RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 SH3BGRL3Q9H299 93 aa6.04□□□□□ -1.44
TRAPPC12-221ENST00000489032 TMEM231Q9H6L2 316 aa6.04□□□□□ -1.44
TRAPPC12-221ENST00000489032 UQCC1Q9NVA1 299 aa6.04□□□□□ -1.44
TRAPPC12-221ENST00000489032 TECRQ9NZ01 308 aaKnown RBP6.04□□□□□ -1.44
TRAPPC12-221ENST00000489032 MRPL27Q9P0M9 148 aaKnown RBP6.04□□□□□ -1.44
TRAPPC12-221ENST00000489032 TIMM9Q9Y5J7 89 aa6.04□□□□□ -1.44
TRAPPC12-221ENST00000489032 PUS1Q9Y606 427 aaKnown RBP eCLIP6.04□□□□□ -1.44
TRAPPC12-221ENST00000489032 IGLV5-45A0A087WSX0 123 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 MPDU1O75352 247 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 MBP02144 154 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 IGLC1P0CG04 106 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 RD3LP0DJH9 198 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 FOLR2P14207 255 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 CBLN1P23435 193 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 YPEL3P61236 119 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 DLK1P80370 383 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 EGFEM1PQ0D2K5 195 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 GAMTQ14353 236 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 PEA15Q15121 130 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 VWC2Q2TAL6 325 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 TIGITQ495A1 244 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 LCN12Q6JVE5 192 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 TOMM20LQ6UXN7 152 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 UNQ9165/PRO28630Q6UXU0 137 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 LYPD6BQ8NI32 183 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 FAM213BQ8TBF2 198 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 METTL26Q96S19 204 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 WDR61Q9GZS3 305 aaKnown RBP6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 TREM1Q9NP99 234 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 KCNIP2Q9NS61 270 aa6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 MRPL36Q9P0J6 103 aaKnown RBP6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 ZNF256Q9Y2P7 627 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC12-221ENST00000489032 IGHV3OR16-8A0A075B7F1 116 aa6.02□□□□□ -1.45
TRAPPC12-221ENST00000489032 UBE2L5PA0A1B0GUS4 154 aa6.02□□□□□ -1.45
TRAPPC12-221ENST00000489032 TMEM213A2RRL7 107 aa6.02□□□□□ -1.45
TRAPPC12-221ENST00000489032 FNDC10F2Z333 226 aa6.02□□□□□ -1.45
TRAPPC12-221ENST00000489032 ZNF207O43670 478 aaKnown RBP6.02□□□□□ -1.45
TRAPPC12-221ENST00000489032 IGLV1-51P01701 117 aa6.02□□□□□ -1.45
TRAPPC12-221ENST00000489032 NPPCP23582 126 aa6.02□□□□□ -1.45
TRAPPC12-221ENST00000489032 S100A7P31151 101 aa6.02□□□□□ -1.45
TRAPPC12-221ENST00000489032 ARL16Q0P5N6 197 aa6.02□□□□□ -1.45
TRAPPC12-221ENST00000489032 RAB31Q13636 194 aa6.02□□□□□ -1.45
TRAPPC12-221ENST00000489032 RBPMS2Q6ZRY4 209 aaKnown RBP6.02□□□□□ -1.45
TRAPPC12-221ENST00000489032 BPIFCQ8NFQ6 507 aa6.02□□□□□ -1.45
TRAPPC12-221ENST00000489032 TRGV9Q99603 122 aa6.02□□□□□ -1.45
TRAPPC12-221ENST00000489032 SMDT1Q9H4I9 107 aa6.02□□□□□ -1.45
TRAPPC12-221ENST00000489032 NPVFQ9HCQ7 196 aa6.02□□□□□ -1.45
TRAPPC12-221ENST00000489032 TRAV1-1A0A0B4J248 108 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 TRAV25A0A0B4J276 109 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 IGHV7-4-1A0A0J9YVY3 117 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 TMEM218A2RU14 115 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 RBMY1BA6NDE4 496 aaKnown RBP6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 RBMY1EA6NEQ0 496 aaKnown RBP6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 PMS2P5A8MQ11 134 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 IGKV1-17P01599 117 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 CD5P06127 495 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 RBMY1DP0C7P1 496 aaKnown RBP6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 C8orf88P0DMB2 117 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 GP9P14770 177 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 FGF7P21781 194 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 RPL24P83731 157 aaKnown RBP6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 GUCA2BQ16661 112 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 DEFB114Q30KQ6 69 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 TMEM41BQ5BJD5 291 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 TMEM144Q7Z5S9 345 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 S100A7AQ86SG5 101 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 GTSCR1Q86UQ5 136 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 THAP8Q8NA92 274 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 OR51G1Q8NGK1 321 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 LINC00052Q96N35 136 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 RHPN1-AS1Q9BWJ2 59 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 SMPXQ9UHP9 88 aa6.01□□□□□ -1.45
TRAPPC12-221ENST00000489032 PRSS46E5RG02 174 aa6□□□□□ -1.45
TRAPPC12-221ENST00000489032 AGPAT2O15120 278 aa6□□□□□ -1.45
TRAPPC12-221ENST00000489032 IL4P05112 153 aa6□□□□□ -1.45
TRAPPC12-221ENST00000489032 SELENOTP62341 195 aa6□□□□□ -1.45
TRAPPC12-221ENST00000489032 PAFAH1B2P68402 229 aa6□□□□□ -1.45
TRAPPC12-221ENST00000489032 GUK1Q16774 197 aa6□□□□□ -1.45
TRAPPC12-221ENST00000489032 NFE4Q86UQ8 179 aa6□□□□□ -1.45
TRAPPC12-221ENST00000489032 SVBPQ8N300 66 aa6□□□□□ -1.45
TRAPPC12-221ENST00000489032 SFT2D1Q8WV19 159 aa6□□□□□ -1.45
TRAPPC12-221ENST00000489032 RSG1Q9BU20 258 aa6□□□□□ -1.45
TRAPPC12-221ENST00000489032 SEC11CQ9BY50 192 aa6□□□□□ -1.45
TRAPPC12-221ENST00000489032 EIF5A2Q9GZV4 153 aaKnown RBP6□□□□□ -1.45
TRAPPC12-221ENST00000489032 RABAC1Q9UI14 185 aa6□□□□□ -1.45
TRAPPC12-221ENST00000489032 WDR83OSQ9Y284 106 aa6□□□□□ -1.45
TRAPPC12-221ENST00000489032 LYSTQ99698 3801 aa5.99□□□□□ -1.45
TRAPPC12-221ENST00000489032 DNAH1Q9P2D7 4330 aa5.99□□□□□ -1.45
TRAPPC12-221ENST00000489032 IGHV3-49A0A0A0MS15 119 aa5.99□□□□□ -1.45
TRAPPC12-221ENST00000489032 F8W036 122 aa5.99□□□□□ -1.45
TRAPPC12-221ENST00000489032 CHEK1O14757 476 aa5.99□□□□□ -1.45
TRAPPC12-221ENST00000489032 IFNA1P01562 189 aa5.99□□□□□ -1.45
TRAPPC12-221ENST00000489032 APOC3P02656 99 aa5.99□□□□□ -1.45
TRAPPC12-221ENST00000489032 TAGLN2P37802 199 aaKnown RBP5.99□□□□□ -1.45
TRAPPC12-221ENST00000489032 FHITP49789 147 aa5.99□□□□□ -1.45
TRAPPC12-221ENST00000489032 LYZP61626 148 aa5.99□□□□□ -1.45
TRAPPC12-221ENST00000489032 ZNF90Q03938 601 aa5.99□□□□□ -1.45
TRAPPC12-221ENST00000489032 ACOT6Q3I5F7 207 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC12-221ENST00000489032 ADAMTSL5Q6ZMM2 481 aa5.99□□□□□ -1.45
TRAPPC12-221ENST00000489032 CYP2G1PQ6ZSU1 146 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 226.1 ms