDNA6NC62 111 aa13.68□□□□□ -0.22
CD40-206ENST00000489304 LINC01619G3V211 115 aa13.68□□□□□ -0.22
CD40-206ENST00000489304 SOCS3O14543 225 aa13.68□□□□□ -0.22
CD40-206ENST00000489304 IGKV2D-40P01614 121 aaPredicted RBP13.68□□□□□ -0.22
CD40-206ENST00000489304 KRTAP10-3P60369 221 aa13.68□□□□□ -0.22
CD40-206ENST00000489304 KLHL30-AS1Q8NEE0 82 aa13.68□□□□□ -0.22
CD40-206ENST00000489304 C16orf92Q96LL3 132 aa13.68□□□□□ -0.22
CD40-206ENST00000489304 CITED2Q99967 270 aaPredicted RBP13.68□□□□□ -0.22
CD40-206ENST00000489304 NRN1Q9NPD7 142 aa13.68□□□□□ -0.22
CD40-206ENST00000489304 MLXQ9UH92 298 aa13.68□□□□□ -0.22
CD40-206ENST00000489304 PRB4P10163 310 aaPredicted RBP13.67□□□□□ -0.22
CD40-206ENST00000489304 SLURP1P55000 103 aa13.67□□□□□ -0.22
CD40-206ENST00000489304 NUDT10Q8NFP7 164 aa13.67□□□□□ -0.22
CD40-206ENST00000489304 OR1N2Q8NGR9 330 aa13.67□□□□□ -0.22
CD40-206ENST00000489304 NUDT11Q96G61 164 aa13.67□□□□□ -0.22
CD40-206ENST00000489304 TRAV9-1A0A075B6T8 112 aa13.67□□□□□ -0.22
CD40-206ENST00000489304 C19orf71A6NCJ1 209 aa13.67□□□□□ -0.22
CD40-206ENST00000489304 FAM3BP58499 235 aaPredicted RBP13.67□□□□□ -0.22
CD40-206ENST00000489304 PRR27Q6MZM9 219 aa13.67□□□□□ -0.22
CD40-206ENST00000489304 DPF1Q92782 380 aa13.67□□□□□ -0.22
CD40-206ENST00000489304 BTF3L4Q96K17 158 aa13.67□□□□□ -0.22
CD40-206ENST00000489304 A0A1W2PPQ1 181 aa13.66□□□□□ -0.22
CD40-206ENST00000489304 PRAC2D3DTV9 90 aa13.66□□□□□ -0.22
CD40-206ENST00000489304 GATCO43716 136 aaKnown RBP13.66□□□□□ -0.22
CD40-206ENST00000489304 RPS10P46783 165 aaKnown RBP13.66□□□□□ -0.22
CD40-206ENST00000489304 LINC00322Q6ZN03 302 aaPredicted RBP13.66□□□□□ -0.22
CD40-206ENST00000489304 TCF24Q7RTU0 167 aa13.66□□□□□ -0.22
CD40-206ENST00000489304 COX8CQ7Z4L0 72 aa13.66□□□□□ -0.22
CD40-206ENST00000489304 OR11H1Q8NG94 326 aa13.66□□□□□ -0.22
CD40-206ENST00000489304 VGLL1Q99990 258 aa13.66□□□□□ -0.22
CD40-206ENST00000489304 C2orf70A6NJV1 201 aa13.65□□□□□ -0.22
CD40-206ENST00000489304 ZNF705GA8MUZ8 300 aaPredicted RBP13.65□□□□□ -0.22
CD40-206ENST00000489304 TYMSP04818 313 aa13.65□□□□□ -0.22
CD40-206ENST00000489304 RPL11P62913 178 aaKnown RBP13.65□□□□□ -0.22
CD40-206ENST00000489304 SAPCD1Q5SSQ6 148 aa13.65□□□□□ -0.22
CD40-206ENST00000489304 ZC2HC1AQ96GY0 325 aa13.65□□□□□ -0.22
CD40-206ENST00000489304 C1orf196B1AJZ1 125 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms